Basic Information

Insect: Villa cingulata
Gene Symbol: -
Assembly: GCA_951394055.1
Location: OX596022.1:2766460-2771680[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.14 17 7.3 0.3 2 21 34 53 34 54 0.93

2 18 0.0052 0.64 11.8 2.2 1 23 75 97 75 97 0.95

3 18 0.82 1e+02 4.9 2.3 1 23 103 127 103 127 0.94

4 18 0.046 5.7 8.8 0.7 1 23 130 153 130 153 0.97

5 18 0.0082 1 11.2 0.2 3 21 163 181 162 182 0.92

6 18 0.00026 0.032 15.9 1.1 1 23 190 212 190 212 0.98

7 18 0.015 1.8 10.4 2.6 1 23 218 240 218 240 0.97

8 18 9.8e-05 0.012 17.2 0.4 1 23 246 268 246 268 0.96

9 18 0.8 99 4.9 5.1 1 21 274 294 274 295 0.93

10 18 0.0065 0.8 11.5 3.1 1 23 673 696 673 696 0.96

11 18 0.00027 0.034 15.8 1.1 2 23 714 735 713 735 0.96

12 18 9.2 1.1e+03 1.6 4.8 1 23 743 766 743 766 0.94

13 18 0.00027 0.033 15.8 0.5 2 23 771 793 770 793 0.96

14 18 0.00016 0.019 16.6 0.8 1 21 836 856 836 857 0.93

15 18 7.5e-06 0.00093 20.7 2.3 1 23 865 887 865 887 0.99

16 18 2.3e-06 0.00028 22.4 1.6 1 23 893 915 893 915 0.98

17 18 2e-06 0.00025 22.5 1.3 1 23 921 943 921 943 0.99

18 18 0.0029 0.36 12.6 3.6 1 23 949 971 949 971 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.14	17	7.3	0.3	2	21	34	53	34	54	0.93
2	18	0.0052	0.64	11.8	2.2	1	23	75	97	75	97	0.95
3	18	0.82	1e+02	4.9	2.3	1	23	103	127	103	127	0.94
4	18	0.046	5.7	8.8	0.7	1	23	130	153	130	153	0.97
5	18	0.0082	1	11.2	0.2	3	21	163	181	162	182	0.92
6	18	0.00026	0.032	15.9	1.1	1	23	190	212	190	212	0.98
7	18	0.015	1.8	10.4	2.6	1	23	218	240	218	240	0.97
8	18	9.8e-05	0.012	17.2	0.4	1	23	246	268	246	268	0.96
9	18	0.8	99	4.9	5.1	1	21	274	294	274	295	0.93
10	18	0.0065	0.8	11.5	3.1	1	23	673	696	673	696	0.96
11	18	0.00027	0.034	15.8	1.1	2	23	714	735	713	735	0.96
12	18	9.2	1.1e+03	1.6	4.8	1	23	743	766	743	766	0.94
13	18	0.00027	0.033	15.8	0.5	2	23	771	793	770	793	0.96
14	18	0.00016	0.019	16.6	0.8	1	21	836	856	836	857	0.93
15	18	7.5e-06	0.00093	20.7	2.3	1	23	865	887	865	887	0.99
16	18	2.3e-06	0.00028	22.4	1.6	1	23	893	915	893	915	0.98
17	18	2e-06	0.00025	22.5	1.3	1	23	921	943	921	943	0.99
18	18	0.0029	0.36	12.6	3.6	1	23	949	971	949	971	0.98

