Basic Information

Insect: Vesta saturnalis
Gene Symbol: su(Hw)
Assembly: GCA_036346205.1
Location: JARFJB010000209.1:4001816-4009967[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.5e-05 0.012 19.5 0.2 3 23 165 186 164 186 0.95

2 13 0.052 41 8.4 2.0 2 23 218 240 217 240 0.90

3 13 1.9e-05 0.015 19.2 0.0 2 23 247 268 246 268 0.96

4 13 0.0002 0.16 16.0 1.7 1 20 273 292 273 294 0.95

5 13 8.3e-08 6.6e-05 26.6 0.8 1 23 305 327 305 327 0.98

6 13 5e-06 0.004 21.0 0.6 1 23 337 359 337 359 0.99

7 13 1.7e-05 0.014 19.3 0.2 1 23 365 387 365 387 0.98

8 13 9.7e-05 0.077 17.0 0.6 1 23 393 415 393 415 0.99

9 13 6.6e-05 0.053 17.5 5.7 1 23 421 443 421 443 0.95

10 13 0.00011 0.092 16.7 2.7 1 23 449 472 449 472 0.95

11 13 2e-05 0.016 19.1 1.6 2 23 479 500 478 500 0.95

12 13 1.4e-06 0.0011 22.8 5.3 1 23 506 528 506 528 0.99

13 13 1.7e-05 0.014 19.3 3.7 2 23 535 557 534 557 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.5e-05	0.012	19.5	0.2	3	23	165	186	164	186	0.95
2	13	0.052	41	8.4	2.0	2	23	218	240	217	240	0.90
3	13	1.9e-05	0.015	19.2	0.0	2	23	247	268	246	268	0.96
4	13	0.0002	0.16	16.0	1.7	1	20	273	292	273	294	0.95
5	13	8.3e-08	6.6e-05	26.6	0.8	1	23	305	327	305	327	0.98
6	13	5e-06	0.004	21.0	0.6	1	23	337	359	337	359	0.99
7	13	1.7e-05	0.014	19.3	0.2	1	23	365	387	365	387	0.98
8	13	9.7e-05	0.077	17.0	0.6	1	23	393	415	393	415	0.99
9	13	6.6e-05	0.053	17.5	5.7	1	23	421	443	421	443	0.95
10	13	0.00011	0.092	16.7	2.7	1	23	449	472	449	472	0.95
11	13	2e-05	0.016	19.1	1.6	2	23	479	500	478	500	0.95
12	13	1.4e-06	0.0011	22.8	5.3	1	23	506	528	506	528	0.99
13	13	1.7e-05	0.014	19.3	3.7	2	23	535	557	534	557	0.94

