Basic Information

Insect: Vesta saturnalis
Gene Symbol: -
Assembly: GCA_036346205.1
Location: JARFJB010002276.1:7865643-7867838[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.5e-06 0.002 22.0 1.7 1 23 204 226 204 226 0.98

2 9 2.4e-08 1.9e-05 28.3 1.6 3 23 234 254 232 254 0.98

3 9 0.00018 0.15 16.1 0.4 1 23 260 282 260 282 0.98

4 9 1.4e-06 0.0011 22.7 1.1 1 23 288 310 288 310 0.99

5 9 1.8e-05 0.014 19.3 1.7 2 23 425 446 424 446 0.96

6 9 2.3e-09 1.8e-06 31.5 1.6 1 23 452 474 452 474 0.98

7 9 0.00052 0.42 14.7 0.6 3 23 482 502 480 502 0.97

8 9 7.7e-05 0.062 17.3 0.9 1 23 508 530 508 530 0.99

9 9 0.016 12 10.0 0.8 1 23 536 560 536 560 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.5e-06	0.002	22.0	1.7	1	23	204	226	204	226	0.98
2	9	2.4e-08	1.9e-05	28.3	1.6	3	23	234	254	232	254	0.98
3	9	0.00018	0.15	16.1	0.4	1	23	260	282	260	282	0.98
4	9	1.4e-06	0.0011	22.7	1.1	1	23	288	310	288	310	0.99
5	9	1.8e-05	0.014	19.3	1.7	2	23	425	446	424	446	0.96
6	9	2.3e-09	1.8e-06	31.5	1.6	1	23	452	474	452	474	0.98
7	9	0.00052	0.42	14.7	0.6	3	23	482	502	480	502	0.97
8	9	7.7e-05	0.062	17.3	0.9	1	23	508	530	508	530	0.99
9	9	0.016	12	10.0	0.8	1	23	536	560	536	560	0.95

Sequence Information

Coding Sequence: ATGGATCGTGCGCAATCACAGTGGGGATTACACGATAATTATGGAGCCCCACAACAAACATCGTCTGGTGCTGCAAGTCCTCAACAAGCATGTGGACCGACAGTACCTTTGGGTGTTGAAGCAGATTCTGTACCACCACGTGACCAAAGTTTACCATCACCTGCACCTTCGCCGTATCCAGCAACACAAGCTGAACCTCGTGAAGATGATATACAACAGGAACCGCCTTCAATGGATTTGGAACCAAGACCATCGTCACAATGCTTTGCGGCTGATCTCCAACAGCAACAGCAACCACCACCTCCACCACAACAGCAACCACAACAATCAGCATATCATCAATATTCACGAATACCACCACCTGCTGCTCCACCGCCCGTACCCCCACACATGCTAGGTGCGGGTAGTTTCTCCGCTCTGCATTATTTAAAACAGCCCGGAGTTATGTTAACATCTTTGGGGCAGGATAATAATGGACCGGTTGATCAATACACAAGCAGTATGCAAGATTTACGTTCTGCTAGTCTACCGGATGTAATACAACAGCAACAGCAGCATCAAGTTGGGATGAAACAACATAAGAATAATCTTGGCGGTGAGCTACGACTCTTCAAGTGCCTAACTTGTGGAAAGGATTTTAAACAGAAATCGACCCTCTTACAACACGAACGAATACATACTGATAGCAGACCGTACGGATGTCCAGAATGTGGAAAACGTTTCCGTCAACAGTCCCATCTCACTCAACATCTTCGTATCCATGCCAACGAGAAGCCCTACGCTTGTGTGTACTGCGAACGCACATTTCGACAGAGAGCAATCCTCAATCAGCATCTGCGCATCCACTCCGGTGAGAAGCCATATGAATGCCCAGAGTGCGGGAAGCATTTCCGCCAGAAGGCCATCCTCAATCAGCACGTCCGCACACACCAAGaCGTAAGCCCACATCTGGtgtttaaaaatggtttaaatccAACATTATGGCCTCAAGATGTCCCTTTTCCTCCAGATGAAGGTAAAGAAGAGGTGACGTCAACATACGGTGACGGAGATGCAGTAACACAACAAGAGCGATCAAATTGTTTCTCACCGGGAAGTATAGCGGGTAATTTACAATATCCCGCTTACTTTAAAGATGCCAAAGGTATAAATCACTCTCTATTTGGAGCCGCAGCAAATTTTGGAGCTCTCCAATACCTCAAACAAGGACAAGCAGGTAAATTACCAGACGTTATACAACACGGTAGATCAGCAGGTATGCCTTTATATGTACGCTGTCCAATTTGTCAAAAGGAATTCAAGCAAAAATCGACACTCCTGCAACATGGTTGTATACACATCGAATCAAGACCTTATCCATGTCCAGAATGTGGTAAAAGATTTAGGCAGCAATCACATTTAACACAACACCTACGAATTCATACCAACGAAAAACCTTACGGATGTGTATATTGCGGTCGAAACTTTCGACAACGAAcaattttaaatcaacatttacGGATACATACAGGGGAGAAGCCTTATAAATGTGGACAATGTGGAAAAGATTTTAGGCAGAAAGCAATACTTGATCAGCATACACGTACTCATCAGGGAGATAGACCATTTTGCTGTCCTATGCCAAACTGTAGGCGGCGTTTCGCAACCGAACCTGAGGTTAAGAAACATATAGATAATCATATGAATCCACATGCCGCAAAAACACGAAGAAATTCGACCAGTTCAGATAATAGTAAACAAACGCCTAATGGACTATTGCCTAGAGGATTAACCCCTACGACAGTTGTAAAACCCGAGCTCTATTTTCCACAGTGTTACGCACCGAGTTTTAATCCCCCAGGTAGCGTAACACAATTTCAGGGTCCAACCTCTGAATATAAGACATCAAATGGATTGCCGGCTCAGTGA
Protein Sequence: MDRAQSQWGLHDNYGAPQQTSSGAASPQQACGPTVPLGVEADSVPPRDQSLPSPAPSPYPATQAEPREDDIQQEPPSMDLEPRPSSQCFAADLQQQQQPPPPPQQQPQQSAYHQYSRIPPPAAPPPVPPHMLGAGSFSALHYLKQPGVMLTSLGQDNNGPVDQYTSSMQDLRSASLPDVIQQQQQHQVGMKQHKNNLGGELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCERTFRQRAILNQHLRIHSGEKPYECPECGKHFRQKAILNQHVRTHQDVSPHLVFKNGLNPTLWPQDVPFPPDEGKEEVTSTYGDGDAVTQQERSNCFSPGSIAGNLQYPAYFKDAKGINHSLFGAAANFGALQYLKQGQAGKLPDVIQHGRSAGMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCGRNFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKTRRNSTSSDNSKQTPNGLLPRGLTPTTVVKPELYFPQCYAPSFNPPGSVTQFQGPTSEYKTSNGLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01330021;
90% Identity: iTF_00153828;
80% Identity: -