Vsat174233.1
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- ZNF131
- Assembly
- GCA_036346205.1
- Location
- JARFJB010002216.1:535487-539865[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 3.6 2.9e+03 2.6 0.1 13 23 114 124 112 124 0.90 2 21 0.25 2e+02 6.2 0.3 1 23 193 215 193 215 0.94 3 21 0.015 12 10.0 0.6 1 23 219 241 219 241 0.96 4 21 0.22 1.7e+02 6.4 0.4 1 23 247 270 247 270 0.91 5 21 0.023 18 9.5 3.2 1 23 276 298 276 298 0.93 6 21 0.0021 1.7 12.7 2.0 1 23 304 327 304 327 0.91 7 21 7e-06 0.0056 20.5 2.6 3 23 336 356 334 356 0.96 8 21 2.9e-05 0.024 18.6 0.3 2 23 362 383 361 383 0.97 9 21 4.5e-05 0.036 18.0 2.5 1 23 389 411 389 411 0.98 10 21 3.9e-05 0.031 18.2 0.3 1 23 417 439 417 439 0.97 11 21 7.9e-05 0.063 17.2 0.7 2 23 468 489 467 489 0.97 12 21 0.074 59 7.9 0.0 1 23 509 531 509 531 0.96 13 21 0.033 26 9.0 1.6 1 23 535 557 535 557 0.92 14 21 0.11 91 7.3 0.5 3 23 565 586 563 586 0.97 15 21 0.00058 0.47 14.5 0.8 1 23 592 614 592 614 0.97 16 21 0.00011 0.089 16.8 1.0 1 23 620 643 620 643 0.95 17 21 1.3e-05 0.011 19.7 2.1 2 23 655 676 654 676 0.97 18 21 1.4e-05 0.011 19.6 0.7 3 23 688 708 686 708 0.96 19 21 4.4e-05 0.035 18.0 0.8 1 23 714 736 714 736 0.98 20 21 8.5e-06 0.0068 20.3 0.4 1 23 742 764 742 764 0.98 21 21 0.13 1e+02 7.1 0.5 1 21 770 790 770 791 0.93
Sequence Information
- Coding Sequence
- ATGCGCTTGTGCGATTTAAACTTTAAAAGGTCCAAAAAAAAACGTCCCTTTGGTGGAGTCCAAATTAAACAAGAAGTATATCACAGTGAACATCCGTCAGATGGCATTTACCAAAATAATTTAACGAAACTTCATCCAAAACCAAAACAATATATTAAAGAAGAAAGTACTGAAGATGAGTTAAATCTTACCTTCAGTACTGACAATGAAGAAGAGGAATTAGAAGTTGTCTTTAACGATGGTAACGAAACAGTTGCGAGTCAAATTCAGAAATTGCTTTCTGAAGATCATACAGGTTACAATATTTGTGTATTTTGCAATAATGGGAAAGTAATGGgtcctaaacaattaaaaaagcatTATAAGAAACACGAGCAGATTTTAATAcactttaaagataaaaaaaccgAAGAATCTTCCAATTTTTACTGCCATATTTGTAAGGATGATCAGACTATGTCGAAAGTCGAACTGAAGGAGCACTACGATAAAGTACACGCTGTTAAAATTACGAACAATAAAAAGTTCTTTAGAAGAGCAAGATCTAAGCGTCCCCGTTCACCTCGTCCAGAGGTTTTTAGATGCGAAATCTGTTCTGAGGAATTTTTGACCAAACCATTACTGGATGAGCACTTCGAGAAGCATGATGATCAGTACTCATGCGATATTTGTGATACGGGTTTTAAGAAGTTGATCGATTATACTTTTCACATGCAAGAGCATAGTGAGGACAAGTTGTTTAAGTGCCCGCTGTGTGATTTTGTTACTGATAAAGGATATTTGGTCAAGTCTCACTTGTATTCTGTCCACGATCAGTTTAAGAAATATAAATGCGAGTTATGCGGTAAAGGATTTGCAATCTTCACCCATTTCCAAGAACACAAGTATTTCCACACAGGTGAAAAACCGTTTCAGTGTAAAGAGTGCGGGCAGAAATTTATGTACACGCGTTATTTAAATTCTCACCGTGTCCAAATGCATAAAAAAGCTAGTAAGGGTATTAATTGCCCTACTTGCAATAAGGTCTATTCACACCGCAACAGTTTGAACACCCATATGAAGTCACACACTGGCGCTGTATCTGTGTGTGATGTCTGCGGAAAGACTTTAAGCAGTAACGAAAAGTTACGTTTGCATTATCGCATTCATACTGGAGAAAAGCCATATAAATGTGATTATTGTCAGAAACGTTTCAAGACAAGTTCATACCGTGCGGAGCACGAGCGTATTCACACTGGTGAGAAACCGTACGAGTGCCCCTTCTGTGGTAAGGGCTTTTCGCAACGCACAAGTATGGTTATACATTCACGTGGACATACGGGAGAGAAACcGAATGGTATAACAGAACCAGACAATaagtattgtttaataataaatacacaaaatcCCAAACCTATTTGGACTTGTACGAAGTGTAATGAAGCTTTTGATACATCGCGAACACTGCGCATTCATCGACAAATTCATCGCAAAAATGACAGTGATATACAGTACAATTACCAATACCACGAAAGTCGGGGTATCTACTCGTGTGGTACTTGCGATGTTGAAACTGCTACtaaagaagaaattgaaaaacatgTTTTGGAGCATGAAGAGAAATACACATGTTCCGTTTGTGACGAGGCCTTTGTTAAACCCTACGAATACTCTTGCCACTTATACAGTCACGATCAGTCGAAGGGTTTTGGATGCCCTTTTTGTAAATACACAACAATGAGAAGAACTGCGATTATGATACATATTAATACATTCCATTTGCGGAAATTCATTTATAACTGTGAGCTCTGTGGGAAAGGATTCAATGACTGTGTTTTGTTTAAGGAACATGGGAATGTGCACGCAGGCTTAAGGCCTTTTCGTTGTGTGGTTTGCGATAAAGATTTTGCATTTTCAAGCTACCTCACCTCACATCAAGTCCGTTATCATAGAGTGACGATAGATGGCGTTCTGGGCTCGAATCAATGCTATATCTGCCATAAAAGTTTTATTAGGAAGACTACATTAGAGAATCATATTAATGCTCACGGGAAAAAGAAAGTCCACGAAAAGCGACACTTGTGCGATATTTGTGGAAAAGGCTTTGCGCAAACCGACAAATTGCGCATACACTATCGCGTGCACACTGGTATAAAACCTTACACATGCTCATACTGTGCGAAAGGTTTCACTAAACGAGATTATTTAATAATGCACGAGCGTGTGCATAGCGGTGAAAAACCGTATTCGTGCCAGTATTGTGGAAAGAGTTTTAATCAGGGTGCCCCTTTACGCCTTCACATACGCAATCACACCGGTGAACGGCCATATTTATGCCATCTTTGTAGTAATGGTTTTATATCGAGAAGCGTTCTTAatctgcatttaaaaaattgtccTGGTAAGTTAGGTTAA
- Protein Sequence
- MRLCDLNFKRSKKKRPFGGVQIKQEVYHSEHPSDGIYQNNLTKLHPKPKQYIKEESTEDELNLTFSTDNEEEELEVVFNDGNETVASQIQKLLSEDHTGYNICVFCNNGKVMGPKQLKKHYKKHEQILIHFKDKKTEESSNFYCHICKDDQTMSKVELKEHYDKVHAVKITNNKKFFRRARSKRPRSPRPEVFRCEICSEEFLTKPLLDEHFEKHDDQYSCDICDTGFKKLIDYTFHMQEHSEDKLFKCPLCDFVTDKGYLVKSHLYSVHDQFKKYKCELCGKGFAIFTHFQEHKYFHTGEKPFQCKECGQKFMYTRYLNSHRVQMHKKASKGINCPTCNKVYSHRNSLNTHMKSHTGAVSVCDVCGKTLSSNEKLRLHYRIHTGEKPYKCDYCQKRFKTSSYRAEHERIHTGEKPYECPFCGKGFSQRTSMVIHSRGHTGEKPNGITEPDNKYCLIINTQNPKPIWTCTKCNEAFDTSRTLRIHRQIHRKNDSDIQYNYQYHESRGIYSCGTCDVETATKEEIEKHVLEHEEKYTCSVCDEAFVKPYEYSCHLYSHDQSKGFGCPFCKYTTMRRTAIMIHINTFHLRKFIYNCELCGKGFNDCVLFKEHGNVHAGLRPFRCVVCDKDFAFSSYLTSHQVRYHRVTIDGVLGSNQCYICHKSFIRKTTLENHINAHGKKKVHEKRHLCDICGKGFAQTDKLRIHYRVHTGIKPYTCSYCAKGFTKRDYLIMHERVHSGEKPYSCQYCGKSFNQGAPLRLHIRNHTGERPYLCHLCSNGFISRSVLNLHLKNCPGKLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -