Basic Information

Transcription Factor Domain

TF Family: CG-1
Domain: CG-1 domain
PFAM: PF03859
TF Group: Unclassified Structure
Description: CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.6e-16 6e-11 45.7 0.2 76 116 18 57 10 57 0.91

2 3 0.52 1.2e+05 -3.7 0.0 72 96 105 129 102 134 0.70

3 3 0.0085 1.9e+03 2.1 0.0 26 64 184 222 172 228 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.6e-16	6e-11	45.7	0.2	76	116	18	57	10	57	0.91
2	3	0.52	1.2e+05	-3.7	0.0	72	96	105	129	102	134	0.70
3	3	0.0085	1.9e+03	2.1	0.0	26	64	184	222	172	228	0.79

Coding Sequence: ATGGACAAAGTAATTCATGCAGGTGGAGCTGATGTAGATGAAATAATTGCGCGAATGATGCAGTGTATATATGGATGTTACGTTCATTCCGCTATTCTACCAACCTTTCACCGAAGATGTTACTGGCTCCTTCAGAATCCCGATATAGTGTTAGTACATTACCTAAATGTACCTTATCCTGATGACAACAAGCTTGCTGTTATAACACCGAGTTTATCACTATGGGCGGATAAAAAGGAATGGACTAAGGAAGAGCTTATTTCACAATTAAAGCCGATGTTTTTTAGTGAAGACGAGCCTGATTTAAACAACGAATTAGAAATATCGactGCTGAAACGGTCGAAGCAATTGTAAGTCAATTAATGGAAAAGCAAAGAGTAGCACGACAAGCGGCGTTGGTAAAACAATTAGAATGCGGATGTCCTGATTCGACATGTGCCGACGGTAAATCGTGCTCCCATCCCATGCGTCGTATAACAACCGCTAAGAATGAATTAGGAAATTCCTTACCATCTTCTAGCTCAAATTCGCGACCACCCAGTCGTGCAGAAAACAACCAAGTATCTTCAACGACCGGTTCCGGTGGTATGTTTTTAAGTAATAACCATACCGGCAGAGTGTACTCTCGTGATACACGTAATCAACACGCGCAATCGAGTGGACAAAACTCGGCCAACACACCACCTTTAGTGCTTAGTCTTTCACAAATTCAAGGAGGAGGTGGTTTACTCATACTAAACAGTAACTCAACCACATCTACCAATTCAACAACCCATCAATCATTTGTAGCTCCAGTTTCCGTAGCAAATTTTGTGTCAAGCACGACTACTAGCAGAGTTCATTCCAAACTGGATAGATCCACAAAAATGGACCGATCGTTTTAA
Protein Sequence: MDKVIHAGGADVDEIIARMMQCIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLSLWADKKEWTKEELISQLKPMFFSEDEPDLNNELEISTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADGKSCSHPMRRITTAKNELGNSLPSSSSNSRPPSRAENNQVSSTTGSGGMFLSNNHTGRVYSRDTRNQHAQSSGQNSANTPPLVLSLSQIQGGGGLLILNSNSTTSTNSTTHQSFVAPVSVANFVSSTTTSRVHSKLDRSTKMDRSF

Sequence clustering based on sequence similarity using MMseqs2