Sequence Information

Coding Sequence: atggaaaaaattgaaaagcaaGTATCTTGGTCTGATTCTGATGAATCTGATGAAACTGATGAAGAATCACcaagaaaatttgttaaaaatgatgaaagaagaTGTAAATATTGTGttAAACTTTTTCGTAATGAATTGAATGTTGAACGACAtgagaaaatatgtaaaattggtGCAAAAAATACTGCAAAACTGGTAAAAGCAAAAGATGGTAATATACGATTTTTATGTGATGTATGTTATcggacatttaaatttttaacgggcctaacaaaacataaattaagACATGAACCGCCCGGCGgatatgaatgtaaattttgCGATAATACACGATATTGTACAGATGCCGAATTACAAAAACATAAAGAAATTATGCACatggtatataaatgtaagatTTGCAAAGAAAAAATGGATAACAGAGATAAATATGTCGAACATATATTACGTGTACATGATGGACGTCAACTTTTATATGCGATTTGCGAAGATTGTGGCCAACAATTTCGTACTCGTTCAGTATTATCGTATCATAAGCAATCAATGTGCGGCACAATAAAACCGTTCACATGTGATCGTTGCggttcaaaatttcaaaatcaatggtcattaaaaaatcatttacaaattcataaaggtgaaaaaaaattttgctgtTCATATTGTGGTAACAGTTTCTTGAAAAAAGGACAACTTGTTGTACACGAAAGAAAGCATACTAAAGAGAAACCGTTTGTATGCAATatCTGCTCAAAAGCATTTTCATATCGTGAAAGTTTGGTAACACATTCATCAGTTCACACCGGTATTAAACCGTATTTATGTGAGGCATGCGGTGCATGCTTTTCATGTTTCAGTAATTTACAGAAGCATCGTCGTCATCGTCCAAATACATGTGGCCAACCACaattcaatacaaatacaaaaattgctCCACGAGCAAGTTTTAAAtcCGGTAAACTTACAAGACAAATTAAAGTCGGAAAAGGAAATTTAGTTTTAGAAGGTACAAAGAGGCCAACTGAAAATAATGCAAATGTTAAACAGGAGGTAAAATGCAAAAGTAAAAAATCTAAAACAGATAAGACGCCACTAAAAACTGATGAAAATCATGACAATAAAAATGATCCTCCAAGTCCAGCTAAAAATGTAAAAGACGAAAATATTCGAATAACTGATAATCTAGAGAAGGTAAATCAATTTAATGCTGTAGCAATTCAGTCAACTATTTATTCTGAAATTGTCGATGACACTGAAGCTGAAGAcaagaaaactataaaattggaaaatccAATTAATGATGCAGTAGTAGCGACAACAAATAGTAACGATAACATTGTTCATGTATTTGAAGTGAAAATTTCAGAATTATCTgagaatgatgaaaatgaacaaTATGAGCATaattatgaaattcaaatttataatgaatCATCAAATAAttctgatgataatgataatgattacGATGATGATAAAcgtaatactgaaaatttattgaatcaAATTGAAATCATTAATACAAGCAGTAACCATTTGGACGatgaaaatttcgaagcaaaagaaaaagaaaaaaaggaaatattaatcgaatttgatgaaaataatGAAGACGATAATGCTTCACTTACAAAATGTGtgaaagaaaaatctgtagaagAGGTGAAAAATGTggcaataaaatttgataagaCTGACACTCATAATAGCtgtgataacgatgatgatgatgatgatgatgatgatgatgatattccTTTATCTAgaattaagtataaaatttcacttataaaacaacaacaacaacaacaaaatatcgATAAGAAAAACGATAATTCCACTATCGATGatcagaaaataattaaaaaatgtaaaattgaaattactgCAAATGATGATAACCATGAAAAATTTcctccaccaccaccaccatctGAATCCAATAATTcagattcaaattcaaatttaaattcaaaaaaatcaaatcatacAATCAAAGATACAAATAAATTGTTCGAATGTGATAAATGCCCAAAATTCTATCATCAACGTAAATCATATGTAAAACATTTGGTTACCGATCATGATATGAATTTGATAGATGTTGAAAAATCTTTAGATGATATCGAAATGATACGATGTAAATATTGtgcaaaaatttacaaacaaaatgCATCAttgaaaaaacatgaaaaattgcATGGTCCTAAAGgtaaattaattcataaatgTCCATGCTgtcgaaaatattttgaaacaaTTGAAGATGCTAAAAGGCATACAAAAGCCAAACATTCCGATCAATTAACATGTACGGTATGTCAGAAGATGTATACTGATTTGAATGCATTGATGGCGCATCGAAAACGTTTACATTCAACGATTGCAGTAACATATTCAggcaataatgatgatgatgatgatcgtgGTGATCACGATGACAATAATTCAACAGaaaatacaattgaaaaattaataaatgaaagaatgaaaaaaatgcaaCATATATGCCAGAAATGTGGTAGAAAATTTGCCAGTAAAACAGCATTAAATAATCATGAAAGATCTGATTGCGGTAAAAATCCATTATATAAATGTGATATATGCGATAAAAGATATAATAGTCATGGCTCATTAAAAACTCATCTCAATATTCATACGAAAAAAACGATATTTAATTGTACATATTGTGATAAACCATTTACAACGTATGGACAACTTAAAGTTCATGAAAGGAAACACAATGGAATTAAACCATTTAAATGTGATCAATGCGATAAGGCGTTTGCATATCGTGAAAGTCTTTTCACTCACATGTCAACGCATACTGGTATTAAACGTTACACATGCTATGGTTGTGGTACACGATTCTCTTGCATATCAAATTTACAAAATCATCGAACAACACATTTTAATACTTGCGGATTATTACCGTTAAATACGAAACCAATTGAATTTATGGGATATGATCGTGGCACTTTGTACATGGGAAATAAACCATTTggatga
Protein Sequence: MEKIEKQVSWSDSDESDETDEESPRKFVKNDERRCKYCVKLFRNELNVERHEKICKIGAKNTAKLVKAKDGNIRFLCDVCYRTFKFLTGLTKHKLRHEPPGGYECKFCDNTRYCTDAELQKHKEIMHMVYKCKICKEKMDNRDKYVEHILRVHDGRQLLYAICEDCGQQFRTRSVLSYHKQSMCGTIKPFTCDRCGSKFQNQWSLKNHLQIHKGEKKFCCSYCGNSFLKKGQLVVHERKHTKEKPFVCNICSKAFSYRESLVTHSSVHTGIKPYLCEACGACFSCFSNLQKHRRHRPNTCGQPQFNTNTKIAPRASFKSGKLTRQIKVGKGNLVLEGTKRPTENNANVKQEVKCKSKKSKTDKTPLKTDENHDNKNDPPSPAKNVKDENIRITDNLEKVNQFNAVAIQSTIYSEIVDDTEAEDKKTIKLENPINDAVVATTNSNDNIVHVFEVKISELSENDENEQYEHNYEIQIYNESSNNSDDNDNDYDDDKRNTENLLNQIEIINTSSNHLDDENFEAKEKEKKEILIEFDENNEDDNASLTKCVKEKSVEEVKNVAIKFDKTDTHNSCDNDDDDDDDDDDDIPLSRIKYKISLIKQQQQQQNIDKKNDNSTIDDQKIIKKCKIEITANDDNHEKFPPPPPPSESNNSDSNSNLNSKKSNHTIKDTNKLFECDKCPKFYHQRKSYVKHLVTDHDMNLIDVEKSLDDIEMIRCKYCAKIYKQNASLKKHEKLHGPKGKLIHKCPCCRKYFETIEDAKRHTKAKHSDQLTCTVCQKMYTDLNALMAHRKRLHSTIAVTYSGNNDDDDDRGDHDDNNSTENTIEKLINERMKKMQHICQKCGRKFASKTALNNHERSDCGKNPLYKCDICDKRYNSHGSLKTHLNIHTKKTIFNCTYCDKPFTTYGQLKVHERKHNGIKPFKCDQCDKAFAYRESLFTHMSTHTGIKRYTCYGCGTRFSCISNLQNHRTTHFNTCGLLPLNTKPIEFMGYDRGTLYMGNKPFG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01519593;
90% Identity: iTF_01519593;
80% Identity: -