Vsat116429.1
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- -
- Assembly
- GCA_036346205.1
- Location
- JARFJB010001836.1:755655-757421[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.2e-07 6.3e-05 26.1 0.1 5 38 1 33 1 38 0.92
Sequence Information
- Coding Sequence
- ATGAAAGAAGCAATAGCAGCGATTAGAAATGGAACTTCCTCTCGTCGGGCAGCAGAGCAGTTTTCTGTGAAAAGATCGACCCTCATTTCTAGAATACAAAAACTCAAAGAAAAGGGCAATTTCCGAGATGTAGATTCTGGAAACGAAAGTGAGGAAAACGGAACAGAAAAGAAGTATTCGAACAAATATTCTTCGCGACAAGTCTTCACCAACAATGAAGAGAGAGAACTCGttctttatttagaaaaatgttctcGTGTTAATTATGGATTAACAACAAAACAGACTAGAGTTCTAGCTTTCGATTATGCGAAACTCGTTAAGAGTAAAAATATTCCGATGCGATGGCATGAAATTGGAATGGCTGGAAAGGACTGGCTAGAAGGTTTTCTAAAAAGAACTAACACTTTGAGTCTTCGAAAACCGGAAAGCACTAGTGTGTTGAGAGCTTCAGGATTCAATGCTAATAAAGTGaacgattttttcataaaactgaGATCGGTTATAGAAAAATACAAGTTCAAACCGGAACAAATTTTCAATGTTGACGAGTCTGGTGTAAGTACTGTGATCAAAACTGTCAAAGTAATAGCGTCGAAAAAAAGTAAACAAGTTGGTATTGCTGCATCTGGCGAACGAGGAGAATTAACTACATTTGTGGGTATTGTGTGTGCGACTGGAACTTGTCTCCCTCCAGTATACATTTTTCCTCGTGTTAGACACCCTGAAGATTATATAGAAAATGGACCAGTGTCCACTTTAGCTTTGGGCAATAAAACGGGTTGGATGGACCACACATTTTTTCTTGAAGTACTGAAACATATTCAGAAGCACACCAAATGTTTAGCAGAACAGAAAATTTTGCTACTATTAGACAATCACAAATCACATATCAGCATTTCAGCTCTAGAATATTGTAAAGCAAATGGTATTGTTGTTCTTTCATTCCCACCTCATTGCTCCCATCGGATGCAACCACTTGATATTGGAATATTTGGGCCGTTTAAAACTCGATCTGCCTCTGCATTCAATGATTGGCTTTCGGAGCATCCTGGACGTTCAATTGCTCTGAGAAATATTGCTCATTTGACTAAGGGTCCGTTTAAAAATTCCTTCACTCCAGCTAACATAGTGGCATCTTTCAAAAAAGCAGGGATATGTCCCCTTAATTCACAGATTTTTACAGACGTCGATTTTGCTCCGAACACAGTAGCCTTTGTACCAGAAAATAGTGCATTGGAGAATTCTGAAAATATGAATCACACTATGGCAGAAAATGACTCACCTCAACTAAATATAGATGCAGTTCCATCGACCAGCAGGAGCAACATCAACGATCATCTTAAAATTAGAACGCAAGCATCTCCCGCAGATGTCCGACCGTTTCCAAAAAAACAAGCCGAAAATATACAAAAACGGAAGAGTAATACACAGAGAGGAGCAACAATTTATACCGATACACCGGAGTTGGAAAACATAAAAGCAAAAGAAGCGAATAAAGCACAGAAGCCAGATTCAAAGAAGAAAAATAAGATCAGACGTGATTTATTCTCGGaagaacgaaaagaaaaaaaaacgaagcaACAATGTGTGAAAGGCCAACGAATGAGAGAATCTTCTGATTCTGCTGTTTCTGATTCAGGAGACGAATGTTGCGAGGAGCCTCCTTTCTTATTAGACAATGAAATTCTGTGCATAGGAGATTTCATTTTAGTAcagtttgcaacaaaaaaatCAACAATTCACTACATAGGAAGAATAGAATAA
- Protein Sequence
- MKEAIAAIRNGTSSRRAAEQFSVKRSTLISRIQKLKEKGNFRDVDSGNESEENGTEKKYSNKYSSRQVFTNNEERELVLYLEKCSRVNYGLTTKQTRVLAFDYAKLVKSKNIPMRWHEIGMAGKDWLEGFLKRTNTLSLRKPESTSVLRASGFNANKVNDFFIKLRSVIEKYKFKPEQIFNVDESGVSTVIKTVKVIASKKSKQVGIAASGERGELTTFVGIVCATGTCLPPVYIFPRVRHPEDYIENGPVSTLALGNKTGWMDHTFFLEVLKHIQKHTKCLAEQKILLLLDNHKSHISISALEYCKANGIVVLSFPPHCSHRMQPLDIGIFGPFKTRSASAFNDWLSEHPGRSIALRNIAHLTKGPFKNSFTPANIVASFKKAGICPLNSQIFTDVDFAPNTVAFVPENSALENSENMNHTMAENDSPQLNIDAVPSTSRSNINDHLKIRTQASPADVRPFPKKQAENIQKRKSNTQRGATIYTDTPELENIKAKEANKAQKPDSKKKNKIRRDLFSEERKEKKTKQQCVKGQRMRESSDSAVSDSGDECCEEPPFLLDNEILCIGDFILVQFATKKSTIHYIGRIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01516450; iTF_01517136; iTF_01516386; iTF_01516408; iTF_01516445;
- 90% Identity
- iTF_01516450; iTF_01517136;
- 80% Identity
- -