Vsat171092.1
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- -
- Assembly
- GCA_036346205.1
- Location
- JARFJB010002190.1:173493-173819[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-07 3.4e-05 27.0 0.0 4 38 17 51 14 56 0.88
Sequence Information
- Coding Sequence
- ATGGCAAGGAAGCCAAAACCAAGAAAAATAGGGTATGCATCTAAAAAAGATATGACTGCGGCTGTTGATGCCGTTCTTCATGATGGAATGCCATTGAGGCAAGCTGCccagaattttaatgtaaaatacgtgACATTATTTCGATATGTTAAAAAGCAACGGCtaaatcccgatatcgacgttcgtATGGAACCTCATTATGATGTAAACCGAGTTTTTACAGAAAATAAGGAATCTTCATTAGCTGACTATATCCAGACATGTAGCCAAATTGCCCATGGGTTGACTACCGTCAAAGTAGGACACCTGGCATACGGCAGAATGTGA
- Protein Sequence
- MARKPKPRKIGYASKKDMTAAVDAVLHDGMPLRQAAQNFNVKYVTLFRYVKKQRLNPDIDVRMEPHYDVNRVFTENKESSLADYIQTCSQIAHGLTTVKVGHLAYGRM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01516434;
- 90% Identity
- iTF_01516434; iTF_01516429; iTF_01517013; iTF_01515770; iTF_01516244;
- 80% Identity
- -