Basic Information

Gene Symbol
kn
Assembly
GCA_000949405.1
Location
NW:1244349-1324579[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-234 2.2e-230 765.5 0.3 39 562 20 547 15 558 0.83

Sequence Information

Coding Sequence
ATGAGGCAGATACTGAAGGAGGAACCTGTGCCACGTGCTTGGCCGCAGCCCGCGCTCGCCGACAACGGAACGGTTGGCGTGGGCCGGGCGCATTTCGAGAAACAACCACCGAGTAATCTGAGGAAGAgcaattttttccatttcgtaATCGCCCTTTACGATCGACACGGCCAACCGATCGAGATTGAGAGGACGTCGTTCATGGGCTTCGTCGAGAAGGATCAGGAGTCTGAGGGCCAAAAAACGAACAATGGTATTCAGTACAGTCTACATCTGCTCTATTCCAACGgtGTCAGACAGGTGCAGGATATCTACGTGAGGCTTATAGACTCCGCGACAAAACAAGCAATCATGTATGAGGGGCAAGACAAGAATCCGGAAATGTGCCGTGTTCTACTTACGCACGAAGTCATGTGCAGCCGATGCTGCGATAAGAAGAGCTGCGGCAACAGGAACGAAACGCCCAGTGATCCTGTCATCATCGACCGATTCTTCCTCAAGTTCTTTCTCAAGTGTAACCAAAACTGCCTCAAGAACGCCGGCAATCCACGTGACATGAGACGCTTTCAGGTGGTCATATCTACGCAAGTGGGAGTGGAAGGACCATTACTAGCGGTTTCGGACAATATGTTCGTCCACAACAACAGCAAGCACGGGCGCAGAGCGAAACGTTTGGACCCCAGTGATCCTGGCGAGTATAACAGTTTGTATCCACCAATACCTCTCCAAACACCATGCATAAAGGCGATATCGCCTAATGAGGGTTGGACGTCGGGTGGATCCACCGTCATAATCATCGGTGAAAATTTCTTCGACGGATTGCAAGTAGTTTTCGGATCGATGCTAGTTTGGAGCGAGTTTATCACACCACACGCAATCAAGGTGCAGGCACCAGCGCGGCAAATACCCGGCGTCGTCGACGTCACGTTACATTATAAAAGCAAACAATTCTGTAAAGGAGCGCCCGGTAGATTTGTCTACGTTTCGGTAAACGAACCCACGATCGACTACGGCTTCCAAAGGTTACAGAAACTCGTTCCGCGGCACCCCGGTGACCCTGAAAAGCTTCCAAAGGAGATAGTATTGAAGAGGGCGGCGGATCTAGCGGAAGCCATTTATAGTATGCCTAAGAGCGGAAACATGGGGATCGCGGGGGCACCCAGAAGTCCGGGTTCAGTGCACGCACCGGCACCTCCTACATCCAGTTCGGCAACGGCCTTTAATTCGTATACAGGACAACTTGCGGTGACGGTGCAGGAAAATGGTACCGCGGCAAAATGGACAGACGACGGTAGTTCCGTGACAACAGGAGCTGCTGCTGAcggaggaggcggcggcggcggtggtggcggcggcggtggcagcGGTGGTAGTGTCGGAGCCAACGTCGGCAGCGCCGACGCTTATAGACAAAGCAGCAGCGCAAGTCCACGTGGTGTCGTAACCGGCGGTGGTTATTGCGGTAGTTCAGCCAGCACACCACACAGTCACAGTACTAACGGAAGTTATTCCGTCGCCAATCCGTACACCGGCAGCCCGACTCTCTACACCTCGCCGCACGAACAATATGGCATATTCTATACATCCGGGGACGGGAGTGCGTTCGCCCCCGTAGTACGACCACCGACCACCTCAGTCCCACCGCACTGGCCCACACAGCACCACCTCGCCACAGCCGCCCAGTAA
Protein Sequence
MRQILKEEPVPRAWPQPALADNGTVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRHGQPIEIERTSFMGFVEKDQESEGQKTNNGIQYSLHLLYSNGVRQVQDIYVRLIDSATKQAIMYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVGVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSDPGEYNSLYPPIPLQTPCIKAISPNEGWTSGGSTVIIIGENFFDGLQVVFGSMLVWSEFITPHAIKVQAPARQIPGVVDVTLHYKSKQFCKGAPGRFVYVSVNEPTIDYGFQRLQKLVPRHPGDPEKLPKEIVLKRAADLAEAIYSMPKSGNMGIAGAPRSPGSVHAPAPPTSSSATAFNSYTGQLAVTVQENGTAAKWTDDGSSVTTGAAADGGGGGGGGGGGGGSGGSVGANVGSADAYRQSSSASPRGVVTGGGYCGSSASTPHSHSTNGSYSVANPYTGSPTLYTSPHEQYGIFYTSGDGSAFAPVVRPPTTSVPPHWPTQHHLATAAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00879410;
90% Identity
iTF_00142224;
80% Identity
-