Sequence Information

Coding Sequence: ATGAACACTGCTAGAGGTGAAGAAGAAACAGATATGGATGACGTAAAaacaactattttaaaaaatatgactgTAATAGAACCCGTAAATATATTGACTGATCATTTTGAACTAATCGGTAATTCTGAtggaaatttagaaataaatacaattgaaTGTTTAGAGGAGGGAGAACAAATTGGtgttACTGAAGATATAACATCCGGACAAAATAAGATTATTAACAATGACACACACTATATTGAGCAAGGGGATGAGTACATGGACGAGGATGCATTAATAGACGACTCCACGATTATTTCTAACGATTTACCGAAGGGGGAAGGTTTAACAGATGTAGAAGATGCAGAAGAGGAGGTGGAAGAAGAAGAGGAGGACGGGGATTGTGATGAAGAGGCACCCACAGATAACAATAGTGTCATTGGTATGGATTCTACTTGTGAACGAGTTGATGAAGCACAGATTGATAAGAAATTAGATCAAATTAATATTTGTACTCTTTGTGAACGAGTGTTTAAAACAGCTGCGAGTTTAAAACGTCACATTATAGTTTCCCATGCTATCGAGGAAGAGCAAGATGATCCGTTAGCTTTTCAGTTATGCTTATGTTGCGGTGAACCCTTAGATTCTGCCCAtacatcggGTGATTTGAAATGTGATATATGCGATAAACTGTTTATTTTACAATGCAGTTTAGACCGTCATAAAAGTTTCGATCACTCTTCAGGAGATGTATGGCCGTGCCCTGAATGTGATAATATATTTTCGCAACGATCCTTATTGATAGAACATATACAATCCCATCCCTTGAATAAATTTTCTTGTCGACAGTGTAATCGTGAATTTACACGTAAATATCATTTAGATCGTCATGTTGCCCAAACAGGTTGCAATGGAGTTCcaagaaataaatttgaatgtcAGGTTTGCCAAAAAGTCTTTTCTCGTAAGGATAATTTAAGAGATCATTTACGTGCCCATGCGGgcgaaattaaaaagaaaaggtTATTTACTTGTCAATATTGTGAAAAGCAATTTAGAGGAGCTGCTATGCTTACTGTTCACTTAAGGACGCATACAGGAGAAAAACCTTATGCATGTGATTTGTGTCCAAAACGCTTTCCATCTGGTGGAGCGTTAAAAAAACATAGAAGAATGCATACCGGAGAAAAACCATATGAATGTCCAcagTGCTTCAATAGATTTGCTGCTAAAGAAACGTTAAATAGACATGTTCGTACTCACACTGGTAATAAACCACACTCATGTCATTTTTGTGGAAAATCCTTTATACAAGCAACACAATTACGTGCACACATATTTCATCACACAGGACAAAATGCTTATACTTGCACTTATTGCAATCGAGCATTTAACCGACGAACACGTCTTACCACACATGTTAAGTTTGTACATGAGGGAGCTAAACCTATGGAATGTAATGAATGCAACAAAACTTTCTTCCGTAAAGAAGATTTATCACGGCATAAACTCCTGCACTCAGGTGTTAAACCGTACCAATGTGAAATATGTCATAAATGCTTCTCAATAAAATCATCTTTAAAACTACATATGTTAACTCATCGAAAAGAGCAACCATGTAGTTGTGACCAATGTGGAAGAGCTTTTATTCGCCAAGATTGTTTATTACGTCATATGCGTGCCAAACATAGAGATGTTTTAGAAGACATAATGGCAGGTGCAGAAAAGAGAAGACTTCAACAACACCTTCTAAGTGCTGCATCAGATGCTGCTAAACTTGGGAACAAAAGTGCTAATAATACTATGATATGGAATGAGCTTATTCTTCCTGATTCAATTAAAGAACTACTTACTTTACTTGTGGACGAAGATACATTGGCATCTTTTGGATGGCCTGATGCACCTGTTGATAAATTACTTGATTCTGTAATAAAACGTTGTGGACATAAACCTGCTTCTGAGGATGATTTCGATTATATTGGCAGAATGCGAGAAAATGCAAAACTGTTATTTACTGTTGTTATTGATGATGAAGCTGTTAAATCCCTTTTAAACAATCAAACTGTTGATGAAGTTATTTTACATGTGTTAAGATTGGCTAAGTCTGATTAA
Protein Sequence: MNTARGEEETDMDDVKTTILKNMTVIEPVNILTDHFELIGNSDGNLEINTIECLEEGEQIGVTEDITSGQNKIINNDTHYIEQGDEYMDEDALIDDSTIISNDLPKGEGLTDVEDAEEEVEEEEEDGDCDEEAPTDNNSVIGMDSTCERVDEAQIDKKLDQINICTLCERVFKTAASLKRHIIVSHAIEEEQDDPLAFQLCLCCGEPLDSAHTSGDLKCDICDKLFILQCSLDRHKSFDHSSGDVWPCPECDNIFSQRSLLIEHIQSHPLNKFSCRQCNREFTRKYHLDRHVAQTGCNGVPRNKFECQVCQKVFSRKDNLRDHLRAHAGEIKKKRLFTCQYCEKQFRGAAMLTVHLRTHTGEKPYACDLCPKRFPSGGALKKHRRMHTGEKPYECPQCFNRFAAKETLNRHVRTHTGNKPHSCHFCGKSFIQATQLRAHIFHHTGQNAYTCTYCNRAFNRRTRLTTHVKFVHEGAKPMECNECNKTFFRKEDLSRHKLLHSGVKPYQCEICHKCFSIKSSLKLHMLTHRKEQPCSCDQCGRAFIRQDCLLRHMRAKHRDVLEDIMAGAEKRRLQQHLLSAASDAAKLGNKSANNTMIWNELILPDSIKELLTLLVDEDTLASFGWPDAPVDKLLDSVIKRCGHKPASEDDFDYIGRMRENAKLLFTVVIDDEAVKSLLNNQTVDEVILHVLRLAKSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -