Vsat134336.1
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- -
- Assembly
- GCA_036346205.1
- Location
- JARFJB010001965.1:9773403-9773771[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-07 3.8e-05 26.9 0.1 3 44 17 57 15 58 0.93
Sequence Information
- Coding Sequence
- atgcctaGAAATTATAATAGGAAAACTGAGAAAGGTTTGTGGAATGCAGAGCACATGGAAGCCGCACTTGCAGCTATCCGAGGGGGTCGAGCTAAACGAGAAGTAAGTAGAGCTTTTGGAATTCCAGAATCTACTCTTCGTGATCGACTAAAAACAGGAAACACTGCAATGCCAAAACTAGGAAGAAATCCCATTTTTACTAAAGAACAAGAGGAAGCATTAGCGGGACGTACTGTAACCTTAGCCAAAATGTTTTTTGGTATAACATTTACAGAAGCGGCGTACGATTTTGCGCAATCCAATGGAATACCACATAAATTTAGTGATACAACTAAATTGGCTGGTAGAGATTGGGCTACATTATTTTAA
- Protein Sequence
- MPRNYNRKTEKGLWNAEHMEAALAAIRGGRAKREVSRAFGIPESTLRDRLKTGNTAMPKLGRNPIFTKEQEEALAGRTVTLAKMFFGITFTEAAYDFAQSNGIPHKFSDTTKLAGRDWATLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01516869; iTF_01516761; iTF_01516763; iTF_01516768;
- 90% Identity
- iTF_01516761; iTF_01516869; iTF_01516763; iTF_01516768;
- 80% Identity
- -