Vsat120356.1
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- -
- Assembly
- GCA_036346205.1
- Location
- JARFJB010001883.1:7407849-7416434[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00025 0.026 17.7 0.0 14 40 87 111 73 116 0.74 2 2 1.6 1.6e+02 5.6 0.0 4 32 166 196 163 205 0.84
Sequence Information
- Coding Sequence
- ATGGAATATTCTTTTCACGAACTCACCAATATGCATTTAGTATTAGGAGAGTGTAGAATGAATTGTCGAGCAGCAGCACGAATGTACGGAGAAAGATTTTCAAACAGATGTGTTCCCCATCATTCCACCTTTGCTGCAGTAGATAGACGGCTAAGTGAATTTGGGACATTGAAGAAATCCACTGCAGATGTAGGTCGCCCTCGGCAAGTTCACGTTGAAATGGAAGAAGCAATCCTAAACgctgttgaagaaaatccaagagaAAGCTTGAGAAGACTGGCAAGAATATTTGACATACCAAAGGATACTGTTCACCGAACTTTGAAAGAACAACTTCTGTCCAAGAATTCTCGACGACGGTTAACGGAATTGTATGCAAAACGTAGGATACCTCGTCACACAATATTGGCTCGCCTTTACCAACGTTTACGCGAACATGGTACATTTATGAAACGAACTGCTGACTGTGGTCGCCATCGAGAAGTACGAACTGGGCAACTAGAAGAAGCAATTCTCGATATAGTTTTTGAGTCACCAGAAAcaagtactcgaaaaattgccAACATATTGAATGTAAACAACTTTACCGTATTCAAAATTCTAAAAGAGCAGCATTTGTATCAGTTTCATATTCAACTTGTACAGGCGCTACTACCGAGAGTCTTCTTACCGCGTCTAGCTTTTGACTAA
- Protein Sequence
- MEYSFHELTNMHLVLGECRMNCRAAARMYGERFSNRCVPHHSTFAAVDRRLSEFGTLKKSTADVGRPRQVHVEMEEAILNAVEENPRESLRRLARIFDIPKDTVHRTLKEQLLSKNSRRRLTELYAKRRIPRHTILARLYQRLREHGTFMKRTADCGRHREVRTGQLEEAILDIVFESPETSTRKIANILNVNNFTVFKILKEQHLYQFHIQLVQALLPRVFLPRLAFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -