Basic Information

Insect: Vesta saturnalis
Gene Symbol: -
Assembly: GCA_036346205.1
Location: JARFJB010002216.1:254077-255078[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00026 0.21 15.6 0.5 2 23 45 67 44 67 0.94

2 10 7.9e-05 0.063 17.2 4.4 1 23 73 95 73 95 0.97

3 10 0.014 11 10.2 2.2 2 23 102 124 101 124 0.96

4 10 7e-06 0.0056 20.6 1.6 1 23 130 153 130 153 0.98

5 10 4.4e-07 0.00035 24.3 2.2 1 23 158 180 158 180 0.99

6 10 2.4e-07 0.00019 25.2 1.2 1 23 189 211 189 211 0.97

7 10 0.0001 0.083 16.9 0.7 1 23 217 239 217 239 0.98

8 10 1.7e-05 0.014 19.3 2.2 1 23 245 267 245 267 0.98

9 10 2.6e-07 0.00021 25.1 3.6 1 23 273 295 273 295 0.98

10 10 2.2e-06 0.0017 22.1 0.2 1 23 301 323 301 323 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00026	0.21	15.6	0.5	2	23	45	67	44	67	0.94
2	10	7.9e-05	0.063	17.2	4.4	1	23	73	95	73	95	0.97
3	10	0.014	11	10.2	2.2	2	23	102	124	101	124	0.96
4	10	7e-06	0.0056	20.6	1.6	1	23	130	153	130	153	0.98
5	10	4.4e-07	0.00035	24.3	2.2	1	23	158	180	158	180	0.99
6	10	2.4e-07	0.00019	25.2	1.2	1	23	189	211	189	211	0.97
7	10	0.0001	0.083	16.9	0.7	1	23	217	239	217	239	0.98
8	10	1.7e-05	0.014	19.3	2.2	1	23	245	267	245	267	0.98
9	10	2.6e-07	0.00021	25.1	3.6	1	23	273	295	273	295	0.98
10	10	2.2e-06	0.0017	22.1	0.2	1	23	301	323	301	323	0.98

Sequence Information

Coding Sequence: atgGTTTGGCAATATTACAAAGTGCTTAACGTACCACTAAAAGATGATGACAACGGAGAAGAAACAAAGATTTTTGACTCACCTCTAGATTTTGACTCAATTATAATCGAAAACGATGCTGCCTTGGATTTAATTTGCActgaatgcaataaatatttcgAAACTCGCAGAAGATTATTACGACACATATATGTCGTGCACAATAAAAAGGCAATTCATCCATGTAATTTATGTGGTAAAATGTTTAAAAGTTTGTGCTACCTAAAATTACATGAAAACACTCATAAATTTGGGACCGAGTTAAAATGTGAGATCTGCAGTATATTGTGTAAGTCGAAACAAACGTTAATCGCTCATAAGAAACGTATGCATAGTAACAGCAGTAGATTTGAGTGTGACTCAtgtaataaagaattttattctAAAGCTGATTTGAGAAGTCACTATAGAAAATTACATTTAGGAATAACTTTTAAGTGTCCAGACTGTGACAAGATTTATACAGATGAAAGCTATTTCAAATACCACCGACGAACTCATCAACCTGGTTATGTACCAACTATATATAATTGCTTGGAATGTGATGCAAAATTTTCAACAAAGCAAAATTTAAGGAGACATATGAGAGGACATACgttagataataatttcatatgtGATGTGTGCGGTAAACGACTTTCAAGTATGAAGGGTTTCCAGACCCATAGAAGAATTCATACTGGAGAAAAACCGTATAAGTGTGACTATTGTGATAAACATTTTGCTTCCAAAGATGTTTTATCGCAGCACAAGCTGATACATACAAAGGAAAAACGTCATACTTGTGATGTGTGTTCAAAACGATTCTCACAACGTAGTTCGCTTAGGATTCATCTACGCACACATACTGGAGAATGTCCTTatgtttgtaatatttgtaatgaaTCATTCAGAGTTAAAGTGGCGTTGATGTCACAtttaaaagttcataatgtaTGTTATGAACCTACCAATGTTATGTAG
Protein Sequence: MVWQYYKVLNVPLKDDDNGEETKIFDSPLDFDSIIIENDAALDLICTECNKYFETRRRLLRHIYVVHNKKAIHPCNLCGKMFKSLCYLKLHENTHKFGTELKCEICSILCKSKQTLIAHKKRMHSNSSRFECDSCNKEFYSKADLRSHYRKLHLGITFKCPDCDKIYTDESYFKYHRRTHQPGYVPTIYNCLECDAKFSTKQNLRRHMRGHTLDNNFICDVCGKRLSSMKGFQTHRRIHTGEKPYKCDYCDKHFASKDVLSQHKLIHTKEKRHTCDVCSKRFSQRSSLRIHLRTHTGECPYVCNICNESFRVKVALMSHLKVHNVCYEPTNVM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -