Veme007480.1
Basic Information
- Insect
- Vollenhovia emeryi
- Gene Symbol
- -
- Assembly
- GCA_000949405.1
- Location
- NW:1050499-1060778[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.00013 0.074 12.7 1.5 5 43 10 45 8 46 0.93 2 23 0.023 13 5.5 5.5 16 44 69 98 60 98 0.90 3 23 0.00076 0.42 10.3 1.6 12 42 117 149 109 149 0.85 4 23 0.0091 5.1 6.8 0.5 14 29 168 183 158 200 0.78 5 23 2.4e-05 0.013 15.1 1.0 9 40 226 258 219 279 0.87 6 23 0.0069 3.9 7.2 1.0 17 40 291 316 284 320 0.91 7 23 0.0061 3.4 7.4 1.1 13 41 345 375 336 377 0.83 8 23 0.00068 0.38 10.4 0.6 13 40 402 431 393 435 0.85 9 23 3.6e-07 0.0002 20.9 1.7 7 42 460 494 454 494 0.85 10 23 0.094 52 3.6 0.1 15 40 525 552 514 555 0.74 11 23 1.2 6.5e+02 0.1 0.3 16 40 583 609 577 612 0.74 12 23 1.6e-05 0.0088 15.6 1.0 12 42 639 670 632 671 0.86 13 23 0.1 56 3.5 0.8 7 29 696 715 690 731 0.70 14 23 0.017 9.2 6.0 1.2 1 38 750 786 750 791 0.84 15 23 0.016 8.8 6.0 0.7 9 41 818 849 810 851 0.78 16 23 0.045 25 4.6 0.8 16 40 883 909 871 912 0.88 17 23 0.00051 0.28 10.8 1.4 1 40 931 969 931 971 0.90 18 23 6.2e-06 0.0035 16.9 0.4 7 40 997 1029 991 1032 0.83 19 23 3.8e-05 0.021 14.4 0.1 13 40 1060 1090 1051 1093 0.85 20 23 9.6e-05 0.053 13.1 0.8 14 42 1122 1152 1110 1153 0.88 21 23 0.56 3.1e+02 1.1 1.1 13 43 1181 1213 1174 1214 0.79 22 23 1.2 6.8e+02 -0.0 0.2 13 25 1238 1250 1229 1269 0.77 23 23 7.3e-06 0.0041 16.7 0.6 12 42 1297 1329 1289 1330 0.87
Sequence Information
- Coding Sequence
- ATGGAAGTTGAAGAATGGCTACGGAAACATTACACACAAGAATGTCCTAATACAGTAAAGTGTAACCGTTGTGatgaaattttttctaatcaGAACAGACtgcaaatcttaaaatatCACTTATATGAAGATCATGAAATAACAGAATTAGATGGGCATCCAGAACGTGAAATCATAcagcaaaattataaaataacatgtCTAACAGCAACATGTAATCATTGTAGACGAAAAAGTAACCTTGCCATTTAtggtgtacatattttaataattcatttaaGAACTATTCATTcggataaatataatttaatgaagAGAAGAAGATCACGTATATGGgaaaaatacgataaaacagacgacaAGGCAATATGCAAACAATGTAAAacagcaataaaaataaatagtaaaatacctacgaaaaatttaaatgttcaCCTACGTCATTGTCGGTTAAACAAGGTACGAAAAATATCACACCTATGGGACAAGTTCAATGTGATGGAAAACAAGGCTACATGCAAGGAATGTAAGAGAACAATATCAATAAATAGTCAATATCCTAGAATAGAATTAACACAacatttaatactttattgTCGttattttaaaaattaccaCCTGGACAAATGTAAGTTAAAAGAGATGCAAAGAAGATCACGCATATGGAACAAATACGAGGTGACTGACAACAAAGCAACATGCAGAAAATGTAAAGGAACAATAACAATAAACAGTGACACTGCTACAACAGATTTAAGTGAACACTTACTTCAATGTCGCTACTCATATATTGACAACCTAAGTATAggtaaattaaagaatttacgAAGATCACACATATGGGAAAAGTTTGATTGTAATGGAGACGGTGCGACATGCAAGCAATGTAAAAGAAACCTGGTAATAAGTGGTACACGACCAATATCATATTTACGAAGTCACTTAAAATATTGTCGAAGCGGCTTAAATACAACTGAAGATGAGTTGAAAAAGTTGCGAAGAAGATCATTAATATGGGAAAAGTTTGACGAAGAGGGAAACATGGCAATATGCAAGCAATGTAAAAGAACAGTGTCCATAAACAAAACACATCCAACTATATATTTACGAAtgcacttaaaaaattgtcgCGGTTTAAATATAACCAAAGATGAGATGAAGAAGTTACGAAGAAGATCAGTAATATGGGAGAAGTTTGATGAAGAAGGAAACAAGACGATATGCAAGCAATGTAAAAGAACAGTGTCCATAAATGAAACACAACCAACTACATATTTACGGAGGCACTTAAACTATTGTCGAAGCGGCTTCAATCTTGATGCACCAAAGGTAGATACGTTCAAGAAATCACAAAGAAGATCACTAATATGGGAGAAGTTCGATGAAGAGGAAAACAGGGCTACATGCAAACAATGTAAAAAAACACTGTCAATAAGTGGTAAACAAGCAATACTAAATTTGCGGAGACACTTAAAATGTTGTAGCGGTGTAAATCTCAATGAGCTAAGTGAAGATGAGTTGAAGAAGCTACAAAGAAGATCAGTAGTATGGGAGAAGTTTGATGAAGAGGGAGACACGGCTATATGCAAACAATGTAAAAAATCACTGACAATAAATGATAAACAGCCATTAGTAAGTTTACGGCAACacttaaaattttgtcgCGGCTTATACCTAGATGAGGATGAGTTGAAGAAGTTACGAAGAAAATCACAAATATGGGAAAAGTTTCATGTATATGGAGACAGGGCAACATGCAAGCAATGTAAAAGAACAGTGTTAGTAAGTGATACACGACCAGCAGCATATTTACGGAGGCATTTACAATATTGTCGAAGCGGTTTAAATCTAGATGAACAAAATAAAGTTGGGatgaaaaaattacgaaaaggAGAAATATGGGAGAAGTTTGATAAAGAAGATAACATGGCAATATGCAAGCAATGTAAAAAACCTATAAAATTGGGTTCTAATTATTCAAGCAAGTTACGTCAACATTTGTCTTGTTGCCGGGGCTTAAATCTTAATGACCTAAGTGAAGATGAGTTAAAGAAGTTACGAAGGAAATCACAAATATGGGAAAAGTTCGATGAAAACGGAGACCGCGCAACATGCAAACAATgtacaaaaacaattaaaatgcaGCCTAAGAATAAAGCAGCAAGTTTACATCTTCATTTACATTATTGTCGCGGCTCAAATCTTAATGATGCAAGCAAAGATGAGTTGAAGAAGTCACGAAGAACATCGAAGATATGGGAAAAGTTTTATGATAATGGAGACATTGCTACATGCAAACAATgtacaaaaacaattaaattgaagccaaatcaagaaatatcatatttatattatcattttcatGCTTGTCGCGGCGTAAATCTTAATGATCTAAGTAAAGATGAGTTGAAGAAATTACGAAGAAGATCACAAGTGTGGGGAAAGTTTGATATTAATGGAGACAGTGCTACATGCAAACAATgtacaaaaacaattaaagTAAAGCCAAATCGAGAATTAATGAGTTTCCATTATCATTTACGTAATTGTCGTGGCTCCAATTTTTATGAACTGAGTAAATATAAGTTGAAGAAATTACCAAGGAGAAAATCACAAACGTGGGAAAAATTCGAAGATAATGGAGACACTGCGACATGCAAACAATgtacaaaaacaattaaacTGCAGCCTAAAAAACAAGTAGCAAGTTTACATCatcatttaaattattgtcGcGGCGTAAATCTTAAAGGCGTAACAAAAGATGAGCTGAGAAAGTTAAGAAGAAGATCAAAAATATGGGAAAAGTTCGATGATAATGGAAACAGTGCTACATGTAAACAATgtacaaaaacaattaaacTGAAGCCAGGTCATGAAGTATCAAGTTTACATTTCCATATACGTTATTGTCGCGGCTTAGATCTTAGTGAACTAAATGAAGATGAGTTGAAGAAGTTACGAAGAAGATCAGTAGTATGGGAGAAGTTTGATGAAGAGGGAGACAAGGCTATATGCAAGCTATGTAAAAAAACACTTTCACTAAGTTGTAAAGAACCAGTAACAAATTTACGGATCCACTTACAATATTGTCgCGGCTTAAATCTTGGTGAACTAAATAACGATGAGTTAAAGAAATTACGAAGAAGGTCAGTAATATGGGAGAAGTTTGATGAAGATGGAGACAATGCTGTATGCAAACAATGTCAAAAAACACTGTTAATAAGTGATAAAAAACAACCCGTAACAAATTTGCGGAGCCACTTAAAATATTGTCGCGGTTACAGTATTGGTAAAGTAAATGAAGATAAGTTAAAAAAGTTAGGAAGGAGATCACATATATGGTTGAAGTTTGTTGAAGAGGGAAACAGGGCGATATGCAagcaatgtaaaaaaaaagtgttaatAAGTGGTGCACGACCAGCATCAAATTTATGGAGCCACTTACAACATTGTCGGAGCTCAAATATTACTGAACTAAATAAAGATAAGGTGAAGAAGTCACGGAAAAAACCACAAATATGGGAAAAGTTTCATGTAGATGGAAACAGGGCAACATGCAAGCAATGTAAAGGAACAGTGTTAATAAGTGATACACAACCAGCAGTAGATTTACGGAAGCACTTACGATTATGTCAcTGCTTAAATCTAAATGAAGATGAATTGAAGAAGTCACGAAGAAGATCACAAATATGGGAAAAGTTTTATGTAGATGGAAACAGGGCAATATGCAAGCAATGTAAAAGAACAGTGTTAGTAAGTGATATACAACCAGCAATATATTTACGGGTGCACTTACGACATTGTCGCGGCTTAAATCTTCATGGTCAAAGTAAAGATGAGTTGAAGAAAGTACCAATAAGACTAGAAATATGGGAGAAATTTGATAAAGATGGAAACAGGGCAATATGCAAGCTATGTAGAAAATCTCTATCAATAAGTGGAAGAGATCCAAAATCAAATTTACGGAGTCACTTAGCATGTTGTCGCGGCAAATCTTGCGATAAATGA
- Protein Sequence
- MEVEEWLRKHYTQECPNTVKCNRCDEIFSNQNRLQILKYHLYEDHEITELDGHPEREIIQQNYKITCLTATCNHCRRKSNLAIYGVHILIIHLRTIHSDKYNLMKRRRSRIWEKYDKTDDKAICKQCKTAIKINSKIPTKNLNVHLRHCRLNKVRKISHLWDKFNVMENKATCKECKRTISINSQYPRIELTQHLILYCRYFKNYHLDKCKLKEMQRRSRIWNKYEVTDNKATCRKCKGTITINSDTATTDLSEHLLQCRYSYIDNLSIGKLKNLRRSHIWEKFDCNGDGATCKQCKRNLVISGTRPISYLRSHLKYCRSGLNTTEDELKKLRRRSLIWEKFDEEGNMAICKQCKRTVSINKTHPTIYLRMHLKNCRGLNITKDEMKKLRRRSVIWEKFDEEGNKTICKQCKRTVSINETQPTTYLRRHLNYCRSGFNLDAPKVDTFKKSQRRSLIWEKFDEEENRATCKQCKKTLSISGKQAILNLRRHLKCCSGVNLNELSEDELKKLQRRSVVWEKFDEEGDTAICKQCKKSLTINDKQPLVSLRQHLKFCRGLYLDEDELKKLRRKSQIWEKFHVYGDRATCKQCKRTVLVSDTRPAAYLRRHLQYCRSGLNLDEQNKVGMKKLRKGEIWEKFDKEDNMAICKQCKKPIKLGSNYSSKLRQHLSCCRGLNLNDLSEDELKKLRRKSQIWEKFDENGDRATCKQCTKTIKMQPKNKAASLHLHLHYCRGSNLNDASKDELKKSRRTSKIWEKFYDNGDIATCKQCTKTIKLKPNQEISYLYYHFHACRGVNLNDLSKDELKKLRRRSQVWGKFDINGDSATCKQCTKTIKVKPNRELMSFHYHLRNCRGSNFYELSKYKLKKLPRRKSQTWEKFEDNGDTATCKQCTKTIKLQPKKQVASLHHHLNYCRGVNLKGVTKDELRKLRRRSKIWEKFDDNGNSATCKQCTKTIKLKPGHEVSSLHFHIRYCRGLDLSELNEDELKKLRRRSVVWEKFDEEGDKAICKLCKKTLSLSCKEPVTNLRIHLQYCRGLNLGELNNDELKKLRRRSVIWEKFDEDGDNAVCKQCQKTLLISDKKQPVTNLRSHLKYCRGYSIGKVNEDKLKKLGRRSHIWLKFVEEGNRAICKQCKKKVLISGARPASNLWSHLQHCRSSNITELNKDKVKKSRKKPQIWEKFHVDGNRATCKQCKGTVLISDTQPAVDLRKHLRLCHCLNLNEDELKKSRRRSQIWEKFYVDGNRAICKQCKRTVLVSDIQPAIYLRVHLRHCRGLNLHGQSKDELKKVPIRLEIWEKFDKDGNRAICKLCRKSLSISGRDPKSNLRSHLACCRGKSCDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -