Basic Information

Gene Symbol
Arid4b
Assembly
GCA_000949405.1
Location
NW:46918-62366[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4e-27 9e-24 83.3 0.1 1 89 308 395 308 395 0.95
2 2 6 1.3e+04 -3.9 0.0 47 62 1398 1413 1397 1426 0.74

Sequence Information

Coding Sequence
ATGCTGGGAGACGACCCACCGTCCCTCTCGGTGGGTACAGAGGTCAGCGCCAAGTATAAGGGTGCCTTCTGCGAGGCGAAAATCCGTAAGGTGGTGCGATCGGTGAAATGTCGCGTGACTTACAAGCCGCAAGGTTTAGGGACCGCCACGGTCGCCGACGATCAAATAAGAGGAACTTTAAGAGTAGGCGCCTCCGTCGAAGTTAAACATGTAGATCGGAAAGAACTTGTGGAAGCCACAATTACGAAGATTCAAGACTGCAGCCAGTACACTGTGGTCTTTGACGATGGGGATATCACGACGTTGAGAAGAACTGCGCTCTGTCTGAAAAGCGGGCGGCATTTCGCGGAAAGTGAAACGCTAGACCAACTGCCGTTGACTCATCCCGAACACTTTGGGAACCCCGTAATTGGGGGTAGAAGGGGCAGACGATCAAGGCAAGCGCAGGATGACAGCAGCGAGGATGAGGACAGTCCACCGCGAGGCGCTCGTGACACGGCTTCTAGCGGAGGTGCGAAGGAGGGAATGGAAACTGAACCAGAGATTGGTAGAGTGGTGTGTGTGGAGCTCGGtgacaagaagaagaaggacaaTTGGTTCCCAGGACTAGTGGTTGCACCGACTGCTCAAGATACAGTGAGAATACGAGTGAGAGACGATTACTTGGTGCGTTCGTTCAAAGATGCGAGATATTATACAGTACCCAAGAAGGAAGCTACAGAGTTCACAAAAGAATTAGTTAACAAAGTTGAAAATAATACTTTGAAGGTTGCAGTAGAGAAAGCTCTTctatttttagagaaaaatgaatTACCACCCCATTGGGACAAGGATTCCTTGTTCGGGCATTCCATTTCCAGTGGGAACAGCGATTACGATGGAGAACTCGACTCAGAtAGTTCGGACGACGAACCGCGCGAGGAAAAAGATCATTTTGTAGCTCAGTTGTATAAGTTTATGGATGATCGCGGGACACCTATAAATGTTTGTCCAATGATTGGATCTGAGGACATAGACTTGTACCGGCTTTTCCGAGCGGTGTACAAATTGGGTGGTTACAATCGTGTCACGAATCAGAATCAATGGAAGGCCGTGACACGGCGACTTGGTTTTACGATGCAGAATTCGGCGCCTTTGTACAATCTTGTGAAACAGGCTTATAAGAAGGTCTTGCACTCCTTTGAAGATTTTTATAGGAAACTAGGCTGCACCATGGTGAATCACCCGCGAGGCAGCACGCGTAAGCAACGTCCTGGAAGAAGTTTGATTCGCGACAAGGACAGAAATACTCCTATACCACCACCAGCACCGGCGCAAGTAAAAAGTGACAAGGATGAAGATGAGAAAAAAGTTGTGGAGGatgagaagaaagagaagaaggaagTTAAGAAGGAGCCAGTCAAGGAAGAAGAAGTTGTCAAGgtaaaaaagaaggaagaatcCGAGGGAAACGGTAGCGGCCAGGAAAGCGACGTAAATGTGGAAGCAGATATCGAATCGTCGTCCAATAATGAAAAATCGCCACAAAAACCGTCCACGCAAATTTCCACGTTATCTCCCACTTCGTGCGGTACTGCAGCTGCGTCGTCCAGTCGGGTCAAGTCGAAAGGTAAAGAAGACACCAAGAAGAAGGTGACTGAAAAGAAGAAGACGGAGACCAAAAAGCAAGAGAAGAAAGATGAGAAGATCAAGGAGGAAGAAGCCACCAAGACAAGATCCAAGGCGAAAGATGACACCGTGAGAAATAAAGGTGCCTCCGAAGGAAGGGAGACTCGGACGCCGTCTCGAGAGGCAGACAAGAAAACTGTGTCTAAGCAGCGGCGCTTAACGGACGAGGAATTGAAGAAACGAGGAAGAAAACGTAAGGAGTATGAAACGGAAAAGTCGCGTGCGGACGAGCAGCTTGCGGAGACCGCGCCTAGCTACAAAGGTCCCGTGGAGTGTGGCGACAAGTTGAAAGTGTATTACGGCCCGACGCACGAGTCCAAAGTTACTTACGAGGCGAAAGTCATTGAGATAGAGAAGGAAGGCCCAATGTACCTTGTACATTACACGGGTTGGAACACCAGGTACGACGAGTGGATCAAAGCGACTAGAATCGCTCAAAATATTACGCAAGCTCAGGGTAGAATAAAGCGCGTCAAAGCAACTCCTAGGCCCCAAACTCCTAGCACGAATTCGTCCAACAACGTCAACAAGCTGAAAGGTACTTGCAATTCGAGTGCCAATGCATCGCAGAGTCGTCGCCGGGCGCAAAGTGTCGCTCCTACTTCTAGCGCCGTTCAGTCAGCTTCGACATCTGCAAAGGAAGGcaagaaggaggagaaggaaaaggataCGGTACAGCCGACTAGGTCCACTACACCGCTATCTATCGCCAGTTCTAGTTCCAGAACCAAAAGTCCGGCCACACCCGCCAATAGGCCAACCAGAACAACGAGAAATGCCGAGTTATCCGGAATAGAGCATCGTAGGCGTACCAGAAGAACCTCGGGACATACAGACATATCAGTCGCATCGGAAAGCGAAGATAGCGAGGGTTACGAGTCCGATACCACCGAGTCCGAGCAAACCAAGACCAGGTTGAGAGGTATGGAAGAGAGGAAACGGAAGGAGGCGCGAGGCAGAGCAGAAGAGAGGATTAGAACGGACGATGCAATGGTGAGCGACGCTGACGATGACAAGGACAACTTGGATGAGCCACGCAAGGGTAGGCGTTTAAGAAGAACTCCCGGTAAATCTCAAGGTATCAAGTCCGAGCCTGATAGTGATCAAGAGGAGCAGCCGAAGGGTCGAGACTTCGATCTCAATCAGATACGATCTGAATTGAAAGGTTTCGACAAAGCTGTCAAGATGGAAATAGTCAGAATGGAACCTGATGACGAAGTCAAGTTGGACGAGAAGGAGAGCGTGACTACCGCGTCCACGGCGTCGCCCAAATTGGAGAAAGCTATCGAATCCCCGAAAGTGGAGGTTGTCGAGACGAAGGTGGAAAGTACAGAAGATATATATGAATTTAAAGAACCGGAGCCGTTCGAGTTTGAGGtacgaaataaaagagataccACCTGTGACAAAGATAAACTGAAGAAGAGAATGTTTGAGGACGAAGCCAAGAGTCCGAAGAAGAAGCCAAAGACACCGGTTACGAGCTCGGTGACGAAGGAAACGAAATCGGAACCGGCGGAAAGCGACTCTCGGAAAAAACCGAGGAAATTGTTCAGCAAGAGATCAGACGACGCGCACGAGACGGTGACGACTACGTCGGGCAAACCGCCGCAGGTCGTGTCGTGCGAAGACGTTTTCAATAAGCTATGCGAGTCGTCCACATCGTCGTTCAGTCAATTGAAGTCAACCGTTGCGGAAGAGTCGAGTAACAAGGCGGCTGGTTTAAATCTCTTGTTCAACGACTTGCCAGCGGACGATGAAGTTACGCGCGACGACTCTGAGGACCGTCTGATCATTTCGGAAACCGAGGTATCGGAGGCGGAGCAAGAAAATATGTTTGCATATCAGCAAGAGATTCAGTTCCAAGGCGGCAAGTCGCCGAACGCGGTGGAATTAAATAAGAGCGAGACGAACGCCGCGGCTGAGGCGAAGGAAGAAATGTCGATGATCAGCACGAGCAGTAATAAATCTGCTAACATTCCGGATCAGAAACCGAACCAGGTCAAGTCGTTGCCAGGTCAAATCGCTGCTAGTCAGTCGCAGGCAGAGTCGAAGACGTTGGATTCAAAGTTGCTCGACATCGTCCCGGTTCCGTCGCCTATCGTGACGCCGCCTGCTCCTATAAGCGCGCGACTGCCGGCGACATCCACGATCGAAGAGAAATTGTCAGCTGCCGCGATGGCATTCCGAAGCAAAGCTAAAGACGTTAAGAAGACTTCGGACGAGGAGGCGCTTGATGTCGTGCGCGTAATCAAGGTACTGAAGGAAACGTCCAAGAAATTAGACACTCCTAATCTCCTTCACAGAGGAAAGGATACGGATTGCGTTATTCCCGCGGCCGAAGTGGATAAGAAATGCGAGCAGGAAAAGAACGATGAGAATCTGCGCAGAGAAATCatgcgcgcgatcgcgaagcGGAAGGAAGAAGAGATATTGAAGTTGAAGAAGGAAGCGGAAGAGATATCGAAGCCGAAGAAGTTCTCAGAGGCGAAGGCACAGGTTGCCGAGCACAAGATCAAATTGCAGGAGGTCACGAGAGACGAGGGTTGGAGAAACGCCGGGTACGAGATGCCCGACAAGAAGCCCGAGGAGGAATACAAAACGACGGATCAGAAGGAGAAGGACAGGATTGATAGTCGCAAGAAACAAATCAATCAGGATATTATAGATTCCACGGATAGCAGTGATTCAGAACAGAGGCTCGTGATAGACAACGAGGAGCCGCAGGACGTTAAAGCGCCGGTGTCCACCTTCGACGTGAAGCTACAAGCGGAATTGGATTGCACGGAGAGCACGCAGGAGAGATACGCGAGGTCGCAGGCGTTGAAGACTTCGCAAAGTGTTCATCAACAGGAACAGGAGTCTTGTTGCGTGGAGTTCAAGACTGACGCGATGCCCGTTCTAAAGACGGACGAGGAGGGCGAGACAATGAATTCGCTGCTGTGCGAAGAGGAGATACCTGGCTCGCCGGCCCCGCTACCCGAGGGCATCGAGCAAGCCAGCGTCGGTTCTTCGCGCAGTCCACCGAAGAACGAAGTCACGGAAAGTAGCCTGGTGCTGATGGAGATGCCCTTTGCGAGTGCACCGACCTCGAGTCAAAATGCAACGAGCAACAGTACCGTCGCTACCCTCAGCATGGCTTTGCCGAAGACCATGGAAACGTCAATGCCGGGTTCACTACCAGCGCAACAGAACACTGCTTCAAACATGCGGCagtcgcagcagcagcagcagcagcagcaacaacaacaacaacaacaacaacagcagcagcataTGTTGGCTCTGATACCACCACGACGAGGGAGCAACGAAGCCGCGCCGGTGATGGACAATACGCCGCCGACGACGCCTGACTCGAGCATCTCCAACATTTCGGGCTCGCCTAGGGACGAGAGAACCGGTGGTTCGTCGCCGGCCTCCGAGGACAACGTCAAGCTCAATCGCGACAACCCCGAGGCGGACCATGACGACGCTGGTAAATGCTTGGGCCTCAGCGAGGACGACATTTTACCCAACTCCGAAGCCAACTCCGCAGATAGAATTCTTAAGCCGCCTGCCAAACGTACGATCGAAGACATGCAGTCACCTAAGAAACGCAAGAGGAATAGAAAACACTCGGAGTGCGGAAGCGGCAGcatcggcgtcggcgtcggcgtcccCGATGGCATCGGCGTTGGCGTAAGTGTCGGCGTTAATGCTGGCGTGGACGTTGGGATTGGTGTCGACGTCGGCGTCGGtggcagcggcagcagcaacagcaacagcaatAGTGGttgcggcggcggtggcgatgGTGACGGCGGTGGCAGTGGCGGCGGCAGAGGTGGCGGTGGCAATGACAGTGGCAATGTTAGTGGCTACGGCAACGGCAATAATGGTAGCGGCGGCGGTACCATTCCGAAGAAACCTGGCAGACAAAACGGTAGGCACGGCAGATACGGGCCTGGAAGCGACAGCGACGACACTAGCGAGGGATCCAATCTCTGCGGGGTCAACAGCACGCCGACGAGTCACATCACTACCATCACGAACGTGCCCGATCTCAGCACCTACTCGTCGAGATCGCCGAGACCGACAAAGTACAATTTTTACGTCGAATTGGATCCGGAATTGGATGGTAGTCAAAGGATAGCTGTACTACAGCAGAAATTAACTGAATTACGGAAGACGTACAATGCCGTAAAGGTTGAGCTTGCTGCTATAGAAAGACGTCGGAAAAAACTAAGAAGGCGAGAACGAGAAGCAATGAAAGCAGCTAAGGCAGAAATGCAGCAGGCTTGTTCGTGA
