Vsat092671.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Vesta saturnalis
Gene Symbol
-
Assembly
GCA_036346205.1
Location
JARFJB010001486.1:61153-64294[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 2.2 1.7e+03 3.3 0.3 3 21 162 180 160 181 0.92
2 22 0.22 1.8e+02 6.4 0.5 2 21 208 227 207 228 0.93
3 22 0.096 77 7.5 0.8 2 21 255 274 254 275 0.93
4 22 2.3 1.9e+03 3.2 3.8 1 21 301 321 301 326 0.94
5 22 0.14 1.1e+02 7.0 0.3 2 23 377 398 377 398 0.96
6 22 1.7e-05 0.014 19.3 2.6 2 23 405 426 404 426 0.97
7 22 0.001 0.81 13.8 0.1 1 23 432 454 432 454 0.99
8 22 0.00025 0.2 15.6 0.9 1 23 460 482 460 482 0.98
9 22 2.1e-06 0.0017 22.2 1.0 1 23 488 510 488 510 0.99
10 22 0.00012 0.099 16.6 1.1 1 23 516 538 516 538 0.99
11 22 4.5e-06 0.0036 21.2 2.3 1 23 544 566 544 566 0.99
12 22 6.6e-05 0.053 17.5 4.5 1 23 572 594 572 594 0.98
13 22 6.4e-07 0.00051 23.8 0.9 1 23 600 622 600 622 0.99
14 22 2.5e-05 0.02 18.8 1.6 1 23 628 650 628 650 0.98
15 22 2.7e-05 0.022 18.7 4.6 1 23 656 678 656 678 0.99
16 22 9e-06 0.0072 20.2 0.4 1 23 684 706 684 706 0.99
17 22 2.6e-06 0.0021 21.9 2.4 1 23 712 734 712 734 0.99
18 22 7e-05 0.056 17.4 0.1 1 23 740 762 740 762 0.99
19 22 1.2e-05 0.0097 19.8 4.4 1 23 768 790 768 790 0.99
20 22 5.9e-06 0.0047 20.8 0.4 1 23 796 818 796 818 0.99
21 22 2.9e-05 0.023 18.6 4.0 1 23 824 846 824 846 0.99
22 22 0.0051 4.1 11.5 5.3 1 23 852 874 852 874 0.98

Sequence Information

Coding Sequence
ATGAACGACGAACTAAGACGCAGTCTTAATGGTGCCAACGACTGTATTCCTTACCCTACAAATgaTCTTAACTTAACAACAAATGCCGCAATTTGCAGTGAATGCTCCGGAACTATTGATCTCGCACACAAATTTAAACAGCAATGTTTAGAAACGGAGAAAAATATTCAGAATTATGTTAAAAAGTTGGgagaattttcaacaactttggATCTAATCCATTTATTACGACAGAATGAAGGAGAAAAGGTTGCACCTATACAGATTAAGCAGGAAATCAATGATGATACTGAGTCGGAGCCATTACAGGGGTTTTCAGGTAATGTTAAAGAAGAACTTGTTGATTGTAGTTATGAGACAGATATTGAACTTGACTCAACTTCGAACAATATTGAAGAGGAAAATTCCAATGTAGCTCCATATGTTcatgttgataatgttgaaacAGTACGAAATGAAGGCACTAAACAGATTGAGCTTGATTGTAAACATTGCAGTTACATTGCAACTGGAGAGGAGGatttcaatacacatttaaaacagTGCCCACCATATACTCCAATTCGTAATGATCAAACCGCTCGTAATAAAGGTATTAAACCAATTTTGGAAATTGAGCTTAATTGTAAACAGTGCAGTTATATAGCAAAGGGAAAGAAAGATTTGAACAAACATTTAAAGCAGTGTTCACCATATATTCGTGTTGATAATGTTGAGACCATTATTAATGAAGGTATTCCACCAATTTTGGATATTGAACTTAACTGTAATCACTGCAGTTACATAGCAAAGGACAAGGAGGACTTTAACACACATTTAAAACAGTGTCCACCATATATTCCTGTTGGTAATGTTGAAACTGTTCTTAATGAAGGTACTAAACCAATTTTGTGTATTGAGTTTAATTGTAAACACTGCAGTTACCTCGCAAAAGACGAGGAGGATTTCAAAACACATATTAAGCAATGTATTAATCATAATGATGATAAATTTGTCAAGTCTGATtgtgaaaatgtggaaaattgcATTTCTAAAAGTGAGAATGAAGAGGGTCCTAAACCTGATTGTAAGCTAGAGTTGTTCAATCCAACTCGCTATATCCGAAGACTATTTGGAAGGCCACTGAATGAGTGTGGCATATGTGGATATAAAACAGCGTTGAAACGTCGTTTAGTGTTACATCAAAAGCTTCACGATGAAAATAAGTTGTTGAAATGTACACAATGTGATTATGTATGTGCCCAGCGTAGTAATTTTAATATGCATATGCGTGTACACACTGGttataaaccatataaatgtgatcaatgtgaatacTCGACTGCTGCAAGTTCTGCTTTAGTCGTTCATAGACGTATTCACACTGGTGAAAAACCGTATTGTTGTAATGTCTGTGGTTATATGAGCATTTCCAAATCTGCTTTAACTGTGCATAATCGGATACATACAGGAAGTAAGCCATATCGATGCCCGATTTGTACTTACCGCACAATTACCAAGTCTTCTTTAACAGTTCACTTGCGAACACACACAGGGGATCGCCCTTATAAGTGCCATTTATGTCCGTACAATACTACAGCAAAATCAGCACTAAATATGCATATACGTATACATGAGGGTTATAAACCTTTCCAGTGTTCTGAATGTGAATATCGTTGTACACAGCGTAGCAGCCTCATTGTACACATGCGCATTCATACAGGTGATAAACCTTATCACTGTAAAGAATGTGAATACAAATGTAGTAATCGTAGTAGTTTAGTCGTTCACATGAGAATACATTCAGGAGAGACTCCGTACAAGTGTTCAGAATGTGAATACAGCACCGCTTCAAAGTCTTCTTTAAACGTACATATGAGAACTCATGGTGATAATAAGCCATTCATATGTGTTCAATGTGGTTATAAATGTGCACAGAGAAGTGGATTAACATTGCATATGAGAACACATACTGGCGATCGTCCGTACCAATGCTCTTTATGCGATTATCGTTGCAGTTATCACGGCAATCTTAAAGTCCACATGCGTGTACATACAGGTGAAACACCATACCAATGTTTCGTATGTGGGTATAGCACTACATCAAAATCTGCTTTAGTCGTTCACACAAGAATTCATACAGGCGAGAAACCATACGAATGCACAGAGTGCCCTTATAAATGTAGTACGAAAAGTAGCCTAAAAGTTCATTTACGTGTTCATACAGGTGAAACACCATACGAATGCACTGTTTGCCCTTATAAAACTACTGCTAACTCTGCATTAATTGTGCATATGAGAATTCACACAGGGGAGAAACCGTACAAGTGTACCGAGTGTTCGTATAAGTGTAGCACGAAATCCAGCTTGAAAGTGCATTTGCGTATACATACTGGAGAAACTCCATTTAAGTGCACCATTTGTGATTATAGTTCTACTTCTAATTCAGCATTAATCGTTCATACACGTATACACACAGGGGATAAACCATATCAGTGCAATGATTGTTCGTACAGGTGTAACAATAAAAATAGTCTTAAGGTGCATATGAAGGTGCATCGAGGTAGAACACCTTATAAATGTGCAATATGTAATTATGCTTGTAAGAAACGTTTTGTTTTGAAACGTCACATGCATGTGCATACAAAAGAAATgcttattaaagaatttaaacaaGATTTAGAGATGATGGAGATAAAGTTGGAGGAAGAATCTGAAATagtggtataa
Protein Sequence
MNDELRRSLNGANDCIPYPTNDLNLTTNAAICSECSGTIDLAHKFKQQCLETEKNIQNYVKKLGEFSTTLDLIHLLRQNEGEKVAPIQIKQEINDDTESEPLQGFSGNVKEELVDCSYETDIELDSTSNNIEEENSNVAPYVHVDNVETVRNEGTKQIELDCKHCSYIATGEEDFNTHLKQCPPYTPIRNDQTARNKGIKPILEIELNCKQCSYIAKGKKDLNKHLKQCSPYIRVDNVETIINEGIPPILDIELNCNHCSYIAKDKEDFNTHLKQCPPYIPVGNVETVLNEGTKPILCIEFNCKHCSYLAKDEEDFKTHIKQCINHNDDKFVKSDCENVENCISKSENEEGPKPDCKLELFNPTRYIRRLFGRPLNECGICGYKTALKRRLVLHQKLHDENKLLKCTQCDYVCAQRSNFNMHMRVHTGYKPYKCDQCEYSTAASSALVVHRRIHTGEKPYCCNVCGYMSISKSALTVHNRIHTGSKPYRCPICTYRTITKSSLTVHLRTHTGDRPYKCHLCPYNTTAKSALNMHIRIHEGYKPFQCSECEYRCTQRSSLIVHMRIHTGDKPYHCKECEYKCSNRSSLVVHMRIHSGETPYKCSECEYSTASKSSLNVHMRTHGDNKPFICVQCGYKCAQRSGLTLHMRTHTGDRPYQCSLCDYRCSYHGNLKVHMRVHTGETPYQCFVCGYSTTSKSALVVHTRIHTGEKPYECTECPYKCSTKSSLKVHLRVHTGETPYECTVCPYKTTANSALIVHMRIHTGEKPYKCTECSYKCSTKSSLKVHLRIHTGETPFKCTICDYSSTSNSALIVHTRIHTGDKPYQCNDCSYRCNNKNSLKVHMKVHRGRTPYKCAICNYACKKRFVLKRHMHVHTKEMLIKEFKQDLEMMEIKLEEESEIVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-