Basic Information

Gene Symbol
ARID5B
Assembly
GCA_951394055.1
Location
OX596019.1:45722536-45736764[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-13 9.8e-10 39.9 0.4 2 89 656 736 655 736 0.85

Sequence Information

Coding Sequence
atgttacaaGTGATTGGAGGACCATGTGGATTTCACGGTCCATATACATTTTACAAAGGTATTCAAATAACTCCAATTTAtgcaataaataatacaaacgGTCAAAAAAATCACTTATACACGAATTCAAATAATTCaacaaatttaacattaaataaaaataagccAAACACAAGAAAATGTGTCAGTGATAAACGTACAGATAATGGAATGAATAACACAACAAGatgctCAAAACCACTAATTCTAGCATTAGGTGACTGTATACCAGTACGACCATGGACAGATTCACCGATTGCATGTTTAGCTGAAGTTCGAATGATATGGAAAGATAAAAATGAACCATCATTATTGACTGGTTTACGATTATATTTTCTACCAGAAAATACTCCAATGGGTAGAAATTGTCATGGTGAggATGAAGTTGTTGCTATATCCGATAAAGTAGTTATTCGAGCTGAAGATTTACCAACATGGTATGATGATAAATTACAATGGAATTGGGGTTTAACAAGAACCCGTGGCATAAAGGATGAAACAATTACATCATCATCAGTAAAAGAAACCACAACAATAACACTACCAGCATTACCATCGTTAACACAAAAATCTTTATCACCGCCACCATCATCACCACCGACAATtgtaacagcaacagcaacagcaacaattgtaacaacaacaacaacagtaacaacgacaacaacaataacagaaGCACCTACAGCTACACCAAATGTATCTGTTGCAGATACACTCACAACAGATAATAATTCAGCAACAACACcaacagaaacagaaaaaacAGAAACTGAATCAGAACTAAAAACAGAATTAGAAACAGAATTAgaaacaaataaattgaaatgcaTAAATGCAAATAATATCAACAATAACAGATCGAATtgtcttaataataataataataataataatagtagcaTAAACGACaacaacataaataataataataataataataataataataataataatattaatagtagtagtaattcCAGTCAtagtaattgtaataataattttaataataataataataataataatagcagtaatattaatgataataaCCATAGTAATACCaacaataatagtaatagtaatggTAGCGGCGATTATGTTCCTGTAAATAAAATCACATCCTTAAGAAGTTCACAATTGGATTTTAGTGAAGTGAATAAAGAGAAACAAGCAAACGATTCACAAATTAAAATTGCAGTCTTAAGTTATCCTAGATACTGCCGTTATAGAGCAACATTAAAACGTTTAGAAGGTTTAGATGATGAATGGTTTAAGAATTCGGTAGTTGGAGCATTATGCGGATTTTCGGCAGCTACCTCAGATTTTCGTGTAATGTTCTGTCGTGATACATTCGATTATCCAGAATTAGAAACCCATGAGCTTTTATGTAATCATTTGGCACCAAAATTGAAAGGTCGTCCGCGCggtagaaaaaagaaaatccgATCAGAATCACCATTTACTGGTGGTCGTAGAACATTCGATTCAGATAGTGAATCAAATGATTCAGATATTTCGATATTTTCACTTGGAAAGgGTACATGTACACCGATACAACCGAGACCACATTTACGTTTCAATCATAGACCATTAAGAAATAAAGTCCTAAAATCAGAAATTGATTATAAACCATACAGAAAATATCAGTTGAAAAAGCAGAAAGATGTTGTCGATACCACACATTTATTGCAGCGAAGAACACGTCAGGCTAGTATCAGTAGTAACAGTAATCAGAAAATCGGTGATAAAAAGCGTTACTTACGAGCTAATTCAGATCGAAAACGTCGAGATGAAGAATCAGCATCAACTTCGTCAGCTTCATCGTCTTCATCATCCTCGTCATCGACGATATCGTTTATGTCGTCATCAAGATCATCTAAAAGACGATCATCGAGCAGTATGCTAAGTACACCAACAGAGGAGAAATTCTTCCTAAGGAAATTGCATGAATTCCATATTAAACAGAACAACATTATTCCAAAAGTGGTATGGCTGAGTTTGAAAGGAGTGCACTTGTATTCGATATTTCGGCAGGTTAAAAAGCTTGGCGGCTACAATGCTGTAACAGAAAATAAACTGTGGAAAAATTTATTCGGAGAGAAAACTGATATCCACCATATGATCACTAGGAAGAGGTATGAACGAATCCTATTACCTCTGGAAAGATCTGAATTGGTgacgaagaagaaaaatgaatacaaaaagcATACAGAAATTATGGATGATGAAAAACTTACAGAAGACATTAAAAATGAAGATAGCGACGAGGAAGTAAAAGTTGAAAAGACAGAAGAAGATCATGTAAATGAAGGAGATGTATCAAGAGTGCAGAATGAATGTAAATTGAAGGAAAATATGGAAAAAGACCAAAAAGAACAAAAAGATAAAACTAGTGATATTTGTAATGAAATTGAAACTAAACTGAAAAAGGAGAAGGAAGTGATAGAGATACCGGACGATGattctgaaaaagaaaatatacaggAACCTTGTAGAATGAAGTCTGAAAAGGAAAATTGTGAATCAGATGATGACATGCCATTGAAACTTCCATCATTCAAAATGacaataaagaaagaaaaatcaccAGAAAAATCAGAACAGGATTTGAGTGTAGAAGAAATGACGAAAATTCAAGAGCGAATCAAATCGAAGACAATGACGACACCAATACCATCTTCGTGTGAACCAAATGTCAATACAATTAGCGCAACATCGACTAATGGAAAAATTTCAGTGAATTCGAACCCTGCGGCATCTGTTTCGGTACCGGTAACTGTAATTGTGGGAACTCCAGAATCAACAAATAAATCCGACGAAGTAACACGATTGCGTGCTGATGAAAATcaacaagaaaatattcaacagAAAACAACGACTTATCCATGCACTTCACCAGCGACGAATACTAATGCTTCTTCAGATTCGACTAGTCGTAATCAGAAGCAATCATCATCACAAATACAAATTCAACAGCCGCACACAACAATTACAGTCCACCAAACAACAATTCATCCTCAGACACATTCCAATTTGGTATCCTCTACATCACCATCGACACCTTCACAACACCAAATAACAAATCAAATTCAGATCACAAATCAAATACAAATCCAACAGATCACCGTTCAGCCAAATGGAAATGCGAATGGCAAAGCGTCTGGGGAATTTTGCTGCAATTTCAAGCAAGATAAAGATTACCAGGAGgtgaaaattgaaaaacgtGACTTTAATAGAGACCGAGATAATaacgaacaaaaaaatcaaaaatacaataatcagaataacaataacaacaacaagaacaacagtAACAACAGTAAcacaaataaaacacaaattatgAGACCAttcgaaaaagaaaacattCCATTCATAGCAGCCGGAACAACAATAACCCCAGTCTTATCAACGCAGACTCCATTGCCCAAGAAATCACCGGAAGTCATCGATTTAGTAGACAGCGATGGAGAAAGTAATAGCAGTAGCATTGTTCAGCCAATTAAACCTCAGCCACCCCAACGATCTAGAACGAGGGTGAATAATCATGAGAATTTAGTTACGATTCCACCggtaaaaaagagaaaattggACATTCTGCGAGAAGGTGGTCTTGAGGTTACTGCAATTAGTAATAAACACGGAATTATTTCGACTGCACCTCCATTATCTCCAGCTTCATTACGTATTCCAACAAATTCAGCAATGAATAAAGCTGAACGTTATTTGGAAGCATCGAAATTCAATCTTCCACCAACGACAAGTCTAAGTATTCCAGTTAATGGATCCCACATAAATGTACCAAGAATCTATGCTCAAAGTATGTACACAAAAACTGAGAAGATCTTTGGTAATCCAAAGGATATACTGCCTCCGAATCCAGTTTCAAATGTTTCTGGTGAAATTTTAGATTTGACTGTGAAATCTCCTCTTAAATTTCCATCTTTAGAAATTCATCCAATTCCTACTGCAAGACATGTTCGATCTCCACCACTTTTGAATAAGCTATCCACAAATGCTACTGCTATAAACTTGACAAGCACGAGAACAAAATTACCTGAAACTGGATTACAAATAACTTTAGTGCCATCAAGTAGATCTTCAGCAATGACAATAACACCTACACCAATGCCGGCAGTTACGAAGTCGCTAGTACTACCACCAGCACCATCGCAACAACAACTACAGCAGCAGTCACAATTATTGCAGCCAATCCCACCGCAATCACAGTCACAGTCTATGCTTCAACATAAGCCTCCATTGACGTTAACGCAAAATGTACATAACTCACAGAATCACAACATGAAAAGAAAGGGAGTCGATATTCTTCCTATTCCAAATGTACCCACGCATCAGAAATATCATCCGGTTACAATAACACCCACTAATTCACTTCAACCTCCGCATCAATCTCATCATCAACCGCAGCACCAACCACAACATCAACCACAGCATCAACCGCAGCATCAATCTCAGCACCAATCTCAGCATCAACCTCAACTCCAGCCTTTAAATCAACCTCAACAATATCAGCCTCATCTTCCACCTCAACACCAATCTTCACATCAGCCCCCGCATCAAAAGCAGCAAACTAGAATTGATAAGAAAATGAACATTCCACAACCAATGGTATCAGTAGCACCACAAGTGCCACCACCGCCACCTGTAACTGTTCTTCCAATTCCGAAACGATCTTCTCCAAAGCCAGCTCCACCGTCAGTTCCAATACCAATAGCGCAATTACCATCAATACCAACAGTACCATCATCGCCTCAAGTACCACATGCACCAATACAGCCAGTACCTCCAATTCCAGTAGACGCAATTGATCCCAAATCACCATTATTCCCCTTCCCACCCTTCATTTCACCGTTAGCAGCAGCAGCTGCAGCTGCATCAGCAACAAATCAAAATCCATTTTTACCAATTATGAATccgtttttcttttcaaatttatataatcaGGCAATGGATACCAATCATCCTCTATTTATGCCAAACCAACAGAGAATTAACGAATTTTTacaattgtataaaaatttaccgCCAGAAATTACAAATAGTGTTGGATTTGTTGGCAATGGTGGTGCTGGCGGAATACCAGTACCAGGTCCAGTTCCAGTTCCAGTTGGTGTTGGTAGTTCGAGAGGAGTCGGAGCTGTCACTGGTGTAACGAATGGTGGAATTATTCCTCCAATAACGAAaagttaa
Protein Sequence
MLQVIGGPCGFHGPYTFYKGIQITPIYAINNTNGQKNHLYTNSNNSTNLTLNKNKPNTRKCVSDKRTDNGMNNTTRCSKPLILALGDCIPVRPWTDSPIACLAEVRMIWKDKNEPSLLTGLRLYFLPENTPMGRNCHGEDEVVAISDKVVIRAEDLPTWYDDKLQWNWGLTRTRGIKDETITSSSVKETTTITLPALPSLTQKSLSPPPSSPPTIVTATATATIVTTTTTVTTTTTITEAPTATPNVSVADTLTTDNNSATTPTETEKTETESELKTELETELETNKLKCINANNINNNRSNCLNNNNNNNNSSINDNNINNNNNNNNNNNNNINSSSNSSHSNCNNNFNNNNNNNNSSNINDNNHSNTNNNSNSNGSGDYVPVNKITSLRSSQLDFSEVNKEKQANDSQIKIAVLSYPRYCRYRATLKRLEGLDDEWFKNSVVGALCGFSAATSDFRVMFCRDTFDYPELETHELLCNHLAPKLKGRPRGRKKKIRSESPFTGGRRTFDSDSESNDSDISIFSLGKGTCTPIQPRPHLRFNHRPLRNKVLKSEIDYKPYRKYQLKKQKDVVDTTHLLQRRTRQASISSNSNQKIGDKKRYLRANSDRKRRDEESASTSSASSSSSSSSSTISFMSSSRSSKRRSSSSMLSTPTEEKFFLRKLHEFHIKQNNIIPKVVWLSLKGVHLYSIFRQVKKLGGYNAVTENKLWKNLFGEKTDIHHMITRKRYERILLPLERSELVTKKKNEYKKHTEIMDDEKLTEDIKNEDSDEEVKVEKTEEDHVNEGDVSRVQNECKLKENMEKDQKEQKDKTSDICNEIETKLKKEKEVIEIPDDDSEKENIQEPCRMKSEKENCESDDDMPLKLPSFKMTIKKEKSPEKSEQDLSVEEMTKIQERIKSKTMTTPIPSSCEPNVNTISATSTNGKISVNSNPAASVSVPVTVIVGTPESTNKSDEVTRLRADENQQENIQQKTTTYPCTSPATNTNASSDSTSRNQKQSSSQIQIQQPHTTITVHQTTIHPQTHSNLVSSTSPSTPSQHQITNQIQITNQIQIQQITVQPNGNANGKASGEFCCNFKQDKDYQEVKIEKRDFNRDRDNNEQKNQKYNNQNNNNNNKNNSNNSNTNKTQIMRPFEKENIPFIAAGTTITPVLSTQTPLPKKSPEVIDLVDSDGESNSSSIVQPIKPQPPQRSRTRVNNHENLVTIPPVKKRKLDILREGGLEVTAISNKHGIISTAPPLSPASLRIPTNSAMNKAERYLEASKFNLPPTTSLSIPVNGSHINVPRIYAQSMYTKTEKIFGNPKDILPPNPVSNVSGEILDLTVKSPLKFPSLEIHPIPTARHVRSPPLLNKLSTNATAINLTSTRTKLPETGLQITLVPSSRSSAMTITPTPMPAVTKSLVLPPAPSQQQLQQQSQLLQPIPPQSQSQSMLQHKPPLTLTQNVHNSQNHNMKRKGVDILPIPNVPTHQKYHPVTITPTNSLQPPHQSHHQPQHQPQHQPQHQPQHQSQHQSQHQPQLQPLNQPQQYQPHLPPQHQSSHQPPHQKQQTRIDKKMNIPQPMVSVAPQVPPPPPVTVLPIPKRSSPKPAPPSVPIPIAQLPSIPTVPSSPQVPHAPIQPVPPIPVDAIDPKSPLFPFPPFISPLAAAAAAASATNQNPFLPIMNPFFFSNLYNQAMDTNHPLFMPNQQRINEFLQLYKNLPPEITNSVGFVGNGGAGGIPVPGPVPVPVGVGSSRGVGAVTGVTNGGIIPPITKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-