Vcin036236.1
Basic Information
- Insect
- Villa cingulata
- Gene Symbol
- TRERF1
- Assembly
- GCA_951394055.1
- Location
- OX596024.1:26438347-26442923[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-08 3e-05 25.2 0.1 3 45 825 867 823 868 0.94
Sequence Information
- Coding Sequence
- ATGCGATTACATGGTGGCTACTTTAAAAAAGATACTGAAacaaaaaaatctgaaaaaaaagaatCTTCTGGACCACCACTACAAACGGCCAGTATTGGTGTTAGAGctttaattgaagaaaaaattattagtaAACGAAGCAAAGATTTAAAGGGTGCCTTTGTAGTTCCTGCCCCTCCTTTAACTTCAGttagaaaaattgaaagtgaAAATAGTTTTTTAACACCGAAAACGCCTAATCAATTAACAGCGGCAGGAACAACAACTGGGACAATAACGAATATGGTTCAAGGAACTGTAACTGCATCGATGCAACTACAAAAGCAAAATATCCAAAAGGTTACGAGTGTTGCCACTTCCACACAAAATGCTACTACAGATACTAAAGATGCCACTTTGATCGAGCTACTAAAGCGTGGAACGAAGCTTGCAGTGAAACGAACATGTTCGGATCCAGgacaaatttataataacaaCACATCAACAATTGTTTTACCGTCAGATCCATCGATTTCTGCAACAAATACACCGAATCCAACACCGCCATTATCTATATCACTTCCAGGTGAATCAACTCCTCTGTCTTTAACGATTTCACAGGCTGCAAACGGTGCTGGAGATGTTTTCACATTAACGTATTCTGCCGACTCTTCAACAACATTTTTTGGAGATTCGGACGTTTATAGTGTTTCAGATACTGCAATGCTGCTTCAAGCAGTCGATTCCATACAACTTTTAAATGATTCCACCACTGCTGAACAGCTAGATGAGATCGCTTCTCTAAGTGAATACTCTTTGACTAGTGATAATAATACGATCTCTGACAGCAACAGTTTAGGCCGAGAATATGTGACGTCATCGAAACAATTGCAAGCTGTCCTTAATTCACCACTTCCAGAAGGCCTAGCTGATTTCAGCACTCTTCATTCCAAGGATTATGTTTTGTACAACTGCACTAATAATGCATCACCTGCAACTCAGTCTTCAGCTTCTCCATTGCCTTCACCTTTAGCATACCCGACTCCACCAGCAAGTCATGAGGCTGTTGCACAATCTTCACCATTTTTAGATGATTCACATCATTTCTCTGAAACAAATGCATTCTTTGATGAAAAAGtcagtaataattttattgaagaaaatagCAGTCAATTTTTCAAAAGCACAAACGATGCTAACatgacagaaaatgaaaaaatactgAAACTCAAGAACGAACTATTTAACGAAAGCAAAAGTGTTCTCGAAGTGAACGACACGTTTTTTAAAACTGAAGACACCAGTGACGTTTTCGATAATCCAGTAAAAGTTGAGGatcttttaaatgaaaacaatgGCGAGCCATGTGATCTTAAAGATTTCTCTACACAAAATCTTTCATTCCTAGATGAACCACAGAATTTCTTAGATGATGCTAGAAATCCACCTTCTCCATTATCCGAGTCCTTTTTCACAAGTGCCATAACAAGTGCTGAAGAAGTTAAAGAAGCTTTAAAAGATGTTCTACCAAATGAAACACTGCATAACGAAAGTAGCAGTACTAATGACATTGATCTTTACTATCTACCAGGATTAACTCTGCAATCACAAATGATGCCTAACTCAGATGATCCTTTACTGTCATCATCACCAAAGGATTTCGTTCAGAGAGTGCAATTACcccaacaacagcaacatcagcATCTGCATCAACAACAACAGATTCAAATACCACTAGCTTCAATCAAGCAAGAAACTGGACAAATTTATAGCATTCCAAATGCGAAGAAAATAAGATCTAATGAAGATTTGCCACCAATTATCACCGTTCAATCACAACACATTGTTCCTCAACAGCATGATATCGATCGATTCGTTAGTCATGCTGCAAATTTTAACAACAATAATACAGTTGTCATCTCTCATCCGACTGCTCCTCCTCCTCTTCCTCCTGCACGTTCTAATTTCCATCAAACCTTCACGAATTCCATCCTAAAACGAAGATTACGTCAAGGGCAAACAAAGAAAACAGAAATTTATCGTTCAAAATTACGAAAACCGTCAACAACACACTATACCCCATCACCAATGCTAAATCCTGACCGAAAATCATCCGGACTTTATTCAAATCTACCAAAAGCGATACTGCAGGACACTATTGATCTAGTAGATGAGTTCGACGATGCTGCCAGTTTGGTAGCATTTCTTGATGATTCTAAAGTAAATATTGGAACAGCATATCAGGCAACAATTCCTTCTGCTGGACAGAATTCGAATTACAATAATGAAGAATACGATGAATTGATGTGGGATCCAAATGTAACAACTAACGATAAACTTTTAACCAGATTTATTGAATTGAGTAAATCATCGGCAGTTCCATTAGGATTTCATTCAGAAGAAGTAGCACTAAAAGCACTACTAGATGCTCAGGGTGAAACACATATTGCTGTTCTAAATTTACTTCAGACACCATCAAATCATGTACATTTGAAATGGTCAACTGATCAAATTGAGGCATTCCTAAAGGGTTTGGAAAAGCATGGAAAAGACTTTTATCGAATAGCAAAAGAgATATCATTAAAATCATCTGGTGATTGCATTCAgttatattatttttggaaaaaattatgTGCCGATTATAAAATTACTCATCTAAAACAGGATTCAGATTCATCTATTGACAGCAACCAATCAAATCACTCACATTCAGAATTACGACCCCATGTTTGTGAAATGCCAGATTGTTCAGCTAGTTTTACTTCGAAGGCAGCACTCCATGGACATACGAGAATACATTGCATCGGTAGAAATTTAAATCATTCTGGAAATAATAGTCAAACGTTAGGACATAATATATCATCTTCATCGCATGGTACAAATATTAAAGATGATTTTCCCTGCAAGGTGTGCGGCAAGGTGTTCAGTAAGGTGAAAAGTCGTAGTGCACACATGAAATCCCATCGACCTCAGGAAAATGATCCTAACATAAATTcctaa
- Protein Sequence
- MRLHGGYFKKDTETKKSEKKESSGPPLQTASIGVRALIEEKIISKRSKDLKGAFVVPAPPLTSVRKIESENSFLTPKTPNQLTAAGTTTGTITNMVQGTVTASMQLQKQNIQKVTSVATSTQNATTDTKDATLIELLKRGTKLAVKRTCSDPGQIYNNNTSTIVLPSDPSISATNTPNPTPPLSISLPGESTPLSLTISQAANGAGDVFTLTYSADSSTTFFGDSDVYSVSDTAMLLQAVDSIQLLNDSTTAEQLDEIASLSEYSLTSDNNTISDSNSLGREYVTSSKQLQAVLNSPLPEGLADFSTLHSKDYVLYNCTNNASPATQSSASPLPSPLAYPTPPASHEAVAQSSPFLDDSHHFSETNAFFDEKVSNNFIEENSSQFFKSTNDANMTENEKILKLKNELFNESKSVLEVNDTFFKTEDTSDVFDNPVKVEDLLNENNGEPCDLKDFSTQNLSFLDEPQNFLDDARNPPSPLSESFFTSAITSAEEVKEALKDVLPNETLHNESSSTNDIDLYYLPGLTLQSQMMPNSDDPLLSSSPKDFVQRVQLPQQQQHQHLHQQQQIQIPLASIKQETGQIYSIPNAKKIRSNEDLPPIITVQSQHIVPQQHDIDRFVSHAANFNNNNTVVISHPTAPPPLPPARSNFHQTFTNSILKRRLRQGQTKKTEIYRSKLRKPSTTHYTPSPMLNPDRKSSGLYSNLPKAILQDTIDLVDEFDDAASLVAFLDDSKVNIGTAYQATIPSAGQNSNYNNEEYDELMWDPNVTTNDKLLTRFIELSKSSAVPLGFHSEEVALKALLDAQGETHIAVLNLLQTPSNHVHLKWSTDQIEAFLKGLEKHGKDFYRIAKEISLKSSGDCIQLYYFWKKLCADYKITHLKQDSDSSIDSNQSNHSHSELRPHVCEMPDCSASFTSKAALHGHTRIHCIGRNLNHSGNNSQTLGHNISSSSHGTNIKDDFPCKVCGKVFSKVKSRSAHMKSHRPQENDPNINS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01519872;
- 90% Identity
- iTF_01519872;
- 80% Identity
- iTF_01519872;