Protein Sequence
MLGDDPPSLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKPQGLGTATVADDQIRGTLRVGASVEVKHVDRKELVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDDSSEDEDSPPRGARDTASSGGAKEGMETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENNTLKVAVEKALLFLEKNELPPHWDKDSLFGHSISSGNSDYDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINVCPMIGSEDIDLYRLFRAVYKLGGYNRVTNQNQWKAVTRRLGFTMQNSAPLYNLVKQAYKKVLHSFEDFYRKLGCTMVNHPRGSTRKQRPGRSLIRDKDRNTPIPPPAPAQVKSDKDEDEKKVVEDEKKEKKEVKKEPVKEEEVVKVKKKEESEGNGSGQESDVNVEADIESSSNNEKSPQKPSTQISTLSPTSCGTAAASSSRVKSKGKEDTKKKVTEKKKTETKKQEKKDEKIKEEEATKTRSKAKDDTVRNKGASEGRETRTPSREADKKTVSKQRRLTDEELKKRGRKRKEYETEKSRADEQLAETAPSYKGPVECGDKLKVYYGPTHESKVTYEAKVIEIEKEGPMYLVHYTGWNTRYDEWIKATRIAQNITQAQGRIKRVKATPRPQTPSTNSSNNVNKLKGTCNSSANASQSRRRAQSVAPTSSAVQSASTSAKEGKKEEKEKDTVQPTRSTTPLSIASSSSRTKSPATPANRPTRTTRNAELSGIEHRRRTRRTSGHTDISVASESEDSEGYESDTTESEQTKTRLRGMEERKRKEARGRAEERIRTDDAMVSDADDDKDNLDEPRKGRRLRRTPGKSQGIKSEPDSDQEEQPKGRDFDLNQIRSELKGFDKAVKMEIVRMEPDDEVKLDEKESVTTASTASPKLEKAIESPKVEVVETKVESTEDIYEFKEPEPFEFEVRNKRDTTCDKDKLKKRMFEDEAKSPKKKPKTPVTSSVTKETKSEPAESDSRKKPRKLFSKRSDDAHETVTTTSGKPPQVVSCEDVFNKLCESSTSSFSQLKSTVAEESSNKAAGLNLLFNDLPADDEVTRDDSEDRLIISETEVSEAEQENMFAYQQEIQFQGGKSPNAVELNKSETNAAAEAKEEMSMISTSSNKSANIPDQKPNQVKSLPGQIAASQSQAESKTLDSKLLDIVPVPSPIVTPPAPISARLPATSTIEEKLSAAAMAFRSKAKDVKKTSDEEALDVVRVIKVLKETSKKLDTPNLLHRGKDTDCVIPAAEVDKKCEQEKNDENLRREIMRAIAKRKEEEILKLKKEAEEISKPKKFSEAKAQVAEHKIKLQEVTRDEGWRNAGYEMPDKKPEEEYKTTDQKEKDRIDSRKKQINQDIIDSTDSSDSEQRLVIDNEEPQDVKAPVSTFDVKLQAELDCTESTQERYARSQALKTSQSVHQQEQESCCVEFKTDAMPVLKTDEEGETMNSLLCEEEIPGSPAPLPEGIEQASVGSSRSPPKNEVTESSLVLMEMPFASAPTSSQNATSNSTVATLSMALPKTMETSMPGSLPAQQNTASNMRQSQQQQQQQQQQQQQQQQQQHMLALIPPRRGSNEAAPVMDNTPPTTPDSSISNISGSPRDERTGGSSPASEDNVKLNRDNPEADHDDAGKCLGLSEDDILPNSEANSADRILKPPAKRTIEDMQSPKKRKRNRKHSECGSGSIGVGVGVPDGIGVGVSVGVNAGVDVGIGVDVGVGGSGSSNSNSNSGCGGGGDGDGGGSGGGRGGGGNDSGNVSGYGNGNNGSGGGTIPKKPGRQNGRHGRYGPGSDSDDTSEGSNLCGVNSTPTSHITTITNVPDLSTYSSRSPRPTKYNFYVELDPELDGSQRIAVLQQKLTELRKTYNAVKVELAAIERRRKKLRRREREAMKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00128745;
90% Identity
-
80% Identity
-