Vsat126197.1
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- stc
- Assembly
- GCA_036346205.1
- Location
- JARFJB010001922.1:400889-402558[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 6.1e-06 0.23 15.0 14.3 4 19 21 36 14 36 0.87 2 10 1.8 6.8e+04 -2.4 2.0 5 10 65 70 65 70 0.93 3 10 0.0021 79 6.9 7.4 1 11 76 86 76 87 0.96 4 10 1.4 5.3e+04 -2.1 0.8 4 10 91 97 90 98 0.65 5 10 1.1e-09 4.3e-05 27.0 13.6 1 19 103 121 103 121 0.98 6 10 3.2 1.2e+05 -3.2 0.7 6 10 150 154 149 154 0.83 7 10 0.00099 38 8.0 14.2 8 18 166 176 160 177 0.88 8 10 4.3 1.6e+05 -3.6 0.4 9 11 195 197 195 198 0.74 9 10 1.5e-07 0.0055 20.2 11.3 1 18 213 231 213 236 0.88 10 10 0.0076 2.9e+02 5.1 16.4 1 19 242 261 242 261 0.96
Sequence Information
- Coding Sequence
- ATGTTAGtggataaatatGTATGTTCAAAAATATTACAATGCGGACAACCCAGTGCCCCTCACAAATGTAATATGCCATGTCATGAAGGACTATGTGGCCCATGTCCAAAAACAACTATGATTCGTTGCCGTTGCGGTCATATGGATAAAGAAATTCTTTGTACGAAACTTACAACTAAAGCAGATGATGCTCGttgtgaaaaaaaatgtataaagaaaagATTATGTGGGAAGCATAAATGTAATCAATTCTGTTGCATTGAAGTTGATCATGTTTGTCCATTACCGTGTAATCGTTTGCTATCTTGTGGACAACACAAATGTGCAGAACCTTGTCATAAAGGAAGATGTTCTCCTTGCTGGCGTACAAGTTTTGAGGAATTATATTGTGAATGCGGTTCTAGTGTGTTGTATCCTCCAGTAGCATGTGGAACACGACCTCCTCCATGTGATCAAATATGTTCTAGAGTAAGAAGCTGTAGTCACGGGGCTAATCATCCCTGTCATCCAGGTCCTTGTCCACCATGTGCAATTTTAACTAAACGCTGGTGTCATGGTAAACATGAGCAACGCTCTACTATTCCATGCCATCAAAGCGATTTCAGTTGTGGGTTGCCTTGTGGAAAAGAAATGCCTTGTGGAAAGCATAAGTGTGTGCAAATTTGTCACAAAGGATCTTGTCGTACTTCATGTATCCAACCTTGTGCAGAACCTCGTAATTTATGCGGCCATCCTTGCAATTTACCTTGTCATGCTCCACCATGCCCAGAGACTCCATGTAAACAACCAGTACAAGTTACCTGTCAATGTGGACTACGCAAAGGCACTCGCATTTGCATAGATCTTTCTGCAGAGTATCAAAATATTGCGATGGCCCAACTCTCAAGTAAATTAGAGCAAATACAACAAGGAAATACAGTTGACATAACAGACCTGGTTAGTGGGCAAAAGCGGGCCACTCTTAAAATATTAGATTGCAATGAAGAGTGTCGTCTAATAGAACGTAACCGTAGGTTAGCAATAGGTTTACAAATCCGAAATCCTGATTTAAGCTCTAAATTAACACCTCGATATTCAGACTATATGCGTGCATGGGCTAAGAAGGATCCAAAATTTTGTCAATATATACATGAAAAGTTAACAGAATTAGTTCAATTAGCTAAGCAAAGTAAACAAAAGAGTAGAGCTTATTCATTTGAAACTATGAATCGTGATAAACGTCACTTTGTTCATGAATATTGCGAACATTTCGGTTGCGACAGTGCTGCTTATGATCCTGAACCAAATCGTAATGTTGTAGCAACCGCCTATAAGGATAAATCTTGGTTACCTAGTTATAGTTTATTACAAGTAATTCAAAGAGAAAGTGGACAAAGAAAAGTACCTGGACCACAGCAACTTGGAAAAGGATCTACTTCTAAAACAGAAACAGTTTCATTAAAATTACCAGGTCGTATTCCAAGAGCAGCAACACCACCTGGAGAATATGTAGATTATTTTAATAATCCTCCAGaataa
- Protein Sequence
- MLVDKYVCSKILQCGQPSAPHKCNMPCHEGLCGPCPKTTMIRCRCGHMDKEILCTKLTTKADDARCEKKCIKKRLCGKHKCNQFCCIEVDHVCPLPCNRLLSCGQHKCAEPCHKGRCSPCWRTSFEELYCECGSSVLYPPVACGTRPPPCDQICSRVRSCSHGANHPCHPGPCPPCAILTKRWCHGKHEQRSTIPCHQSDFSCGLPCGKEMPCGKHKCVQICHKGSCRTSCIQPCAEPRNLCGHPCNLPCHAPPCPETPCKQPVQVTCQCGLRKGTRICIDLSAEYQNIAMAQLSSKLEQIQQGNTVDITDLVSGQKRATLKILDCNEECRLIERNRRLAIGLQIRNPDLSSKLTPRYSDYMRAWAKKDPKFCQYIHEKLTELVQLAKQSKQKSRAYSFETMNRDKRHFVHEYCEHFGCDSAAYDPEPNRNVVATAYKDKSWLPSYSLLQVIQRESGQRKVPGPQQLGKGSTSKTETVSLKLPGRIPRAATPPGEYVDYFNNPPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -