Basic Information

Gene Symbol
-
Assembly
GCA_000949405.1
Location
NW:55686-62313[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.7 3.3e+03 -2.1 0.0 21 31 1070 1080 1060 1084 0.81
2 2 7.1e-09 6.4e-06 25.8 0.1 2 46 1430 1476 1429 1476 0.92

Sequence Information

Coding Sequence
ATGGACGAGTCCGCGAACGAGCCGGCGGAGAACGGCGCGGACGCATCGACAGCCTCCGTTTCCTTCACCGAGTCGCCCAAGAAATGCAACCTGTCTTTTTCGATTAACTTTGACTTTAACGACGTTAACAGCGAGAACTCGACCGATTCCGAGAATGCGGATCTACAAATTGACATATCCGAGGTGGACACTTACGAGCCGTCCAGCAAGCACAGGCGAGAGGCTGTCGAGGAGGCGTCGATGCTCAATGAAATGGAAGAGGAGATTGAGAGGCAACTCGATGCCAAAGCCGCCAAGACCAATTTGACTGCctctaatgtgaaaaatattttgaaacacGTCATCCCCTACGAGCATTTAATGACAATGGTACAAAAATGGCTTCAGGATACAGAGAACGACGTCAACATCGGTCCTaagcttacgagagccaaagCCAAGAAATTGGCCGCTGCCAAAGTTAACATACCATGGCCCATCACTACGGCGCAACAAACTTCCTCGGAGGTGCAGGCTTTGATTCAGGAGGAGTTACCGGAAGACTCGTCCGACGAAGAATACAATCCTGAACATGATAAACAGAGTGACGATGACAGAGAGGTGGAAAATACAGCGAGCAGTGACATTGAGTCACGGTTCTCAGCATCGATAAATAACAAGGATGCAGCTTCCTCCTCTGAACAAGTATTATCACATATACAGTATGATTCTGaaggaatttttaaaataccCGCTATTCCACACGTTGCGACGGATGAGGAGAGTATTGGCCAAAGGACACGCTCCAAGTTATCTTTAAGCGAAACTTCCTTGGAGGAGATAGAGCAAGCGTTCGTACCACCTGATATAACTGCCGATATGACTGAAGATTGGGACTGTGAGCTTGATGAAGACTGGGACAACTTTTTGAAAGAATTTACACAACCCTTGACGCAAGAACTAGCCGTGGATGATGATCCAGAAGCAGATCCTGAATATAACATCCTGGAGGATGAAACAGATTTACTGGACAAGGAAGAGCTTAGGACAGATAGAGCGGTAGAAGTTCCTCGTAAGGAGCAATATGACTTAATTGCCGAATTACTTGAATTGACTCTCATGTTCTCGACACAAGAACAAGAAGTCGAGAGTtcaagaaagaagaaagttcTAGACAATACAGCACCACCGAATGAAAGTGACGCTGTGaATTGCTCCATGGCACGTCTTTTGCCGGTACTTGCAGAATCTGAGCTGCCACAAGTGATGAATTCTGAACAACGTCTTCTATTAGCCACACAGTTTCAGCAACATGTACAATTAATGGCGCAACATTTCGTTATGACTTATATGCATCCAGACTATCATTCGTTGGCAAAAGAGTGTAAACAGAACTTGAATAGTTTAAGatatttGAGTAATGGGCCTAATTCTGCATTCAATGCCAAGAATTTGGAGACGGCTTTAAAATTGGTATCAATTTGGGAAAATAAGTTTGATGACGCCAAGTTTTGTGCAAACTTCAAGAAGAGTATAATGAGTGAAAGTGCTCAGACTCAAATATATTGTGCAAATAAGTGGCGGTACCTCGAACAATTTCCCCCCGaattagagaaattatttGTCGAAAGTAAGGCTCTCATGTACCCACAACTTCTACCATGGACGCCGTTCAGAAGCGGAGCTAAATATGCAAAACCCACATATTCCAAGTCGGAGGAAATCATTTTCAGTTTAATTGCACTGGGCATAGAACAGTTCTTACCATTTGTTATATGTAAATCAAAGAAGTTTCATACAAAGAAAATGCGATTATTTGATGTAACTCAACTTATCAGTCATCATCTGCTACCATGCAGAGATGCGAAAGGACTATTGAATCATATTATCAGACGACGCGCTTCCAAAGATGAAAATCCAATCAggcattattttaaaaaaggttaCGCTCCTagaataatacattatataatgCCTGAAAGTAAACTGAGGGCTCCAAAGGATCAGCCAATTGAACTTTTACCTCAAAGGTGGCAGATGTATCTTcaAAAAGAGCACAAAAGTAATTTGGCAGACagtaaatgtttatttgatttttacaataatctCTCGTGTGAAAAAGATGGGATTAACGCAATAATTAAGTCATACTGTAGTATCCctaataatcatattttacgAAATCCAGTTGTAAATATGTTGCCAAAAATATTACCTGCAAATCCGAAAATATCTAAAATTGATAATTCTACTAAACAAAGTTCTAAATTTGACAATAGTGGCGACAAAAAGGTACTTGATAATACTATACAAGATACGGAGGTGCACAAAAGGAAAACGCCAATACATAAGACGCGTGCAAGCTCTTGCGCCTTAAAAGCAAATACTTCAGATGTAAAGCCAATACAAACTGATCAATCGTCAGATAAAACTAATACAAAATTAAGTACTGTATTAACTAGAAGCTCCAAAATATCCCAGGAATCGCCACAGATATCGTCGGAATTACCACAAATACGAAAGACCACTCCACGATTAGCAAAAACGAGAAGTGCTCAGAATATGAAATTGATGGCCCAAGCTTTAGGTTCAAAGAACTCGTCTAACTGCAGCACTTTAAAATCTAAGGAAAAAGATACCGCAGATAAGAATATTGACAAACGCTCCTCCACGTCATCAAAAGTTGATAATGAAGAAGAAATAGCAGAATTAATGTTAGCGAGTAGCACAATAATAAAAGATCCTGTAAGTAGGAAAAAGGCTAAGCAAACTAGggaattagaaattattaaaagattattaaaatcgGAGAACCCATTGACTGAAGAAGAACGCGAAGCAAaatttGCAGCGTCGTATCTTCAAAAGCTGCACTTGATATTAGAATCGAATAATCCAGAAACATTTAAGGCTGTGATAAAGTTATATTTGGATTACAGTGAAAAGTTAGAAAATATTAACCATACTACTGTTGACCCGTCTATAATTGATGGATCTCAAGAATTTTCCAATAAACAGAGGTCACAGGATAGCGCGATTAAAAAAGATATACTAACGGTCCAATTGTACCAAGAGGTCTGTAAAAAATTACAGGATTACCCAGAAATATGTACagattttctattatttttaaaaccgCATCAAGCTGCAATGATTGGTAAATCTATGGAATATATGATGTTACAAAAAATGAATGACTTTGTCCATGTTGCACAAATATACTTTGCTAAGCAACCATCTCGCATAGCAAAGATGATGCAGGCAATTACACAACTTTCGTCTGATCCACACACGACTTTAAAAAACGTGTATTCCGTTATGAGCTCCGTTTTTAAAGGCCATCCACTCGTCATGGATATGTTTTTGCAAATTCTACCTACCGCAAAACCACCTGAAAgTTTACTTGGATCTCATATGTTTGAAAACATGACGTGTCCGTTAGGACCCtatgataaaaatacaatttatactGAAAACGCATCAGAGCTATACGAGAACATAGAAGTACCAACGGCAACGTGTCAGGAGGATCCATATGGCGGGGAGAATTGTAAATGTGACTGTCATAGTACCGATGAAGCAAatctgaaaaataattctGAACACTGTGTTTCCTGTGGTACACGGTTTCTTAACGGAAGAATTTATCTTCAAACACCTGAAGGATTACGACCTGCAAAGATTACGTTTCCCGGGGAGGATCGGGAGAAATTTGACAATATCGCGCgtatatcattaaaaattgctgATAAAGCCATTGCACCAATCTCATCGAAAAAACGACGAAAGTCGTCAAAGAATGATGCTAATCGCGAGGATATTTGTCAGAAACAATGCGCTACGAAACAATACTCGCCGTTGAAAGATAACGAAGATAATGAAAAGGCAATAGCAAAGtcgaagaaaaatgttaaatttactaCACTTAAAACAGATCAgaggaaaattttgaaaagaataGGCACTGTAGATCACGTAATCGCAGAGAAAAGAATGCGTATATCTCAATGCAAGAAtaagcgagagaaaaagattgaAGAAAGCGATGCTTCAATAGAACAAAACGAGCTGGATGTTATGAAACCAGAGAAACCGAGTGACTTTACGGAAACAGAAATTAACAGTTGTACACAGTTATCGATGCAAGAGAATTCCTTGAGTAGTACTGAAGTAATTACGAAAACGCAGATTTCTTCCAATGTGAGCAATAGTACTGCTTGTAGTTCAAgcaataaaaatgtagacGCAACAATTACAACAATACCACTAGAAAATAATATCCCGTCGAAatccgatttaattaaaaacaagcCTTGGACACGTCAGGAAGATATGATTTTGCTACAAAGTAtaaaaaaggaatattctgaaaatgcATTCCTACTGATTAGTGAAAGATTAGAAGATCGTACTGTCAATCAGGTGAAAGAGAGATGCCAAACTTTGCTTTCCTTACTGCAGAAAATGATGTAA
Protein Sequence
MDESANEPAENGADASTASVSFTESPKKCNLSFSINFDFNDVNSENSTDSENADLQIDISEVDTYEPSSKHRREAVEEASMLNEMEEEIERQLDAKAAKTNLTASNVKNILKHVIPYEHLMTMVQKWLQDTENDVNIGPKLTRAKAKKLAAAKVNIPWPITTAQQTSSEVQALIQEELPEDSSDEEYNPEHDKQSDDDREVENTASSDIESRFSASINNKDAASSSEQVLSHIQYDSEGIFKIPAIPHVATDEESIGQRTRSKLSLSETSLEEIEQAFVPPDITADMTEDWDCELDEDWDNFLKEFTQPLTQELAVDDDPEADPEYNILEDETDLLDKEELRTDRAVEVPRKEQYDLIAELLELTLMFSTQEQEVESSRKKKVLDNTAPPNESDAVNCSMARLLPVLAESELPQVMNSEQRLLLATQFQQHVQLMAQHFVMTYMHPDYHSLAKECKQNLNSLRYLSNGPNSAFNAKNLETALKLVSIWENKFDDAKFCANFKKSIMSESAQTQIYCANKWRYLEQFPPELEKLFVESKALMYPQLLPWTPFRSGAKYAKPTYSKSEEIIFSLIALGIEQFLPFVICKSKKFHTKKMRLFDVTQLISHHLLPCRDAKGLLNHIIRRRASKDENPIRHYFKKGYAPRIIHYIMPESKLRAPKDQPIELLPQRWQMYLQKEHKSNLADSKCLFDFYNNLSCEKDGINAIIKSYCSIPNNHILRNPVVNMLPKILPANPKISKIDNSTKQSSKFDNSGDKKVLDNTIQDTEVHKRKTPIHKTRASSCALKANTSDVKPIQTDQSSDKTNTKLSTVLTRSSKISQESPQISSELPQIRKTTPRLAKTRSAQNMKLMAQALGSKNSSNCSTLKSKEKDTADKNIDKRSSTSSKVDNEEEIAELMLASSTIIKDPVSRKKAKQTRELEIIKRLLKSENPLTEEEREAKFAASYLQKLHLILESNNPETFKAVIKLYLDYSEKLENINHTTVDPSIIDGSQEFSNKQRSQDSAIKKDILTVQLYQEVCKKLQDYPEICTDFLLFLKPHQAAMIGKSMEYMMLQKMNDFVHVAQIYFAKQPSRIAKMMQAITQLSSDPHTTLKNVYSVMSSVFKGHPLVMDMFLQILPTAKPPESLLGSHMFENMTCPLGPYDKNTIYTENASELYENIEVPTATCQEDPYGGENCKCDCHSTDEANLKNNSEHCVSCGTRFLNGRIYLQTPEGLRPAKITFPGEDREKFDNIARISLKIADKAIAPISSKKRRKSSKNDANREDICQKQCATKQYSPLKDNEDNEKAIAKSKKNVKFTTLKTDQRKILKRIGTVDHVIAEKRMRISQCKNKREKKIEESDASIEQNELDVMKPEKPSDFTETEINSCTQLSMQENSLSSTEVITKTQISSNVSNSTACSSSNKNVDATITTIPLENNIPSKSDLIKNKPWTRQEDMILLQSIKKEYSENAFLLISERLEDRTVNQVKERCQTLLSLLQKMM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00014660;
90% Identity
-
80% Identity
-