Vcin034446.1
Basic Information
- Insect
- Villa cingulata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_951394055.1
- Location
- OX596024.1:1581861-1584488[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-15 3e-12 47.3 0.0 1 44 11 55 11 56 0.93 2 2 5.5e-18 2.8e-15 56.9 0.0 1 43 467 510 467 512 0.95
Sequence Information
- Coding Sequence
- ATGACAACCATATCGGGTCGTAGAACATATACTGAAGATAATTTACATAGTGCACTTCAAGATATAATTAGTGGTAAATTAGGTACAAGACGAGCTGCTGTTCTATATGGAATACCTAGATCAACATTACGAAATAAAGTGTATAAAATATCATTAGAGCAAAAACGTGAAACATCTTCTCTACATCAGCCGACAATTGATGAACTAGTCGATCCCGATGAAGAGGATAAGGATATCTCAGGTGATgaagaaaaagatgaaaaattgaTAGGAAGTTCCTTATTAGGTCAATCTGATGATCTTGCCCGAATAACACAATCACAATTAACATCACAACTAGCTGCAGCCGCCTTTCAAAAACTAAGCAAAAGTTGTGATAGCAGTCCTTTAGATGTAAAACCATCAACATCACTAGATGCTCAAACGAAAATGCAATCGAACGTTACgcagcagcagcaacatcaacaccagcaacagcaacaacagcagcaacaccAACAACAGCCACCCCAAACACCTCCAATAACAACAAATCCCTGGCTTGATCCAAATGTTTTATTCCAAAGTTTACTGTTAACTAGTGGTCTTAGTGGTATTCCAGGTTTATTACAGCCAAAAATTGAAGATCCTGCTGCTATTAGAGAATTATTTAGTAACCTGATGGTACAACAAGATGAACTgataaaagagcatatgaaaaataCAGCAGTAACAGCCAATGATTTGTTAGCAAATAGCAAGGCTGCAATCGATCCAAGAATTTTGTTACAAAATCTGCCTGGATTACAGCAACATCAACAGTCACAACATTCATTACATCATGGATTCCAGAGTCGTTTGCCAAAGTCTGATACGCCAGAAACAGCTTCGTCTGTCGATATTAGCGAAGCAAGTGATGATCCTTCAGTCATTTTAAAAATTCCGTCCTATAAGCCTGTAGCTGGATCTTCATCATCAGGGAAAAACGGAGAAAACTTAAGTTCTCCCGTTTCTCAAGTGACACCACCGATATTGTCGCGAAGTCCACAGCAAACGAATAATATACCAAGAATATCTCCAACATTAGTACGACAAAATAGTGAATCACAGTCACCTCCTATCATATGCCTAAGGGATGTAATTGCCAACAGTTTGAGTCGGACATTTAGTCAACAAGGGAACAAAGATACACATTCAAATGCATTAAAGGGTAGTTCATCCATTGATTCGAACGAACAGTTCAAACGAGCAAGTATATCAGTTATTAAGAACATCGGTGGAACGGATATATCTAGGTTTGCGACGACTCCAAATATCCTCGCTAATAATATCAATAACAGCTCTCAGGTAGGATGTAATAATTCTGCAAATGCTGGCGGTAAGGGAACTAGACCTAAGAGGGGGAAGTATAGAAATTATGACCGTGATAGTTTAGTTGAGGCTGTAAAAGCAGTTCAAAGAGGCGAAATGTCCGTGCATAGGGCAGGAAGTTACTACGGTGTACCTCATTCAACTTTAGAATATAAAGTAAAAGAAAGGCATTTGATGAGACCACGAAAACGTGAGCCAAAACCACAACCCTTAGATGATCGAGCAGGTAGTTCTAATAATAGTTCTGTAAGCACGAAAAACACAAACATTCCAAGCATAAGCGCAGTTAGTAGTTTAGATAAACTGAAGACATCGGCGACAACACAGAAGCCATCTATTAAGAATAACCCACCATTTCCAAGTACATCACCAAATGGCATGAAAGTGCCCATATTTGATCCAGCAATGACAGCTCAATTCCAATATGCACCGCACTTATTTTGGCCACATTCCACAGGCTTTGGAACTTTACCTATCGATTTTCAAAGACCACCAGCTGGAACAGCAGCTCCACCTTCATTCCCATCGAATGCAGAAGGCTTTCTAGCAACACAAATGATGCAAAGATTTCATGAAGAATCAAATCGACTAAGTGGAAATAGTTTAAGTTCAACAagtacaacaacaacaacttcAAACTCGGTAACAAACACGAAACCAATAAATTCTGGCACAAATTCAAATGTGAAAAGTACACGTCAAATAGCTGAAAGCCTATACGATTCTGGTGGAGCAAATGGTTCATTTTTAGATGGCATTATACGACAGACATTAGATCGTAAGACAACAGATATACCGCATGGTGCCCTTCTTGATCAGCTTGTTAAAAATACAAGACCTCCAGTTTTAAGTAGTAGTTTAGAGCAAcagttatcatcatcatcatcagcagcagcagcagcaacaacaacaacacatcAAACAAAGACCAAAAGACCTGGTAGCCCAGTACATTATCCTGTGATTGATATAAAAAGAGAACGTTCAAGTCCTGTAACAATAGTATCTAGTGATATTGATCGTAATCCAATAGATTGTGATTTAAAAATGGATGAtaaacagcaacagcaacaacaacaacaacttgCAATTCAACACCACCATACAGCAGCACTTCATTTActtcagcaacaacagcaacaattacaacaacaacaacaattatctGGGAATAGTATACGACATTTATCAATTGAAGATTTAAATGGCGGTGGTAGCAGTGGAAGTATTCACGATAAAATAGGACAAATTAAAACTGAACTCGAAGACAGTTTATAG
- Protein Sequence
- MTTISGRRTYTEDNLHSALQDIISGKLGTRRAAVLYGIPRSTLRNKVYKISLEQKRETSSLHQPTIDELVDPDEEDKDISGDEEKDEKLIGSSLLGQSDDLARITQSQLTSQLAAAAFQKLSKSCDSSPLDVKPSTSLDAQTKMQSNVTQQQQHQHQQQQQQQQHQQQPPQTPPITTNPWLDPNVLFQSLLLTSGLSGIPGLLQPKIEDPAAIRELFSNLMVQQDELIKEHMKNTAVTANDLLANSKAAIDPRILLQNLPGLQQHQQSQHSLHHGFQSRLPKSDTPETASSVDISEASDDPSVILKIPSYKPVAGSSSSGKNGENLSSPVSQVTPPILSRSPQQTNNIPRISPTLVRQNSESQSPPIICLRDVIANSLSRTFSQQGNKDTHSNALKGSSSIDSNEQFKRASISVIKNIGGTDISRFATTPNILANNINNSSQVGCNNSANAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDDRAGSSNNSSVSTKNTNIPSISAVSSLDKLKTSATTQKPSIKNNPPFPSTSPNGMKVPIFDPAMTAQFQYAPHLFWPHSTGFGTLPIDFQRPPAGTAAPPSFPSNAEGFLATQMMQRFHEESNRLSGNSLSSTSTTTTTSNSVTNTKPINSGTNSNVKSTRQIAESLYDSGGANGSFLDGIIRQTLDRKTTDIPHGALLDQLVKNTRPPVLSSSLEQQLSSSSSAAAAATTTTHQTKTKRPGSPVHYPVIDIKRERSSPVTIVSSDIDRNPIDCDLKMDDKQQQQQQQQLAIQHHHTAALHLLQQQQQQLQQQQQLSGNSIRHLSIEDLNGGGSSGSIHDKIGQIKTELEDSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -