Basic Information

Insect: Villa cingulata
Gene Symbol: -
Assembly: GCA_951394055.1
Location: OX596018.1:34151688-34156985[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.9e-05 0.006 18.2 2.9 1 23 481 503 481 503 0.98

2 18 0.0002 0.024 16.3 0.1 1 23 509 531 509 531 0.97

3 18 9e-05 0.011 17.3 1.7 1 23 537 559 537 559 0.98

4 18 2.6e-05 0.0033 19.0 3.1 1 23 565 587 565 587 0.97

5 18 0.00031 0.038 15.7 4.9 1 23 593 615 593 615 0.98

6 18 0.00011 0.014 17.1 5.7 1 23 621 643 621 643 0.97

7 18 5.2e-07 6.4e-05 24.4 4.3 1 23 649 671 649 671 0.98

8 18 1.9e-07 2.4e-05 25.7 2.4 1 23 677 699 677 699 0.97

9 18 0.00011 0.014 17.0 6.7 1 23 705 727 705 727 0.97

10 18 0.0001 0.013 17.1 6.4 1 23 733 755 733 755 0.98

11 18 5.4e-06 0.00067 21.2 4.5 1 23 761 783 761 783 0.98

12 18 6.5e-05 0.0081 17.8 8.3 1 23 789 811 789 811 0.98

13 18 7.6e-06 0.00095 20.7 8.0 1 23 817 839 817 839 0.98

14 18 1.2e-06 0.00014 23.3 7.7 1 23 845 867 845 867 0.98

15 18 0.00036 0.045 15.4 9.5 1 23 873 896 873 896 0.95

16 18 0.0003 0.038 15.7 0.5 1 23 902 924 902 924 0.97

17 18 0.0013 0.16 13.7 4.3 1 23 934 956 934 956 0.99

18 18 2.1e-05 0.0025 19.3 4.5 1 23 962 985 962 985 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.9e-05	0.006	18.2	2.9	1	23	481	503	481	503	0.98
2	18	0.0002	0.024	16.3	0.1	1	23	509	531	509	531	0.97
3	18	9e-05	0.011	17.3	1.7	1	23	537	559	537	559	0.98
4	18	2.6e-05	0.0033	19.0	3.1	1	23	565	587	565	587	0.97
5	18	0.00031	0.038	15.7	4.9	1	23	593	615	593	615	0.98
6	18	0.00011	0.014	17.1	5.7	1	23	621	643	621	643	0.97
7	18	5.2e-07	6.4e-05	24.4	4.3	1	23	649	671	649	671	0.98
8	18	1.9e-07	2.4e-05	25.7	2.4	1	23	677	699	677	699	0.97
9	18	0.00011	0.014	17.0	6.7	1	23	705	727	705	727	0.97
10	18	0.0001	0.013	17.1	6.4	1	23	733	755	733	755	0.98
11	18	5.4e-06	0.00067	21.2	4.5	1	23	761	783	761	783	0.98
12	18	6.5e-05	0.0081	17.8	8.3	1	23	789	811	789	811	0.98
13	18	7.6e-06	0.00095	20.7	8.0	1	23	817	839	817	839	0.98
14	18	1.2e-06	0.00014	23.3	7.7	1	23	845	867	845	867	0.98
15	18	0.00036	0.045	15.4	9.5	1	23	873	896	873	896	0.95
16	18	0.0003	0.038	15.7	0.5	1	23	902	924	902	924	0.97
17	18	0.0013	0.16	13.7	4.3	1	23	934	956	934	956	0.99
18	18	2.1e-05	0.0025	19.3	4.5	1	23	962	985	962	985	0.96

Sequence Information

Coding Sequence: ATGAATACCGAACATACGGTATCTGGTGGTGAGACAACCGCAAATTCAAATGATGCTCAaatgcaacaacaacagcaacagcaacctAGGCATTCTCCAGCTCCATCACAACaatcacaacaacaacagcatcaacatcatcaacaacaacatcagcaacagcaacatcatACTCTTCATtctcatcaacaacaacaacagcatatTGATgagtacaatcatcataatagtaACGTTAACcaacaacaacaacaacaacagcaacaacaacatgcacaacagcaacagcaaacTCACGAAAGTAGAGGTCTTGTCGGTGGAGTTATTCAACCTGTAAGCGAAGCTGATAATAAACATTCAATACAAATTCCTAATGCTCCACATcTTGGAAAATATTGGGTTGTTACGAATTTATTTCAAGGACCCACACAAAATGTTTTTAACATAACTTCAACATCACCAACATCATCATCTGCATCAAATACAATGCCACCACCTCCTCTTCCACCGTCacatataacaacaacaataaatacAATAACCAAAGATAATATTAAGCAAGAAGATGTTATTATGCAATCACCTCGTCATCATCAACAAATTATACAATCAGCAACATTACAgcaaatttcaaatcaaattataaatgcTGCAAATCAACAAATAACCAATGGTATAATATCATCTGCCGTACCGCCTGAACATATTCAGGTATCTGTAAATCCAGAAAATAGTATGATGGTCATAGATACTTCGAATACAAAAACCGAAAAAATCAATATATCACAAGAAGAAATATCTTGTGATGCTTCAATGTCAATAATTAGACAGCCAACCCATACAATACAATTAGATcatataaaagaagaaaaaccatTTATTAATTGTAAAATTCAACCACATCAACAACAAATTCAGTCGCACAATATTACTACTGATACGAAAATGCAGCTACCTCATATTGTGGATGTTCGTAGCGCTGATggatcaataataaaaatacaagatCAGGAAATTGGAAAATCACTTGGTGTTGAGATGTATAAAGTTAATATTGATGATCTAAGTCAATTCCTAACATATCATGAAGTTTTTGGTAAATTACAAGGTGATGTAATGAATCATCAGATATCTCATACAACCACTCAACCAACAAATACAACAGTAACAAATGTTTCTGGAATAGTAACATCGACAAATTCAAGTACAACAATTGTAAGTAATATTGTGAATCCATCAGTTGTAACAGCAGGTACTGGAGTATTAACAGAAACAGCAAATGCGACAACAACAGGAACAACTGGTACGGGAGAACTTTTAATGCCGAAAATAGAATCAGTCACTCAAATTTCTGACATATCAACTCCAGGTGCCACTGCAACTACGACAACTATCGCAGATCCTCATATAATCGGCGATGGTACAAATACTCCAGCGACACATACCTGTGATATTTGCGGTAAAATGTTTCAATTTCGATATCAATTGATCGTTCATCGACGATATCACAGTGAACGAAAACCATTTAATTGTCAAGTGTGCGGACTAGGATTTACATCTTTGCCAGATTTAACTCGGCATGGAAAAATTCATATTGGATGTCCAATGTTTACGTGTACAGTGTGTTTTCATGTATTTGCTAATGATGCTAGCTTAGAAAGACATATGAAGCGTCATTCAACAGATAAACCTTTCGCTTGCACAATTTGTCAAAAGACATTTGCACGAAAGGAACACTTGGATAATCATTTTCGAAGTCACACAGGAGAAACTCCATTTCGATGTCAATTTTGTGCTAAAACTTTTACTCGTAAAGAACACATGGTCAATCATGTTAGGAAGCATACGGGAGAAACGCCACATCGATGTGATATTTGTAAGAAATCATTTACACGAAAAGAGCATTACGTTAATCATTATATGTGGCATACAGgagAAACTCCTCATCAATGTGAAGTTTGTGGCAAAAAATACACTCGAAAAGAACATCTTGCAAATCATATGAGATCACATACAAATGACACTCCATTTCGATGTGAAATTTGTGGAAAGAGTTTTAGTAGAAAAGAACATTTCACCAATCATATACTATGGCATACAGgCGAAACACCCCATCGTTGTGATTTTTGTTCAAAGACATTTACAAGAAAAGAGCATCTGTTGAATCATGTTCGTCAACATACTGGAGAATCACCACACCGTTGCACATATTGTTTGAAAACATTTACGCGTAAAGAGCACTTGGTAAATCATGTACGACAGCATACTGGTGAGACACCGTTCAAGTGTACATATTGCACAAAAGCTTTTACTAGAAAAGATCATATGGTGAATCATATTCGCCAACATACTGGTGAATCACCTCACAAATGTACTTTCTGTACAAAAACATTTACCAGAAAAGAACATTTAACGAATCATGTGCGACAACATACTGGCGAATCTcctcataaatgtacatattgtaaGAAGACATTTACCAGGAAAGAGCATTTGACTAATCACGTCCGTCTTCATACTGGTGATTCACCTCATAAATGTGAATATTGTCAAAAAACGTTCACTCGTAAAGAACATTTGAATAATCATATGCGACAACACTCCAGTGACAACCCACATTGCTGTAATGTGTGCAATAAACCTTTTACTAGAAAGGAACATTTAATTAATCATATGTCTCGTTGTCATACGGGAGATCGACCATTTGCATGCGAAACTTGTGGTAAATCGTTTCCACTAAAAGGAAATTTATTGTTCCATCAAAGAAGTCATACTAAAGGTCAGGATGTTGCACGTCCATTTAGATGTGACAAATGTCCAAAAGATTTCATTTGTAAAGgTCATTTGGTGTCACATATGCGTTCTCATTCCGGTGTGAAACCtcatatttgtacattatgcAATAAATGCTTTGTTGAAAAAGGTAACTTGAAGcgtcatataaaaatgaatcaccCAAACGTGACGGTACCAACATCAATAATGGCAACCACAACCACAATAAAAACCGAAGCAAATACTGGTGATACAGTAGTGACCACATCAACACCGCAATATATAcatgaaaaaattcaattaactAAAGCGAACTTGTTACCAGTTAATAATTTAGTGCAAACTCAGTCTCCTATAATGCACACCATACAGCAAATAACGTCTACGGCCGAAACGACAAATTCTAATACAGTGAATAATACAACTACTCAAATAGCAACTGGATTAGTTCCGATAGTTACTTCAACTATAACATCACATTCAAgtcaacagcaacagcaacagcaacagcaacagcagcatcaacaacaacaacaaaaacaacaacagcaacagcagcaacataTTTCATCACAAATTCATCAAACTCCTTCTCATCATCAGCAGCAAACTAGCACAAATCCAAATGATCAATCAAATCAACCAGTACCAATTACGATAATTCAAGCAAATGATCCGGCATCACTTGCTCGAGCTGCTATTCAACTTCAACATTTACCAGCAACAAATGTTGAACAACATTCAGtggtatattaa
Protein Sequence: MNTEHTVSGGETTANSNDAQMQQQQQQQPRHSPAPSQQSQQQQHQHHQQQHQQQQHHTLHSHQQQQQHIDEYNHHNSNVNQQQQQQQQQQHAQQQQQTHESRGLVGGVIQPVSEADNKHSIQIPNAPHLGKYWVVTNLFQGPTQNVFNITSTSPTSSSASNTMPPPPLPPSHITTTINTITKDNIKQEDVIMQSPRHHQQIIQSATLQQISNQIINAANQQITNGIISSAVPPEHIQVSVNPENSMMVIDTSNTKTEKINISQEEISCDASMSIIRQPTHTIQLDHIKEEKPFINCKIQPHQQQIQSHNITTDTKMQLPHIVDVRSADGSIIKIQDQEIGKSLGVEMYKVNIDDLSQFLTYHEVFGKLQGDVMNHQISHTTTQPTNTTVTNVSGIVTSTNSSTTIVSNIVNPSVVTAGTGVLTETANATTTGTTGTGELLMPKIESVTQISDISTPGATATTTTIADPHIIGDGTNTPATHTCDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGLGFTSLPDLTRHGKIHIGCPMFTCTVCFHVFANDASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGETPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHVRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTFCTKTFTRKEHLTNHVRQHTGESPHKCTYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQDVARPFRCDKCPKDFICKGHLVSHMRSHSGVKPHICTLCNKCFVEKGNLKRHIKMNHPNVTVPTSIMATTTTIKTEANTGDTVVTTSTPQYIHEKIQLTKANLLPVNNLVQTQSPIMHTIQQITSTAETTNSNTVNNTTTQIATGLVPIVTSTITSHSSQQQQQQQQQQQHQQQQQKQQQQQQQHISSQIHQTPSHHQQQTSTNPNDQSNQPVPITIIQANDPASLARAAIQLQHLPATNVEQHSVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -