Basic Information

Gene Symbol
dnajc2
Assembly
GCA_036346205.1
Location
JARFJB010002109.1:1128292-1130148[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.4 5.3e+04 -2.0 1.5 6 17 297 308 296 312 0.83
2 3 0.00014 1.4 12.6 0.0 1 31 434 468 434 472 0.85
3 3 2.3e-12 2.3e-08 37.6 0.1 2 44 554 600 553 602 0.91

Sequence Information

Coding Sequence
ATGGGAACAAACGTAACATCAGATAACCTCTGTAACTCTGTAGCAATTCGTTACCGCTTTGTATATAACCTAATCGATGGTATCCCACAAGTTGAATTCATTGCCCATGAAGTTCAAGAGtgtgaaattgaaaaattagaaGATCAGGAACCGAGTGATATTGATACGAACAATGTGATATTTGAAGACAATGTTGATTACTTGAGGAGTCTCGATCCCAAAGAATGGAAAAAACAAGATCATTATAAAGTATTAGGCGTAAAAAATCAACGTTTCGATGCATCTGAAGAAGTAATTAAGACAGCTTATAGAAAAATGGTACTTAAACACCATCCAGATAAACGTAAAGCTTTAGGGGAAGAGATTAGACCTGATGATGATTATTTTACATGTATTACGATGGCATACGAAACATTAGGAACATTAAGTAAAAGACGAGCCTATGATTCTGTTGATCCAGAATTTGATGATTCCATTCCATCTGGTTCGGAGTTAAAACAggatttttataacgtttttagtttttattttgatcTCAATTCACGGTGGTCTGAAAAACAACCTGTATTAAAATTAGGTGGACCTAATGCCAAAAGAGAACAAGTTGATAAGTTTTATTCATTTTGGTATGATTTTAAGTCATGGCGTGAGTTTTCATATGAAGATGAAGAAGATAAGGATAAATGTCAGGATCGTGATGAGCGTCGCATGTGTGAGAAAATAAATAGGGCAGAACGTCAGcgtaagaaaaaagaagaaatgacGAGGATACGTAATTTGGTAGATTTAGCGTATAATTCTGATCcaagaattgcaaaatttaaacaaGAAGATAAAGACAGGAAACTGGCTGCAAAGCGAGCTAAACAGTCTGCTGCTCAAGCTAAGAAAGAGGAAGAGGAGCGTATTTTAAGAGAGGTAGAATTAGCAAAAGAAAAGGCTGAGGCTGTTGAACGTGCTAGGATCGAACAGGTACGACAAGAGCGTGAAGTCCAGAAGAAAGCTATTAAGAAGGAGAGAAAAACATTTAGGGATATTTGTAAGGGTAATAATTATTATGCAAATGATGATAATGAAAAGTTATTACATATGCAAGCTGTAGATAAGATATGTGAGATGTTAAATTTGACCGAATTAGAAGAACTGAATAGTAAACTGCTAAATAATGGACATAATACTTTCTTGAAGGTTAGGAAGGAATGTGAAGCTCGTTCTGAAGCCGAGAGACAAGCTTCAATAGAATCAATGTCTCAAAAAACTAATGATGCAATCAAAAACATGAAAAATCATGTAACAACAAAAACAGAATGGTCACCTGACCATATACAGTTATTGATAAAAGCTGTAAATCTATTTCCCGCAGGTACAAATCAAAGATGGGAAGTTGTCGCTAATTTTATCAATCAGCATGGTACCTTTCCTGGTGATTCATTAAAATTCAATGCTAAAGATGTACTGGCAAAAGCAAAAGATTTACAAAATACTGATTTTTCTAAAAGTGATCTTAAAGAAGCTGCTAATAAACAAgcttttgataattttgaaaaagataaaCGTACTATACAAGTAGTGAATGAAtctgaaattagtaaaaaaactgATGCATGTTCGAGAAAAccacttaaaacaaaaacaactGAAAATGGTTTAAGTACAGAAAATGTATGGACTGCAAATGAACAACAACTCTTAGAACAAGCTCTCAAAACATTTCCAGCTACAACAGCAGATCGTTGGGATAGAATTGCTGAATGTATACCAAATCGTTCGAAAAAAGATTGTATGAAACGTTATAAAGAATTGGTGgaaataattaaagcaaaaaaagcTGCTCAAGCAGCAGTAAAACctaaataa
Protein Sequence
MGTNVTSDNLCNSVAIRYRFVYNLIDGIPQVEFIAHEVQECEIEKLEDQEPSDIDTNNVIFEDNVDYLRSLDPKEWKKQDHYKVLGVKNQRFDASEEVIKTAYRKMVLKHHPDKRKALGEEIRPDDDYFTCITMAYETLGTLSKRRAYDSVDPEFDDSIPSGSELKQDFYNVFSFYFDLNSRWSEKQPVLKLGGPNAKREQVDKFYSFWYDFKSWREFSYEDEEDKDKCQDRDERRMCEKINRAERQRKKKEEMTRIRNLVDLAYNSDPRIAKFKQEDKDRKLAAKRAKQSAAQAKKEEEERILREVELAKEKAEAVERARIEQVRQEREVQKKAIKKERKTFRDICKGNNYYANDDNEKLLHMQAVDKICEMLNLTELEELNSKLLNNGHNTFLKVRKECEARSEAERQASIESMSQKTNDAIKNMKNHVTTKTEWSPDHIQLLIKAVNLFPAGTNQRWEVVANFINQHGTFPGDSLKFNAKDVLAKAKDLQNTDFSKSDLKEAANKQAFDNFEKDKRTIQVVNESEISKKTDACSRKPLKTKTTENGLSTENVWTANEQQLLEQALKTFPATTADRWDRIAECIPNRSKKDCMKRYKELVEIIKAKKAAQAAVKPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-