Vsat027789.1
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- NFXL1
- Assembly
- GCA_036346205.1
- Location
- JARFJB010000400.1:5458639-5489241[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 6 2.3e+05 -4.6 2.3 5 10 26 31 26 31 0.91 2 11 9.7e-06 0.37 14.4 15.0 3 18 39 54 37 55 0.92 3 11 2.8e-10 1.1e-05 28.9 13.1 1 18 64 81 64 82 0.97 4 11 0.12 4.7e+03 1.3 3.8 9 19 275 285 273 285 0.86 5 11 0.0033 1.3e+02 6.3 5.8 1 12 294 304 294 304 0.90 6 11 5.4 2e+05 -4.0 2.7 14 18 332 336 332 337 0.85 7 11 6 2.3e+05 -4.3 1.9 10 15 355 363 354 367 0.46 8 11 0.00049 19 9.0 2.6 1 11 373 383 373 384 0.95 9 11 6 2.3e+05 -6.4 2.8 6 10 400 404 397 404 0.59 10 11 2.6e-06 0.099 16.2 18.0 3 19 413 429 412 429 0.92 11 11 6 2.3e+05 -5.1 2.3 13 19 460 467 460 467 0.64
Sequence Information
- Coding Sequence
- ATGtgtttagattttgtaaaaaagagTTGTCGTTGTGGTCTACAAACCAAAGAAGTTCAATGTAGAAAATCATTTACATGTGaaactaaatgcaaaaaattaaaagactgTCTTAAACATAATTGTAATCGTAAGTGCTGTGAGGGCGACTGCCCACCTTGTGAGAAACCATGTGGTCGGACATTAAATTGTGGTAATCATAAGTGTACTTCAGTTTGTCACAGAGGACCATGTTATCCTTGCAATTTGACTGATAGTGTTTCTTGTCGCTGTGGTGGCACCACTATTACAGTACCATGTGGTAGGAAACGAAGAACTAGACCACCAAAATGTTCATTACTATGCAAGCTTTTATTAGAATCTGACGATTTAGTAGATCCGGATTATACGGATTCAGAATTCGATGAAGAAAGTGACTCAGATGTCGATCAACTTGGTGTGTCTGGGACAGATACAGATTTGAATACCACTCCCTTGCCAACCCGTGTTAAAACAAATCAACGTGCAACAATAAGCTCGGATAAGCCTGTAACATGGACCCAAACGCCTAGCAAGTGTACGGTACCATTTACTGGGGAACAGGAGCTAAAAACACTGCCCGATGGAAATAGGCCAATAGATTACTTCAATTTATTGGCTGACGACAGATTTTTTGAACTTATTGTTCAAGAAACAAATCGCTATGCAGTTGAGCTATTCCTGTCAGAAAATTTAGGCGATGCGTCTAGAATAACACGTTGGCGTGATACTACGGTGCCTGAAATGCGTCTCTTTTTTGGGCTAATTCGACCTAATTGTCATCATGAAAAACGGGAAAATCATGCCTGTCATTTTGATTTGTGCCCGCCATGCagacaaatatgtaataaaacacTTCCATGCTCACACAAGTGCCCAGCACCGTGTCATTCTGCGGTACTATTTATGAAAGAAGGCCAAAAGGGAACGATGCCTTGGGAACAAACAAATGCACAATTAGTACATAAAGCGCTTCCATGCCCAGATTGCCTTGTTCCAATTACAATAACATGTTCAGgaaAACACGAAACAATGGAATGGCCTTGTCATATTGCAAAAGAAGGTGGTTGTGGTAGATTATGTGGTCGTATATTAAAGTGCAGCAATCACAAATGCTTTTTGCCATGCCATGTGGTTGAGAATGATAGTGATGTTATGGCTGGTACAAATTGTCTATCATGTGAGAATGAATGCCAGAAAGAGAGACCTGAAGGTTGCACACACAGATGTCCAAACCCTTGTCATCCTGGAGATTGTCCCCCATGCAAACAGATGTTACGAATTCGATGTTTGTGCGAATTAAACCAACCGTATGTTTTGTGTAGTAAATGGACGTCGGCTAGTGATAAATCTGAATTAGGAAGTTGTGGTAATCAGTGTCCTAAAAATAAAAGTTTGCAGACGTTTAGAGTGAAAACTCTAATAGATTTCGAAGAACCTCTAGAGAATATACTTGAAATGGTTGAAAACGATCTTTCGGTAAGCACTCCACTAATAGGTAGAAGGTCATTCATGTATTCGAAGAAAACAGGAATTGGAGATCTTCACGAGTATGGAGTAGGATTTGTGTTAAGCAGAAACCTGAGACAAAAGATTGTGGATTGGAAACCAGTATCggaaagaataataaaaatacgacTGCATATAGAAAATTATAAAGTAACAACAGTGCAGTGTTATGCACCTACTGAAATTGCAttatatgaagaaaaaaaaattttctatagTATCCTTAATAAAACCTTAAGAGAAATTGACCGAAAAGGTATAACAACATTAATGGAAGATTATAATGCCAGAGTGGGTTCCAACAATAAAGACATCGAGCACGTATTGGTGGGTAGAAAAAAGAAaggaatggttttaaataaaaagggGCAAATACTGACTACACTACAGCAACAGTTGGTGAAATGGAGAGAATTTTGTCAAGAAACAATGAATGTTGAAGAAGAAAGGATAGAAGTACCAACACTGTCTGCAAATACTCAACTGAATATAAATTAG
- Protein Sequence
- MCLDFVKKSCRCGLQTKEVQCRKSFTCETKCKKLKDCLKHNCNRKCCEGDCPPCEKPCGRTLNCGNHKCTSVCHRGPCYPCNLTDSVSCRCGGTTITVPCGRKRRTRPPKCSLLCKLLLESDDLVDPDYTDSEFDEESDSDVDQLGVSGTDTDLNTTPLPTRVKTNQRATISSDKPVTWTQTPSKCTVPFTGEQELKTLPDGNRPIDYFNLLADDRFFELIVQETNRYAVELFLSENLGDASRITRWRDTTVPEMRLFFGLIRPNCHHEKRENHACHFDLCPPCRQICNKTLPCSHKCPAPCHSAVLFMKEGQKGTMPWEQTNAQLVHKALPCPDCLVPITITCSGKHETMEWPCHIAKEGGCGRLCGRILKCSNHKCFLPCHVVENDSDVMAGTNCLSCENECQKERPEGCTHRCPNPCHPGDCPPCKQMLRIRCLCELNQPYVLCSKWTSASDKSELGSCGNQCPKNKSLQTFRVKTLIDFEEPLENILEMVENDLSVSTPLIGRRSFMYSKKTGIGDLHEYGVGFVLSRNLRQKIVDWKPVSERIIKIRLHIENYKVTTVQCYAPTEIALYEEKKIFYSILNKTLREIDRKGITTLMEDYNARVGSNNKDIEHVLVGRKKKGMVLNKKGQILTTLQQQLVKWREFCQETMNVEEERIEVPTLSANTQLNIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -