Basic Information

Insect: Vesta saturnalis
Gene Symbol: -
Assembly: GCA_036346205.1
Location: JARFJB010002180.1:510024-511070[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0043 3.5 11.8 9.4 1 23 98 120 98 120 0.98

2 8 2.5e-06 0.002 22.0 1.1 1 23 124 147 124 147 0.95

3 8 0.86 6.8e+02 4.5 7.5 1 23 156 178 156 178 0.97

4 8 0.07 56 8.0 2.2 1 23 183 205 183 205 0.97

5 8 0.001 0.8 13.8 1.5 1 23 211 233 211 233 0.97

6 8 0.46 3.7e+02 5.4 3.4 1 23 239 261 239 261 0.93

7 8 2.8 2.3e+03 2.9 0.2 1 20 277 296 277 297 0.87

8 8 0.013 10 10.3 2.0 1 23 322 345 322 345 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0043	3.5	11.8	9.4	1	23	98	120	98	120	0.98
2	8	2.5e-06	0.002	22.0	1.1	1	23	124	147	124	147	0.95
3	8	0.86	6.8e+02	4.5	7.5	1	23	156	178	156	178	0.97
4	8	0.07	56	8.0	2.2	1	23	183	205	183	205	0.97
5	8	0.001	0.8	13.8	1.5	1	23	211	233	211	233	0.97
6	8	0.46	3.7e+02	5.4	3.4	1	23	239	261	239	261	0.93
7	8	2.8	2.3e+03	2.9	0.2	1	20	277	296	277	297	0.87
8	8	0.013	10	10.3	2.0	1	23	322	345	322	345	0.93

Sequence Information

Coding Sequence: ATGgaagattttaataataaaggCTGTGATACCGACTCTGGCAAGAATACAAGGTTAAAGGTTATTCAAGATGAATTTTTAGGTTTTGATAAAATTGATGTTGATTGTACCGTTTGCAAAAGTAGATTTAATATTGAACAAGTTAATGAATGGAAAAATACACGTAGGAAGGAAGAACTAATTGCTGCAATATCGCTCATTGAGCTACAAAATATTAAGCGATCTGATTCACCAATAGTACCTCTAAATGAATCAGTTGAAAATAATGtacaacagcaaaaaaaaaattgttaccactGTAACCATTGTgattataaagtaaataagaaacATCATTTAGAACAACATCTACGTGCTCACTTAAAACCTTATTTGTGCACTGTTTGTAGTAAAGTCTTCTCCAGTTTAAGAACACTACAACGACATATGGAAAAGATGCATGATAATCACAAAGGTAAAAAGTTATTTCAATGTTGtttatgtgattataaaacaacgTTTGTAAAAAAACTCCAGCGTCATAATTGTGTACAtggaaaagaaatatttaagtgTCTGAAATGCAGTTGTATAACATTAACGAAAGCTTCATTAGACCGTCATATACGTATACATGACAGTCCAAAACTGCATGAATGCAACGAGTGTGGGTATATAACAACAATTAAAGATGAAATGAATTCACATATGCACATTCACGGAGGAAAGAAGATTTTTAAGTGTGAGCTATGTTCTTTTCAGACATCACATCGAGGATATTTTGTAGCACATAAAGATTTTCATTCTTCTTACCCTCTAAAGAAAGAGAATCCTGATTCAAAAACGAAATTTATGTGTAGCGGTTGTAGTTTCGTTACTCTATTACGTTCTTCACTTTTGAAACATGTTAAATGTTGTGGACATCAATTATCACGGCAAACTTGGGAGCTTTTGAATTTTTGTGATAGTGGAATGGATAAAAAATTTCATTGCCCTTACTGTGGATATTTTTCTTTTAGTTTCGAAAAGTTAAAAAATCATGCTATTTCAGTTCATTGTAAAgaataa
Protein Sequence: MEDFNNKGCDTDSGKNTRLKVIQDEFLGFDKIDVDCTVCKSRFNIEQVNEWKNTRRKEELIAAISLIELQNIKRSDSPIVPLNESVENNVQQQKKNCYHCNHCDYKVNKKHHLEQHLRAHLKPYLCTVCSKVFSSLRTLQRHMEKMHDNHKGKKLFQCCLCDYKTTFVKKLQRHNCVHGKEIFKCLKCSCITLTKASLDRHIRIHDSPKLHECNECGYITTIKDEMNSHMHIHGGKKIFKCELCSFQTSHRGYFVAHKDFHSSYPLKKENPDSKTKFMCSGCSFVTLLRSSLLKHVKCCGHQLSRQTWELLNFCDSGMDKKFHCPYCGYFSFSFEKLKNHAISVHCKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -