Vsat027794.2
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- nfxl1
- Assembly
- GCA_036346205.1
- Location
- JARFJB010000400.1:5495787-5496864[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.9 3.4e+04 -1.5 1.4 14 19 163 168 163 168 0.86 2 5 0.51 1.9e+04 -0.7 0.7 4 10 199 205 198 205 0.91 3 5 3e-08 0.0011 22.4 17.0 1 19 213 230 213 230 0.99 4 5 2.2 8.4e+04 -2.7 0.4 15 18 256 260 255 263 0.61 5 5 3.1e-07 0.012 19.2 13.8 1 19 266 284 266 284 0.94
Sequence Information
- Coding Sequence
- ATGAGTGGACGAAAGAATGTAAAACCCGCCTGGGGAAAAAATCTAACCTGGAAATCGGAGAACTCTAAATCAAATCATGATAACTTTAGTAACAAATCGGAAACTAAGTTTAAACAAATACAGGAAAAGATGCACGAGGCAGTTAAAAAACACGCAAAAGAGTGTGACTCCTCTTCGGACGAGGAGGAACTCCAAACACACTCTATTATAAacaatatctcaaaaaattacACATCATATGGGGGTACATTAGCAAATTTAGTTAAAACACAAACTTTTTTAAGTGATTCGGTAACATCTGGTGCTAAGATATGTGCAATTTGTATTTCGACAATTAAGCGAACAAATGAAgtTTGGAATTGTGAAGGGTGTTTTTCTCTTTATCACTTGACTTGTATTCAACATTGGTCAAAAAATAAAGTAGTAGAATTAAAACGATCTTTAGAAGATGCAGCTGTTATTAAAAAGACTATAAAAGTTATTTGGGATTGTCCAAAGTGTAGATATGAATATGAACCATCAGAGATACCGAGAAAGTACTTATGTTTTTGTAAAAAGGTTGAAAATCCACCGTTTCAACCATTATTAGTACCACATTCGTGTGGCGAAAGATGTCAGAAAGATTTAAAACCAATTTGTGGCCATAAGTGTCTTTTACTTTGTCATCCAGGACCCTGTCCGCCTTGTCCGCAAACTATAAAAGTTACTTGTAATTGTGGTAAAGAACAACCACAAACTCAACGTTGTAATAAGCGGGAATGGTCCTGTGGTGTACCTTGTGAGAAATTGTTCGTTTGTAAAAATCATAAATGTAGTCAAATTTGTCATCCTGGTGAATGCCAACTTTGTCCAAAGAAAAGCTTACAAAAATGTGTTTGTGGTTCTAAGACAAATTTGCGAGAGTGTTCTTCTCCTGTTTGGCAATGTGATATTGTAAGTACTCTAAtgctaaattttttatattgtgaaccgatttaa
- Protein Sequence
- MSGRKNVKPAWGKNLTWKSENSKSNHDNFSNKSETKFKQIQEKMHEAVKKHAKECDSSSDEEELQTHSIINNISKNYTSYGGTLANLVKTQTFLSDSVTSGAKICAICISTIKRTNEVWNCEGCFSLYHLTCIQHWSKNKVVELKRSLEDAAVIKKTIKVIWDCPKCRYEYEPSEIPRKYLCFCKKVENPPFQPLLVPHSCGERCQKDLKPICGHKCLLLCHPGPCPPCPQTIKVTCNCGKEQPQTQRCNKREWSCGVPCEKLFVCKNHKCSQICHPGECQLCPKKSLQKCVCGSKTNLRECSSPVWQCDIVSTLMLNFLYCEPI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -