Basic Information

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.18 1.8e+03 2.7 0.0 30 46 3 19 1 19 0.83

2 5 6.5e-08 0.00065 23.3 0.2 3 35 27 61 25 62 0.94

3 5 8.5e-06 0.084 16.5 0.0 3 46 80 127 79 127 0.97

4 5 1e-09 9.9e-06 29.1 0.0 1 46 133 178 133 178 0.96

5 5 0.044 4.4e+02 4.6 0.0 1 17 184 200 184 202 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.18	1.8e+03	2.7	0.0	30	46	3	19	1	19	0.83
2	5	6.5e-08	0.00065	23.3	0.2	3	35	27	61	25	62	0.94
3	5	8.5e-06	0.084	16.5	0.0	3	46	80	127	79	127	0.97
4	5	1e-09	9.9e-06	29.1	0.0	1	46	133	178	133	178	0.96
5	5	0.044	4.4e+02	4.6	0.0	1	17	184	200	184	202	0.94

Coding Sequence: atgttaataggtGCACGAGGACCAAACGAATGCAAAGCATTATGGAATATCTATCTTCATCcagatataaataaaactttgtggacagatgaagaaaatgaaaaaatcaaaCTGTTAGCGAAGAAGTACAATGCCCAAAATTGGGATTTAATCGCAATAGAATTAAATACAAACCGTTCCGGttatttaacatttctaaatTATGTCACAAATTTACACAATAAGTTTAAAATTGATAGATTTACACCAAGCGAAGATCGGCGACTTCAGGATATTATTGAAGAATATCGTGTAGGATCTTTTATACCGTGGCATAAAGTTACGATTGCTTTTAAAGATCGTGGAAGACAGCAACTTTATCATcggtataaatattatttatcgaAAGATTCTACTAAAGGCGCCTTTACTGAAGCAGAAGATGTATTATTaatatacttaattaaaaaatttggaaagaaTTATTCCAAATGTGCTACATACGTGCCCCACAGAAATGCTATACAAATTCGAAATCGTCACTCAACTTATCTTAACAGATGGGTAACACGAGGAAATTATACACAAGCCGATGACGAACATATATTGAAATATGTGAAGGTAGGTTATCATTGA
Protein Sequence: MLIGARGPNECKALWNIYLHPDINKTLWTDEENEKIKLLAKKYNAQNWDLIAIELNTNRSGYLTFLNYVTNLHNKFKIDRFTPSEDRRLQDIIEEYRVGSFIPWHKVTIAFKDRGRQQLYHRYKYYLSKDSTKGAFTEAEDVLLIYLIKKFGKNYSKCATYVPHRNAIQIRNRHSTYLNRWVTRGNYTQADDEHILKYVKVGYH

Sequence clustering based on sequence similarity using MMseqs2