Vcin016300.1
Basic Information
- Insect
- Villa cingulata
- Gene Symbol
- kn
- Assembly
- GCA_951394055.1
- Location
- OX596019.1:45055788-45108181[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-234 4e-230 766.3 0.0 10 384 61 451 53 455 0.98 2 2 9.2e-11 2e-06 27.7 13.8 421 514 455 553 451 567 0.75
Sequence Information
- Coding Sequence
- ATGTCGACATTCGACATCCGACATGGTGTAATCTCGGCTTCACCATGGCCAACATTAGAATTAGAATGGGGTCGAAAATTATATCCGTCAACTGGACCACGTACAGCTGGTGGCCTAATGTTCGGCTTACCTCCGACAGCTACAACTGGTACAGATCTAAACCAGCCAAGAGGACCAATGACATCATTAAAAGAAGAGCCATTAGGTGCTAGGGCATGGATGCAACCGACAGTTGATCAAACAAATCTTGGTATTGGTCGAGCACATTTCGAAAAGCAACCACCTAGCAATTTAAGAAAAtcgaatttttttcatttcgtcaTTGCATTATATGATCGTGCTGGTCAACCAATCGAAATCGAAAGAACAGCATTTATTGGTTTCATTGAAAAGGATCAAGAATCAGAtggacaaaaaacaaataatggaATACAATATAGATTGCAGTTATTGTATGCGAATgGTGCAAGACAAGAACAGGATATTTTTGTACGTCTTATTGATTCGGTGACAAAACAGgcaATCGTATACGAGGGACAAGATAAAAATCCAGAAATGTGTCGAGTTCTGTTAACCCATGAAGTTATGTGCAGccgATGCTGTGATAAAAAAAGTTGTGGTAATCGAAATGAGACTCCATCAGACCCGGTTATCATTGATCGatttttcctGAAATTCTTCTTGAAATGTAatcaaaattgtttaaaaaatgcTGGAAATCCTCGTGATATGAGACGATTTCAGGTTGTGATAGCAACACAAGTATCTGTTGAAGGACCATTATTAGCTATATCCGATAATATGTTTGTTCATAATAATTCGAAACATGGTCGTCGTGCTAAACGTATGGATGCAACGGAAGGTACTGGAAATTCTCCTATCGGTATAACCGGGCATCCCCTTGCACCTGACAGTACATACGACGGACTCTATCCACCCTTACCAGTTGCAACACCATGTATTAAAGCGATTTCACCGAGTGAAGGATGGACGACTGGTGGTGCAACTGTCATCATTGTTGGTGATAACTTTTTTGATGGCCTTCAAGTTGTCTTCGGTACAATGTTGGTTTGGAGTGAATTGATCACATCGCATGCTATACGTGTTCAAACACCCCCAAGACATATTCCTGGAGTAGTTGAAGTAACTCTATCCTATAAGAGTAAACAATTTTGTAAAGGATCACCAGGACGATTTGTTTACGTCTCATTAAATGAACCAACAATAGATTACGGATTTCAaagattacaaaaattaataccAAGACATCCTGGAGAtccagaaaaattacaaaaggaAATCATATTGAAGAGGGCTGCAGATTTAGTTGAAGCGCTTTACTCGATGCCAAGTAGATCACCTAGTGGTACAAGTGGTTTTAATTCGTATGCTGGACAGTTGGCGGTCAGTGTACAAGACGGTAGTGGACAATGGACAGAAGATGAATACCAAAGAGCACAGAGCAGTAGTGTTAGTCCTCGTGGTGGTTACTGTAGTAGTGCATCAACACCACATTCATCTGGCGGTTCATATGGTGCTACAGCAAATGGTTATGGTCCAACAccaaatatgggtacattatcaTCGTCACCGGGAAGCGTTTTCAATTCGACGTCAAgcAGTGCATTTTCACCACTTATAACTACAACAACATCTCCATGGCATCAAGCATTAATTCCACATCATCACCACCATCAATCCTGGCATAATCCTCAGGCGACAGCGACTGCTGCCACAGCtgtttaa
- Protein Sequence
- MSTFDIRHGVISASPWPTLELEWGRKLYPSTGPRTAGGLMFGLPPTATTGTDLNQPRGPMTSLKEEPLGARAWMQPTVDQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDQESDGQKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVSVEGPLLAISDNMFVHNNSKHGRRAKRMDATEGTGNSPIGITGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPSGTSGFNSYAGQLAVSVQDGSGQWTEDEYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATANGYGPTPNMGTLSSSPGSVFNSTSSSAFSPLITTTTSPWHQALIPHHHHHQSWHNPQATATAATAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00251134;
- 80% Identity
- -