Vcin008233.1
Basic Information
- Insect
- Villa cingulata
- Gene Symbol
- Dnajc1
- Assembly
- GCA_951394055.1
- Location
- OX596018.1:2461836-2463832[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-05 0.062 14.6 0.0 4 38 301 338 298 339 0.89 2 2 1.4e-10 2.5e-07 31.9 0.2 3 44 391 437 389 439 0.88
Sequence Information
- Coding Sequence
- atgaagtacacgttttttagttttttagttatatgttattttgtctGTAATGTTAAATCATGGGATACGGATGAAttagaaatttttgatttggTAGAGGAAGTTAATCAGAACTTTTATGAATATATGGGAATTAATCAGGATGCCACTAATCAACAACTTAAACGAGCATTCAGAAATCTTTCAATTGTTTTGCATCCAGACAAAAATCCAGCAGAAGATGCgaacataaaatttagaaatttagtAGCTATTTATGATGTATTAAAAGATCCGTCTAAACGtgaaaaatatgataaagtTCTTAAAGATGGACTACCCAATTGGAAATCAGCTCTGTATTATTATCGACGTGTCAGAAAAATGGGATTAGCAGAAATGGCAATTAttcttttcataattataaCCATTGGTCAATACTTTACATCATGGGCAATTTATTTGGAAAGAAAATACACAGCGGAGCAATTATTTGGTACAagaaaaaaacgtaaaaataaGGCAAATGTAGATATAGATGCAATTATTAGTGAAATTCCATTACCAAGTATTTACGATACCCTACCATTTCAAATACCGCGAGCTATTTGGTATTTTCCAACAACAATCAAATCAGCTTTTGTaacaataaatgaattaaaagaaaGAGAACTAGAAAAGAGAAGATTagaaGCTGAGGAAGCAGAAAAGCAGAGATTACGTGAAGAGGAGATAGCAAAAGAAAAGGAAGCAAAAAAAGAGCTAAAGGAAGCTATTCGCAAAAGAAAACAGGCAAAAGTTGCACCAGAAAAAACTGATGAAGAACTTGCTGGGTATTCAGTTCTAAAAGTAAAAGAACTCACAGACGAAGACGCAGTTAAACCAGTAAAAAGCACGAAAATTCAATTAACAGGAGGTTTTTGGAGTGATGAAGATTTGGTGGAATTAGTTCGTTTAGTTAAAAAATACCCTGGTGGTACGTCAAATCGATGGGAGATAATAGGAGAAACAATGAATAGAAGTGTAGCCGAAGTTACGTTTATGGCtgcaaaattaaaagaaaatggatATAGAATACCAGGTCATACTGATAGTGTTGCTGAGAACATTATTCAAGAAATGGAagagataaaaaaaacaaaagaaaaaataaaaaaaggtcAACAACATTCAGTATTAGTTCCCGAAACAAACTGGTCACAAGAGCAGCAAAGAGCATTAGAAGCTGctattatcaaatataaaaaaactggAAGTTCAGATAGATGGCAAAAGATCGCGAATAGTGTACCAGGTAAAACAAAAGAAGAATGTTTATTACGATATAAATATTTAGTGGAATTAATAAAATCTCAAAAGCAAAATGATTCCAAGGATGTGAATAacgaagaaaatcaaaattatagtGCAAGCAATACTGAAAACAATGATGAATCTTGTGTAACTGAAACGGACGCAGAAATATCTAAACAAAAAGATGCAGACCAAGAAATCTTTATTACTGAACATCAAGAAATGACTGTCGAAGAAACTACTAAAAAGCAAGGTAAGCCGAGAAATAAACGAAAAGAGAGAAAAAAGCGTCAAGAATTTTCGGATGAAGATGATTCTTCAAactaa
- Protein Sequence
- MKYTFFSFLVICYFVCNVKSWDTDELEIFDLVEEVNQNFYEYMGINQDATNQQLKRAFRNLSIVLHPDKNPAEDANIKFRNLVAIYDVLKDPSKREKYDKVLKDGLPNWKSALYYYRRVRKMGLAEMAIILFIIITIGQYFTSWAIYLERKYTAEQLFGTRKKRKNKANVDIDAIISEIPLPSIYDTLPFQIPRAIWYFPTTIKSAFVTINELKERELEKRRLEAEEAEKQRLREEEIAKEKEAKKELKEAIRKRKQAKVAPEKTDEELAGYSVLKVKELTDEDAVKPVKSTKIQLTGGFWSDEDLVELVRLVKKYPGGTSNRWEIIGETMNRSVAEVTFMAAKLKENGYRIPGHTDSVAENIIQEMEEIKKTKEKIKKGQQHSVLVPETNWSQEQQRALEAAIIKYKKTGSSDRWQKIANSVPGKTKEECLLRYKYLVELIKSQKQNDSKDVNNEENQNYSASNTENNDESCVTETDAEISKQKDADQEIFITEHQEMTVEETTKKQGKPRNKRKERKKRQEFSDEDDSSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -