Basic Information

Insect: Vesta saturnalis
Gene Symbol: X-element\ORF2
Assembly: GCA_036346205.1
Location: JARFJB010000069.1:2370638-2396028[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 6.8e-05 0.055 17.4 0.6 1 23 173 195 173 195 0.98

2 10 0.0015 1.2 13.2 1.6 1 23 201 223 201 223 0.97

3 10 2.3e-05 0.019 18.9 3.1 1 23 229 251 229 251 0.98

4 10 0.00019 0.15 16.0 1.4 3 23 265 285 263 285 0.95

5 10 0.00033 0.27 15.3 0.7 2 23 292 313 291 313 0.97

6 10 5.7e-07 0.00045 24.0 1.8 1 23 319 341 319 341 0.99

7 10 9e-06 0.0072 20.2 0.2 1 23 347 369 347 369 0.96

8 10 8.9e-06 0.0071 20.2 0.1 1 23 375 397 375 397 0.98

9 10 1.1e-06 0.00088 23.1 2.3 1 23 403 425 403 425 0.98

10 10 4.1e-06 0.0033 21.3 2.8 1 23 431 453 431 453 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	6.8e-05	0.055	17.4	0.6	1	23	173	195	173	195	0.98
2	10	0.0015	1.2	13.2	1.6	1	23	201	223	201	223	0.97
3	10	2.3e-05	0.019	18.9	3.1	1	23	229	251	229	251	0.98
4	10	0.00019	0.15	16.0	1.4	3	23	265	285	263	285	0.95
5	10	0.00033	0.27	15.3	0.7	2	23	292	313	291	313	0.97
6	10	5.7e-07	0.00045	24.0	1.8	1	23	319	341	319	341	0.99
7	10	9e-06	0.0072	20.2	0.2	1	23	347	369	347	369	0.96
8	10	8.9e-06	0.0071	20.2	0.1	1	23	375	397	375	397	0.98
9	10	1.1e-06	0.00088	23.1	2.3	1	23	403	425	403	425	0.98
10	10	4.1e-06	0.0033	21.3	2.8	1	23	431	453	431	453	0.97

Sequence Information

Coding Sequence: ATggatttaagtatttatttaacagcACCATTACAGCTGCACAAGATTTGTAGGGCATGTTTAAGTGCAAAAGGAGATATGAGACCATTGTTTGGGGCTTGTTTAGATGAAATGTTGGTTTCCTTTGCTTCTATTCAGGTCCAGGAAAATGATGGGTTACCTAATCTGATGTGTGTTCAATGTGTGCTACAATGCAGTAGAGCTTATACTTTCAAACAACAATGTGAAAAGTCAGAAAATATTTTGAGGCAGTACATCAGTGCTGAATTTCAGgaTCAACTTGCAAAATCTTTACTGGAGCAACAAACTAAAGTGGAACTAGAAGAACAACTTACTTTTGTAGAACCAGCTGAAACCGCAATTGCTGAAGAAATTCCAGCGGAATTGGTTAATGTGAGTTACACTGAAGATGGAAACTACAAAATTGAAGTTAAGGGGGAAATTTATGTGGCTGAAGAGCCTGAGGTTATAGTACCGGAATTACCTTGCATAGAAGAAAAATCTATGAAACTAAAATATCCTTGCTGTAAATGTGATGCATCCTTTCCTTTAAAAGTTGATTTAAAGGTACACATGATGAGCCACCCAAAAGAATTAGATCATGTTTGTCATGTGTGCAATAAAGGTTTTCCTGAAGCTCGTATCTTAAAACGTCATCTTAAAATTCATCTCGATAAGAAACCCCATCAGTGTGATCAATGTGACATGTCTTTTGCTGAAAGTTCAAATTTGAGTAAACACAAAAAGAAACATACAGGGGAATTGCGAAATATTAAAGGAAAACCACATTTGTGTTCTGTTTGTGGGAGGGCATTTAAATGGGCATCTAGCTTATCAAAACATATGAAATATCATACAGGACATAAGTTGCTTACTTGCAAATATTGCAGCAAGCAATATGTTGAAGCACGAAGTTTACGCATTCATGTGAGATCCCATACTGGAGAAAGGCCTTATGTTTGTGATATTTGTCAAAAAAGTTTTACACAAATTTGTAACCTTGAAAAGCACTTACGAGTGCACACAGGAGAAAAACCGTTTTTGTGTCCTACATGTGGAAAAGGttttacacAGTCTGGATATGTTGGTATACATATGCGAACACATACAGGTGAACGACCATACATATGTACAACTTGTGGAAAAGCTTTTGCCGGTTCTAATACATTAGCAATACATCAACGTATTCATACCGGTGAAAAACCGTACAGTTGTAACTTGTGCGGAAAATCTTTTAGTAGACATGAAACACTTGTAATACACACTAGATCCCATACTGGTCATAAACCACATATCTGTTCGGTATGCAATAAAGGATTTACTTCGTCTGGTCATttgtctgggcacatgagaactcACACTGGTGAAAAACCACATGGTTGTGGAATTTGTGGAAAAAGTAAAGCGTTTGATACTGTTAATCATACAATACTCCTACAAAAACTGAATCATTATGGTGTTAGAGGAGTTACATATAATTTAATAGAATCATATCTACGAAATAGACAAGTTTACACTCAACTAACATTATTAGATGGAACTACTGTAAAATCATCTACCAATACTTTAGATCTTGGGGTCCCACAAGGATCAATTTTAGgtccactcctttttttaatctATATTAATGATTTACCGCCATTTATATCATCTGCCTGcagtttaatgtatgcagatgatgTGAATTTTATTGTTACCGGAACAACTGTATCAGAATTACTTAGTACCATTGATAAAACTATAAAGGATGTAAAAGAATGGAGTCACattaataatatacaattaaACTTGAGCAAGACATGctacattgtttttaataatgttgATTGTGAACAGTCAATTGGAGAAATCAGGAAAGTTACCACTATCACAACTCTTGGAGTTAAGGTTGATCAAGCCCTTACATGGGAAGTACATGTACTTAACACACATAAACGTCTAGTTAAGGCAAATTTTGCTTTACGAAAATTAATCTCAGTAATGTCTCTTGACTGTCTACTATATGTCTATCATGCATATTTCCACAGTATTCTAAGatcaaaaaACACCTGTAAGAATAATATCAAAATCTACCAGAAGGAAATCGTGCAAGTATTATTTCAGTAA
Protein Sequence: MDLSIYLTAPLQLHKICRACLSAKGDMRPLFGACLDEMLVSFASIQVQENDGLPNLMCVQCVLQCSRAYTFKQQCEKSENILRQYISAEFQDQLAKSLLEQQTKVELEEQLTFVEPAETAIAEEIPAELVNVSYTEDGNYKIEVKGEIYVAEEPEVIVPELPCIEEKSMKLKYPCCKCDASFPLKVDLKVHMMSHPKELDHVCHVCNKGFPEARILKRHLKIHLDKKPHQCDQCDMSFAESSNLSKHKKKHTGELRNIKGKPHLCSVCGRAFKWASSLSKHMKYHTGHKLLTCKYCSKQYVEARSLRIHVRSHTGERPYVCDICQKSFTQICNLEKHLRVHTGEKPFLCPTCGKGFTQSGYVGIHMRTHTGERPYICTTCGKAFAGSNTLAIHQRIHTGEKPYSCNLCGKSFSRHETLVIHTRSHTGHKPHICSVCNKGFTSSGHLSGHMRTHTGEKPHGCGICGKSKAFDTVNHTILLQKLNHYGVRGVTYNLIESYLRNRQVYTQLTLLDGTTVKSSTNTLDLGVPQGSILGPLLFLIYINDLPPFISSACSLMYADDVNFIVTGTTVSELLSTIDKTIKDVKEWSHINNIQLNLSKTCYIVFNNVDCEQSIGEIRKVTTITTLGVKVDQALTWEVHVLNTHKRLVKANFALRKLISVMSLDCLLYVYHAYFHSILRSKNTCKNNIKIYQKEIVQVLFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -