Basic Information

Insect: Villa cingulata
Gene Symbol: -
Assembly: GCA_951394055.1
Location: OX596025.1:10412073-10413989[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.79 97 4.9 0.1 1 23 50 73 50 73 0.94

2 13 2.6e-05 0.0033 19.0 1.0 3 23 196 217 195 217 0.97

3 13 0.00029 0.035 15.7 1.6 1 19 268 286 268 289 0.94

4 13 2.7e-05 0.0034 19.0 0.9 2 23 297 318 296 318 0.96

5 13 0.0074 0.92 11.3 6.9 1 23 324 346 324 346 0.99

6 13 0.76 95 5.0 2.0 1 23 351 373 351 373 0.90

7 13 0.0026 0.32 12.7 0.4 1 23 379 401 379 401 0.92

8 13 7.5e-05 0.0093 17.6 0.6 1 23 407 429 407 429 0.99

9 13 0.011 1.3 10.8 0.2 1 23 434 456 434 456 0.97

10 13 2.7e-05 0.0033 19.0 2.9 1 23 462 484 462 484 0.98

11 13 1.1e-05 0.0013 20.2 4.5 1 23 490 512 490 512 0.97

12 13 2.5e-05 0.0031 19.1 0.4 1 23 518 540 518 540 0.98

13 13 0.0027 0.34 12.7 1.8 1 23 546 568 546 568 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.79	97	4.9	0.1	1	23	50	73	50	73	0.94
2	13	2.6e-05	0.0033	19.0	1.0	3	23	196	217	195	217	0.97
3	13	0.00029	0.035	15.7	1.6	1	19	268	286	268	289	0.94
4	13	2.7e-05	0.0034	19.0	0.9	2	23	297	318	296	318	0.96
5	13	0.0074	0.92	11.3	6.9	1	23	324	346	324	346	0.99
6	13	0.76	95	5.0	2.0	1	23	351	373	351	373	0.90
7	13	0.0026	0.32	12.7	0.4	1	23	379	401	379	401	0.92
8	13	7.5e-05	0.0093	17.6	0.6	1	23	407	429	407	429	0.99
9	13	0.011	1.3	10.8	0.2	1	23	434	456	434	456	0.97
10	13	2.7e-05	0.0033	19.0	2.9	1	23	462	484	462	484	0.98
11	13	1.1e-05	0.0013	20.2	4.5	1	23	490	512	490	512	0.97
12	13	2.5e-05	0.0031	19.1	0.4	1	23	518	540	518	540	0.98
13	13	0.0027	0.34	12.7	1.8	1	23	546	568	546	568	0.95

Sequence Information

Coding Sequence: ATGGACTTCGTATGTTTAAAAAAAGATTTCGTTGAGcatttaaaatctaaaaatgatatttctaCATTGGACAATATACTAGataaaaattcaaGAAGTTCGCATAAATGTGGCGAGATTTTTATATCTGAAGAGGAAGTATTCAACtttttgtgtacattatgtGAAGCACCATTTGAAGAAgtagataaattttttgttcatgttaaaagtattcataaaaatacaaatgatcATAAAACCTTAGAACCTCTAAAACAAAATGTGAATGAATATCAATGTAAATCTAGTATTGAACACAATTCTATTGacaaattgaattcaaattctCCAGAAAATGTATCAAATCCGTATGATGAAGACATTTTGAAAGAAGATTTACTGTCAGAGAACAGTGCAGAAGTAAACGAAGAAAGTAGTAGTAGTGAAAGTGTAAGTGATACCCATATcgatgaaaatgaagatgaaacaTGGCATAAACCTAAAAAAATTGCACAAAGAAAAAAGACGAAAACAAAATTCCgattaaataatttgaatgaatataaaCAAGAGAATTCAGCTGGAAAAAATACAGATCTTTTATGTGATATTTGCAGTAAAGGTTTTAAAACGCTTTACACTTTAAAAcgacatttgaaaaatattcacaGTATTCGAGCTTCAAAGAATAATAATCCAACAGAAGAAACAGAGCCACAGTCGCAACCAGTCTCAGTTTTGATCCAACCGAAGTCCACAgattcaaaaaatattgaagaagaTAACAAAACTAATTCTTTGAATTCTGAAAAAACCTCACATAAGTGTAAATATTGTGACCgtcaatttaaagaaaagtcAAAATTAGAAGAACATGAAACAATTTATTGTGAAGAAAAACCATCTGAATGTCAAACTTGTGGTAAGCAATTTACTACCAAAGCACGTTTATGGAGACATGAAAAAATTCATACCGATATCAGAGAATATAAATGCAATGTTTGTCAATCTGAATTCAAGTATAAAAAAGGTCTGCATACTCATATGCATAGACACGGTGAGAAAAAGTTTTCCTGTAATTATTGTGCAAAGAAATTTTTCATAGAATTTGAAAAGAAGGAACATGAAAGACTTCATACTGGTGAAAGACTATTTGTATGTATTACTTGTGGTAAGCAATTTTCTACAAAATCACGGTTAGGGAAACATGAAGCAATTCATACCGATATCAGAGAATATAAATGCGATATTTGTCAGTCTGCATTCAAGAGTAAACCAGGTCTGTATTCTCATATGCTTAGACACGGTGAGAAAAAGTATTCATGCGATTATTGTCCAATGAGATTTGTTCTCGAATCTGGAAAGAGGGAACATGAAAGAGTTCATACTGGTGAGAGACCGTTTCAATGTAATTATTGTGGAAAATGTTTTCAAACTGGTGGTAGTTTGAGTACACATGTGAAATCACATACAGGACGAAGACCACATAAATGTCAATATTGTGATAAATGTTTTTACACAAAAGCTCTTCTCAATAATCATATCGTAATACATACAGGTGAAAGACCATTTGTGTGTTCAATATGTAAAGCAACATTTCCGCGACAAAAAGCACTAAGATCGCACGAAAAAATTCATTCTGATTTGAAAGCATATGTGTGTAAAATTTGTGGAGAAGCTTTCAAGCAATATGCTGGACTATACTGTCATAAAAAAAGTCACGGACAAccttttaaaaaacaaattcaattgcaatgttaa
Protein Sequence: MDFVCLKKDFVEHLKSKNDISTLDNILDKNSRSSHKCGEIFISEEEVFNFLCTLCEAPFEEVDKFFVHVKSIHKNTNDHKTLEPLKQNVNEYQCKSSIEHNSIDKLNSNSPENVSNPYDEDILKEDLLSENSAEVNEESSSSESVSDTHIDENEDETWHKPKKIAQRKKTKTKFRLNNLNEYKQENSAGKNTDLLCDICSKGFKTLYTLKRHLKNIHSIRASKNNNPTEETEPQSQPVSVLIQPKSTDSKNIEEDNKTNSLNSEKTSHKCKYCDRQFKEKSKLEEHETIYCEEKPSECQTCGKQFTTKARLWRHEKIHTDIREYKCNVCQSEFKYKKGLHTHMHRHGEKKFSCNYCAKKFFIEFEKKEHERLHTGERLFVCITCGKQFSTKSRLGKHEAIHTDIREYKCDICQSAFKSKPGLYSHMLRHGEKKYSCDYCPMRFVLESGKREHERVHTGERPFQCNYCGKCFQTGGSLSTHVKSHTGRRPHKCQYCDKCFYTKALLNNHIVIHTGERPFVCSICKATFPRQKALRSHEKIHSDLKAYVCKICGEAFKQYAGLYCHKKSHGQPFKKQIQLQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01519594;
90% Identity: iTF_01519609; iTF_01519594;
80% Identity: -