Vsat004622.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Vesta saturnalis
Gene Symbol
RREB1
Assembly
GCA_036346205.1
Location
JARFJB010000036.1:7301000-7305835[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0026 2 12.5 1.2 1 23 62 84 62 84 0.96
2 16 0.00023 0.18 15.8 0.4 1 23 97 119 97 119 0.98
3 16 3.9e-05 0.031 18.2 3.6 1 23 125 147 125 147 0.99
4 16 5 4e+03 2.1 0.1 1 23 218 242 218 242 0.78
5 16 0.00057 0.45 14.5 2.3 2 23 248 270 248 270 0.97
6 16 0.11 84 7.4 2.1 1 20 318 337 318 339 0.94
7 16 0.055 44 8.3 0.2 1 23 468 490 468 490 0.97
8 16 8.3e-06 0.0066 20.3 0.8 1 23 499 521 499 521 0.99
9 16 0.00084 0.67 14.0 3.1 1 23 527 550 527 550 0.97
10 16 0.0003 0.24 15.4 1.4 1 23 967 990 967 990 0.96
11 16 0.0011 0.9 13.6 0.4 2 23 1220 1241 1219 1241 0.97
12 16 0.13 1e+02 7.1 6.3 1 23 1247 1270 1247 1270 0.97
13 16 0.43 3.5e+02 5.5 4.4 1 20 1298 1318 1298 1322 0.93
14 16 0.071 57 7.9 1.3 1 23 1385 1408 1385 1408 0.96
15 16 0.017 14 9.9 0.4 3 23 1456 1476 1454 1476 0.93
16 16 0.0075 6 11.0 7.8 1 23 1482 1504 1482 1504 0.98

Sequence Information

Coding Sequence
ATGGATTTAGTGTCAGAGCTAGATTCATCAATTAGAGAATACACAAAAAACCAAAGCAATCAGAGTGATTCGGGTATATTATCGGGTACTGGAAATTCAACAGCAATCGATATGAATCGTACAATCCATTCAGAAAACGAAGATACAGATAACCGAAGCAATAGCAATTCGCCAGATCGACAATATTTGTGTACAATTTGCGAAATCATGCTTACATCCCAACATGAATTTACTATGCATATCAGATCTCACAATAATGAAACGGAAGTACGGGATTCAGAAAAAGGCTTCACATGTCGTATTTGTTTTAAAGTACTCAGTTCCAACGCAAGTTTAGATAGACATATGTTAATACATAGTGGAGAGAGACCTTTTACATGCCAAGACTGTGGGGATACGTTTACGACGAACGGAAATATGCACCGACATAGACGAACCCAcaataataaaagtgaaaattacgAATCTGATGGTAGTACTGATAGTGGTGGTAGCAATAGTCCAAAAATCGagtacaacaataataaaatatttactaaaacagaTAATTTTAACGATAGTAAACGAAAATGTTCGAATCTCGATTACGACGAACCTTACAAACGAGCTaggattaaattagaaaatacttACAGCAACGATGTACACGCTTTTAGCTGTCCTGTATGTGAGCGTAACGACTTTAATTCAATAGACATGCTACAAATTCACCTTGAAGATAATCACCCTGATTATCcagcaaaatgtaataaatgcagtcaaacgtttaaaaataacaaacttcTCAACGAACATAAAATTACGGTTCATGTAAGCGAAGAAAAAGCtcaaaaaaattctgtagttGGTTTTAAAGATTTAACTTTTGTCGATTTTTCAAGTCAGAAGTTTCCGTACATAGCAAAGTACGAATGTGAGAAGAATTTACATAAAGTAGCTGGAGGTTTAAAATTTCAATGCAGCAAGTGTTCACGAGCATTTCCGTGCGCTAGTTCTCTTCAAATACATCACTCAAATTGCGTAGTTGGCTTGGATCTTTCTAAAAAAGACGGtactaacaataaaataaatcatatagataatGATTTACGACGCAACGATTTCTTCGCTAGACTCGATTTACAGGATAATTCTACTACTAAAAATGAAGCAGTTGAAAAAGTAACTAAAGCTTCTACAAGTACATTACCTACCGATAGTAAAGATTTGGCCGATATTCAGACAATAATTTCCATGACGACTAACGGCACGTTACTGCAGCAGCTTCAAACGAAACCTAATGATCTCCACACTTCTTTACGTCCTTACAACGAAAACGAAGAATCCCATAAGCATGAAAACGAAGAAGAATCACAAGATTTTTTTGCAGCAGAATTTAGAAAGATGAAAGTTCGCGGAGAATTTCCATGCCGATTGTGCACAGCAGTTTTTCCGAATTTACGAGCTTTAAAAGGACATAATCGACAACACTTAAGCGGAAATAATAATGGCACTTACAGATGCAATATGTGTCCTCATTCCTCTATTGATAAAGCCGCTCTAATCCGTCACATGAGAACCCATAACGGAGATCGACCTTACGAATGTTCTTTGTGCAATTACGCATTCACCACAAAGGCTAACTGTGAACGGCATCTTCGAAATAGACACGCAAAAACTACTCGTGAAGAAGTTAAAAAATCAATCATTTATCATCCGTCAGAAGATCCTAGCAACGAAGAAATATCGAAAATGTTAGCTCGTGAAGATAAATTAAATGTACCTTTAAAAGAATTAAATGATAGTGCACCAGAAACTGTAAAAATTACGTCTAATGACAATTATTTACCCACACCCGATCTTCCCAATTTACTCCCCGAAAAACTAATTTCCGACTGCCATTCAATCCCTCAAAACATAATGAATTTACAAGGCAACTCGtcttttaaactaaataatcACCACCCGCTCAACCGAATTGAAATAACAGATTTGAAATACAACGATCTTGGTAGTCAAATTGTTGAACGAAATACACCTACAGACGAACATACGCCAGCTTATGGACAACAATTTAACTTCTCTCCAAAAATTATAAACACTTCAACTCCACATAAACAACCTTTAAAGATTAAAAGTTTAGAAGATTTACAAAACAACGATTACCATAGTGCTAAGAATTTTGTTAAGGATGAAGTAGATGATTTTGAAGTAGACGTAGAAGATGATCCTACAGATATGGCTTTAGATTTAAGTACAAAAAAGATCGAAAATAAACCGATAGAAGATAAACCAGATTTAGAAGACTTACCTCAGGATTTATCCAAAAAGCACGTGGAGCAACCTGCACATATGAGTGAAATTTTAGCCAGacagttattaaaaaatacaCCTAAAATTGATCCAGCGGGATTATACGCATCTCAACTCGCATTTTACCGTAATGGTTTTAGTGGACTTCACGGATTACACACGTGGCCATTTTCTTTAAACCCCTTATTTTTCCAATCAATTCCAAATCCCATGTTACATCAAGAAGCTCAAGATATGAAAGAACGGTTGCAAAGACTGCAATTATGTGGAGGTGGTATGGTAATGGACAATTTTACAGAAAGATTGAAAAACTTTCAACCGTTAGCTAATCCTGCTTTAAACTcgttcaattataaaataaacgaCATTAAACCCGAAATTAGTTCGCATGAGCCAAATTTTCAGACTGGAAGTAAATCTGAAGAAATGAAACCTCTCAGTCTTTCTGTCGAACCAAGTTTATCtgataatttaatgaaaatgcaAAGCCCTTTGCCGACTTCAAAGCCAGACCAATTAAGTTCGCCAAGTTCTGTAAAAATGGTTATAAAAAATGGAGTCTTAATGCCTAAACAAAAGCAGAGGCGGTACCGCACTGAACGACCATTTTCTTGTGAATATTGTTCCGCACGGTTTACTTTAAGGTCTAATATGGAACGTCACATTAAGCAACAGCATCCTCAGTATTGGTCCCAGCGCCAAAGAACAAATATTGGAACTGGCGCTCGCAAATCCAGTAATGGAAATCAtcgaaatagttttagtaatttaaacattccaaactACGAAACTCAAATTAAGTCTGATTTTGATGACATCAAAGATAATCACTTATCCGATAAAATTAAATACGTTATATTGGCACAGCATTTAAAAGCGGCTCAAAATTATAAGGCATCGAATAAACACCATAAAGCAAACGAAGAAGAAGAGGATTATCCGTTAATTATAGATGAAAAAGAGGAGAATagcaaaagtgaaaatttttcacTTCCAAAGGGTAAAGCCGTTTCTTATGGTAATATGCAAAATTATAATGATAAACGGTCTCCCAACCAAGATGAAAATCCTGAAAAAGTTCAAAGcgcaaatattaataaaaatgaagatgCTCAAGATTTGGTGTCTGTATCTCGCCTATTGGATAATGCTTCCCAGCAACCGTTTAAAGAATATTTCCGAAGGGAAACAGAAGGACGAGAAGGAATTGCTAGTGAAGAAGACGAAGAAGGGTTGGTGGCAAGCAGCAGTACGAGCGATGGCAATAACTCTGGAACTGACGAAAATAGgtCTGAGTATGAAAATACAGCAAGCCAAATACCGGCTAAGAAAAAATCCGCTTACTCTTTGGCACCAAACCGAGTAAGTTGTCCGTATTGTCAACGTAAATTTCCGTGGACATCGTCTCTGCGAAGACACGTGCTAACACATACTGGACAAAAGCCGTTTAAATGTAGCCATTGTCCACTTTTGTTCACGACTAAGTCAAATTGTGACCGTCATTTACTCCGTAAACACGGAAATTCTGCGAGTGCCATCAATAACGAGTCCTCTAACACTAATAGCAACTATATGATGCGAAATGTGCCTGAACGTCCATTCAAGTGTTCCAGCTGCCCGAGCAGCACGTTTTCTACTTACTCGAATTTAAAAAAGCACATAAGCTGTAAGCACTCTTTTCAAAATATACCAAGTGACGATGCACGTTCTCAAATATCAACAGGTTATGAAGCTGGTAGTTCTGAAGATGAGAAAATGCCGTTAGCCGAGCCAAAAAGTGATTGGGATAAACAAATTACACCTCACAACAAATCAGGGGCAGAAATCCCTAACTGTCATTTACAAAATTCGGAGTTACCCTTTAAGTGTCATCTATGCGACAATTCATTTGGTGAGAGAAATGATGCTTTGGACCATATGAAGGAGAGGCACCGATCGGAATACGAACTGTTACTATCGAAAAACGCTCTAGATGTTAGTGCAACAACGCCTGATGAAAATCCCAATCACGATGACAACGATGATAATGAGGTGCGAGGAAAATTTCCCGATTATGCCAATCGAAAGGTAATATGTGCTTTCTGTATGCGACGATTTTGGTCAGCGGAAGATTTGCGACGTCACATGCGAACTCACACAGGAGAACGTCCGTTTAGTTGCGACATCTGTCACCGTAGATTTACTTTAAAACACAGTATGTTGCGACATCGTAAGAAGCACAACGTGGCGTTTGAAATTGATAATGTAAACAGCGATGAAGACGCTAACATGCATTCCGTACCATCTTTTAATAAGTTTGTTAAAGGTAACAACAATAACTTGGTAAGTAAGGCCATAGACAAAACTGATGAATCTGATGGTGCAGAAGGTAGTGATTTGATTAGTAATTTATTAGGTATTAGAGATCGTTCTATTATTGATCAAGTTTTAACTTCTTCTGCCGATGATGCGGCTAAATTGTTAGGTGTTAAGGGTGGTGAGCAAGAGTAG
Protein Sequence
MDLVSELDSSIREYTKNQSNQSDSGILSGTGNSTAIDMNRTIHSENEDTDNRSNSNSPDRQYLCTICEIMLTSQHEFTMHIRSHNNETEVRDSEKGFTCRICFKVLSSNASLDRHMLIHSGERPFTCQDCGDTFTTNGNMHRHRRTHNNKSENYESDGSTDSGGSNSPKIEYNNNKIFTKTDNFNDSKRKCSNLDYDEPYKRARIKLENTYSNDVHAFSCPVCERNDFNSIDMLQIHLEDNHPDYPAKCNKCSQTFKNNKLLNEHKITVHVSEEKAQKNSVVGFKDLTFVDFSSQKFPYIAKYECEKNLHKVAGGLKFQCSKCSRAFPCASSLQIHHSNCVVGLDLSKKDGTNNKINHIDNDLRRNDFFARLDLQDNSTTKNEAVEKVTKASTSTLPTDSKDLADIQTIISMTTNGTLLQQLQTKPNDLHTSLRPYNENEESHKHENEEESQDFFAAEFRKMKVRGEFPCRLCTAVFPNLRALKGHNRQHLSGNNNGTYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKSIIYHPSEDPSNEEISKMLAREDKLNVPLKELNDSAPETVKITSNDNYLPTPDLPNLLPEKLISDCHSIPQNIMNLQGNSSFKLNNHHPLNRIEITDLKYNDLGSQIVERNTPTDEHTPAYGQQFNFSPKIINTSTPHKQPLKIKSLEDLQNNDYHSAKNFVKDEVDDFEVDVEDDPTDMALDLSTKKIENKPIEDKPDLEDLPQDLSKKHVEQPAHMSEILARQLLKNTPKIDPAGLYASQLAFYRNGFSGLHGLHTWPFSLNPLFFQSIPNPMLHQEAQDMKERLQRLQLCGGGMVMDNFTERLKNFQPLANPALNSFNYKINDIKPEISSHEPNFQTGSKSEEMKPLSLSVEPSLSDNLMKMQSPLPTSKPDQLSSPSSVKMVIKNGVLMPKQKQRRYRTERPFSCEYCSARFTLRSNMERHIKQQHPQYWSQRQRTNIGTGARKSSNGNHRNSFSNLNIPNYETQIKSDFDDIKDNHLSDKIKYVILAQHLKAAQNYKASNKHHKANEEEEDYPLIIDEKEENSKSENFSLPKGKAVSYGNMQNYNDKRSPNQDENPEKVQSANINKNEDAQDLVSVSRLLDNASQQPFKEYFRRETEGREGIASEEDEEGLVASSSTSDGNNSGTDENRSEYENTASQIPAKKKSAYSLAPNRVSCPYCQRKFPWTSSLRRHVLTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSASAINNESSNTNSNYMMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHSFQNIPSDDARSQISTGYEAGSSEDEKMPLAEPKSDWDKQITPHNKSGAEIPNCHLQNSELPFKCHLCDNSFGERNDALDHMKERHRSEYELLLSKNALDVSATTPDENPNHDDNDDNEVRGKFPDYANRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICHRRFTLKHSMLRHRKKHNVAFEIDNVNSDEDANMHSVPSFNKFVKGNNNNLVSKAIDKTDESDGAEGSDLISNLLGIRDRSIIDQVLTSSADDAAKLLGVKGGEQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-