Basic Information

Gene Symbol
grh
Assembly
GCA_000949405.1
Location
NW:661737-680763[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8e-64 5.4e-60 202.0 0.3 22 221 328 529 315 531 0.90

Sequence Information

Coding Sequence
ATGAGCCAGAAGCTGCTGGTGCAGGAAGCGCCTGGCTCCGGTTCCACCTCGACGAATCGTATGGAAGGCGGCGAAGGCGCCGGAGGGGGGGAGCTGCACCACTTCCTCCAGTACAACCAGCAGTCCCACAGTCCCGGCCAGAGCCTGCAGGGACTCCCGCTTTCGATCAGCCCGCAGCCCCTGCGACACGACGGTGCCTCGAGCGCCGGCATCGTCGGCGTCAAGAGGGAACCGGAGGATCTCAGTTCGTCGCGTGGGGGTCAGCAGTCCGGCAAACGGCACAAACAGACACAGCCGGAGAGTCCCACACCGCCGGGAATGTACCATCATCATCAGCATCAGTTGCAGGTACAGCAGTACGGCAGCCCTTATGACCCCTACACGTCGTGCAGTCCGAGGTTGCAGTCAACCGCGTACACGTCCACGTCAGCGACCGGGACCGGGAATGCAACAGCGAATCCAGGAAGCGGCCTCCATCAGGAGCCGACGACGGTCTACGTCACCGGCGAAACGCTACCGCCGCTCGCCTCGTCGAGCTCCGCTTCCTCGCTGTCCACCACAACTGCTTCGTACACGAGGTACGAGGTTGTGCCGAGCTCATACGCTACGACACACGCGATACGCTCGTCGTCGAGTAGCAGCAAAGTCCTGACTGTTGATCTTCCCAGTCCCGACTCGGGTATAGGCGCGGACGCGGTGACACCCAGGCAAGACCATCATCCGACCACGGCTCTTCATCAGTCCTCGTTCGACTACACAGAATTATGCCCCGGCGGGACCACGGCCGGGACGGCGGTGGTCCTTGAGACTGGCACGGTGTTGCACCAACCCCTGCAACTACAACTGCAACAGGGCCACTCGCAAGGGCAGGTGCAGCGCGGCAATCTGGTGTCGGGTGCGACAAATTCTAATCCGAATCCGCAGAGGTCCCGACCTTGGCATGATTTCGGTAGGCAGAACGACGCTGACAAAATCCAGATACAGAAAGTTTATTCGAATTACGGATTTAAGTACCACCTGGAGTCGCCGATCAGCACGTCGCAGCGCCGCGAGGACGACAGAATAACGTACATCAACAAGGGTCAGTTCTATGGAATCACGTTGGAATACGTGCCCGATCCGGACAAGCCGCTCATCAAGTCAGGGCAGACAGTCAAGAGCGTGGTGATGTTGATGTTCCGGGAGGAGAAAAGCCCAGAGGATGAGATCAAGTCGTGGCAGTTTTGGCATGGTAGACAACATTCTGTCAAGCAACGGATTCTCGATGCCGACACAAAGAACAGCGTCGGCCTGGTGGGCTGCATAGAGGAAATCGCGCACAATGCGATTGCCGTTTACTGGAACCCAATCGAATCGTCGGCGAAGATAAACGTTGCGGTGCAGTGTCTCAGTACCGATTTCTCGAGTCAGAAAGGCGTGAAGGGCTTGCCGCTGCATATCCAGATCGACACGTACGAGGAGTACGTGTCCCAaacgcacacgtacacgccgCCTTCCCATCGCGGCTACTGTCAAATTAAGGTCTTCTGCGATAAGGGAGCGGAGAGGAAGACCCGGGACGAGGAGAGACGCGCGGCTAAGAGGAAGATGTCGACGACCGGCAGAAAAAAGCTCGATGAGCTTTATCACCCCGTCACGGAGCGCAGCGAGTTTTACTCCATGGTCGACGTACACAAGCCGCCTGTACTGTTCTCTCCGCCGGCCGAGCACGCCATCGATAAGGTAATCCACGTCGTTTCTTTTTCGTGCGTTACTCAAATAAGAAACGGCGTTGTCCGCAATGACGCGCTGCGTTCTCCAAGAGATAcggtattaaatttaataattgcacgaaagacattattttattacgaaattaagtataatataaacTTTTCGACGATGGAGTTGTCGGGCTTCtacggtggtggcggcggcggcggcgggggcgggggtgaCACCGACACCTCATCTCTCAGTAACGGTGAAGGTGGAGGATTGAAGGCGGCAGGGGGCAGCAGCCCCTATCCGGCGGCATGCGGGCGGCCGAGTCTGCCAGCCCTCAAGTTCCACAACCACTTTCCGCCCGACAATCTCAGTAACCTGCACGACAAGAAGGACTCGTTGCTGATGCAGGTGCAGGAGCTGCAGGGCTCGGTGCTGCAGGGGGTGCAACAGACTGGTCTGGCGGGCGCGGTGGTTTCCAGCGTTGGGAATCGACTGCACCTGCAGCAGCAAGCCTCGCATCTGCGTCCGACGGACGCCGAGGAGCGCGTCATGCTCTACGTGCGTCAGGAGTCGGAGGATGTCTACACGCCATTGCACGTGACGCCGCCGACGGTCCAGGGACTGCTGAACGCTaTTGAGTCAAAGTACAAAATTGCATCCTCGAGTATTAATAATCTCTATCGCAAAAACACAAAGGGAATTACAGCGAAAATTGACGACGATATGATGCGATATTACGTCGACGAGGACTTTTTCCTGTTGGAAGTGAGTCACTCGCGGATCAATCAGGACAGCGAGCGCAACCTGAACAATCCAGGTTCGCCGGGCGATCCTAGTGATCCGGGTGATTCTCCCGCCGGATACGACGTCACCCTCATCGAACTACCCACGTCGTCATCGCACTCACCTCTTGCCAATTCCACGCATGCACACGGGCACGTTCACGACAACAGTAACACCTGA
Protein Sequence
MSQKLLVQEAPGSGSTSTNRMEGGEGAGGGELHHFLQYNQQSHSPGQSLQGLPLSISPQPLRHDGASSAGIVGVKREPEDLSSSRGGQQSGKRHKQTQPESPTPPGMYHHHQHQLQVQQYGSPYDPYTSCSPRLQSTAYTSTSATGTGNATANPGSGLHQEPTTVYVTGETLPPLASSSSASSLSTTTASYTRYEVVPSSYATTHAIRSSSSSSKVLTVDLPSPDSGIGADAVTPRQDHHPTTALHQSSFDYTELCPGGTTAGTAVVLETGTVLHQPLQLQLQQGHSQGQVQRGNLVSGATNSNPNPQRSRPWHDFGRQNDADKIQIQKVYSNYGFKYHLESPISTSQRREDDRITYINKGQFYGITLEYVPDPDKPLIKSGQTVKSVVMLMFREEKSPEDEIKSWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEIAHNAIAVYWNPIESSAKINVAVQCLSTDFSSQKGVKGLPLHIQIDTYEEYVSQTHTYTPPSHRGYCQIKVFCDKGAERKTRDEERRAAKRKMSTTGRKKLDELYHPVTERSEFYSMVDVHKPPVLFSPPAEHAIDKVIHVVSFSCVTQIRNGVVRNDALRSPRDTVLNLIIARKTLFYYEIKYNINFSTMELSGFYGGGGGGGGGGGDTDTSSLSNGEGGGLKAAGGSSPYPAACGRPSLPALKFHNHFPPDNLSNLHDKKDSLLMQVQELQGSVLQGVQQTGLAGAVVSSVGNRLHLQQQASHLRPTDAEERVMLYVRQESEDVYTPLHVTPPTVQGLLNAIESKYKIASSSINNLYRKNTKGITAKIDDDMMRYYVDEDFFLLEVSHSRINQDSERNLNNPGSPGDPSDPGDSPAGYDVTLIELPTSSSHSPLANSTHAHGHVHDNSNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01406994;
90% Identity
-
80% Identity
-