Vsat126200.1
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- stc
- Assembly
- GCA_036346205.1
- Location
- JARFJB010001922.1:414648-436090[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 3.5 1.3e+05 -3.4 1.6 15 19 388 392 387 392 0.81 2 6 0.49 1.9e+04 -0.6 0.4 4 10 421 427 420 432 0.93 3 6 2.6e-05 0.97 13.0 16.5 3 19 435 451 423 451 0.86 4 6 0.59 2.2e+04 -0.9 1.5 5 10 476 481 476 481 0.96 5 6 5.9e-07 0.023 18.3 11.6 1 18 487 504 487 505 0.95 6 6 1.3e-08 0.00049 23.6 13.9 1 19 545 563 545 563 0.98
Sequence Information
- Coding Sequence
- ATGTCCTACTGGGACTCGAATTCTAAACGACCTTTTAACGGAGGTCAAAATAGCTATCATGAAGCTAcatataatacaaattacaacataaCAGCACCATATGTAAAGAGAAGTGGAAGTTACAATAATTATGCTCCATATAATGAAGTAAATAATGTAAGTTTACACGACAGCCGttcaaattatggtataggtGAAACGTACACTTCTATAAGCTCTGATTTTAACGCAAGTAATTTTATGCCACACACAATGCCAAATGAAAGTCCTACGAATATCTCTTTTGATAAAAATCCACAATCGTCATTAgcaattaattctaatttaacacCTTTAGCTAAAGAATTTACACCTGGTCGCAGTTACTATGAAGCAAATGGATCTAATAGTAGAAAACAAGGAGCTGTTAAAAAAGGTACATATTGGAATAAGGAACGTCATTTTTATGATACTAATAAACGTCAAAACAATGATTATACACACAGAAATCGTACCTTTTATCCAAATAATCAGAATGCTGGTAATTCTAAAGATTTTACTAAAAGTAGTGAGCAAAATAAGGTACTTCAAGatactaaaaaatttttacaacaagtGAATGTTCAAGAGAACTCAAAAAATGTTACTGATATTAGTGAAAACcagaattttatcaaaaatgttaGTAGAAATTTTAAGGAATTCGATGACTCTCGTCAACaagaacataattataattctaaGAGTAATAAATCAAGCGGATATTATAAAAACACTAACAGTAATCGTAATAGAAATTCATATAAACGAGACTATTATGATTTTGATATTAGGAATAAGGATCAAGTGTATGAAAGACGTAATCGAAATGGTGAATTCCAAAGTTTTGAGAAGAAAAGGTATGATAGTGATGTTAGTAAAGCAGAACCTTCTAAACAGAAACCGAATGAAGCTTATGGTAAAAAGGACAAGTTAGACAATCTAAAAAAGAAATTGGACGCTGCGTCACAGAGAGAACGCTTGGAACAATTGATACTTCGTCGTCTTCTAGAGTGTCTAGTTTGTTGTGAGAAACTTCGTCTGACAGATCAAATCTGGTCATGTAAGCAGTGTTatcatattttacatttaaattgcaCAATAAAATGGGCCCAATCTTCAAAATTAGAATCAGGTTGGAGATGTCCAGCTTGTCAAAATGTATATCAAGATGAACCTAAAGATTACAAGTGTTACTGCGAAAAACAAATTCAGCCTACTTTAGATCCAGGTGGTATTCCTCATAGTTGTGGATCAATTTGTGGACGTAAAGGACGAAGTTGTTTACATACTTGTACTTTAATTTGTCACCCTGGACCATGTCCGGATTGTACCGTGATGGTACCAAGATCATGTGGATGTGGTGCTACAAAACCAATTGTGAAATGTAGCTCAAGTGTTGCTGTTACATGTCAAAAGATTTGCAACAAAATTCTTAATTGTAATATTCATTATTGTACAAGTAAATGTCACGAAGGTGATTGTGAGCCTTGTGGAGAAATTTTACAACAAGAATGTTATTGTGGTAAAGAAGGACAAAAGGTTAACTGTACACAAGAAGTAAATGGAGAATTATTGTATGAATGTGGAGGAATATGTGATCAACTGTTATCATGTGGAAATCACAAATGCGAGCAGAAATGTCATAAAGGAGTATGTAACACTTGTTCTAAATCACCTAGTGAAACTGATACTTGCCCATGTGGACAAACGAAATTGGTGAATGAAAGAAAATCGTGCCTTGATCCAATCCCTTGCTGTGATAagCTACGAGGGCTATTTTTTTCAACCTTAGATGGTGCTGCTAAGGAAGTACGAAATACGCGGGAGCGTTGTGGCGCTTCCACAACCTCTGTCGTTGTCGGCTCCAAGGCGTCAGTCGTAGCGGAGGTACGGGCATGA
- Protein Sequence
- MSYWDSNSKRPFNGGQNSYHEATYNTNYNITAPYVKRSGSYNNYAPYNEVNNVSLHDSRSNYGIGETYTSISSDFNASNFMPHTMPNESPTNISFDKNPQSSLAINSNLTPLAKEFTPGRSYYEANGSNSRKQGAVKKGTYWNKERHFYDTNKRQNNDYTHRNRTFYPNNQNAGNSKDFTKSSEQNKVLQDTKKFLQQVNVQENSKNVTDISENQNFIKNVSRNFKEFDDSRQQEHNYNSKSNKSSGYYKNTNSNRNRNSYKRDYYDFDIRNKDQVYERRNRNGEFQSFEKKRYDSDVSKAEPSKQKPNEAYGKKDKLDNLKKKLDAASQRERLEQLILRRLLECLVCCEKLRLTDQIWSCKQCYHILHLNCTIKWAQSSKLESGWRCPACQNVYQDEPKDYKCYCEKQIQPTLDPGGIPHSCGSICGRKGRSCLHTCTLICHPGPCPDCTVMVPRSCGCGATKPIVKCSSSVAVTCQKICNKILNCNIHYCTSKCHEGDCEPCGEILQQECYCGKEGQKVNCTQEVNGELLYECGGICDQLLSCGNHKCEQKCHKGVCNTCSKSPSETDTCPCGQTKLVNERKSCLDPIPCCDKLRGLFFSTLDGAAKEVRNTRERCGASTTSVVVGSKASVVAEVRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -