Vsat161518.2
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- TIGD2
- Assembly
- GCA_036346205.1
- Location
- JARFJB010002128.1:543873-545015[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-06 0.00081 22.6 0.1 5 38 4 38 2 43 0.92 2 2 5.6 5.7e+02 3.9 0.1 31 44 88 102 87 103 0.92
Sequence Information
- Coding Sequence
- ATGAAGTCTATGCATTCTGCAGTGAAAGATGTTGTAGAAAATCAAATGACATTGATGAGTGCATCCAAAAAGCATGGTGTAAGCAAGTCAGCTTTACAGCGGAAAGTGAAGAAGTTCAAATTAGCTAATGAAGAAAATACATATGATTTTGAATTCGGACGAAGCCATGGATTCAAACCAATATTTACAAGTAGAGAGGAGCAGCTATTAAGCGAGTATATAATTGAAGCTTGTGAAATGTGTTACGGCTTaacattattaaatactcttGAATTAGCTTACAAGAAACGACACCCTACGTTATCGCTTCGAAAACCAGAAGCAACTAGCCTTGGTAGGGCGACCAGCTTCAACAAGCACAATGTAGCTACATTTTTCAACAACTTGAGAAATGTGATAACGAAACATAATATCCAGCCGAACCAAATATACAATTGTGATGAGACTGGTGTCACCAATGTGCATAAACCCGGGAAGGTACTTGctaacattaaacaaaaacaaattgcaaaagtgACAAGTGCTGAACGAGgcacattaataataatgtgcGCCGCAATATGCGCTAATGGGACTTTTGTGCCTCCATTATTTATATTCCCAAGGAAAGTATTTAAGCCTTTCATGCTTACTGGAGCTCCTCTAGGATCAGACGGTGCAGTTTATCCCTCTAGTTGGATGACAGGCGAAAATTTTGTAAAGTATATAGAGCACTTTATCAAATACGTGCGATGCAGTAAAGAATTTCAAGTTCTACTAATTCTTGATAACCATGAGAGCCGTTACGATGTTCGTGTGCTGAATATGTGTAAAGATAATGGGATTATTTTATTGACATTGCTGCCCCACTGCAGCCATAAATTACAACCGCTGGACGTGAGCTGCTTCTTTCCATTTAAAAGCTATTATAATGAAGGAGTTGATGACTGGATGCTAAATCATCCTGCCGTACCTATGACCATTTatgatgtgtgtagtgttgttGGTATTGCCTACCCTAAAGCATTTACTCCTGTCAATATTCTCAGCGGATTTAAAGCAACAGGCATAGCACCctga
- Protein Sequence
- MKSMHSAVKDVVENQMTLMSASKKHGVSKSALQRKVKKFKLANEENTYDFEFGRSHGFKPIFTSREEQLLSEYIIEACEMCYGLTLLNTLELAYKKRHPTLSLRKPEATSLGRATSFNKHNVATFFNNLRNVITKHNIQPNQIYNCDETGVTNVHKPGKVLANIKQKQIAKVTSAERGTLIIMCAAICANGTFVPPLFIFPRKVFKPFMLTGAPLGSDGAVYPSSWMTGENFVKYIEHFIKYVRCSKEFQVLLILDNHESRYDVRVLNMCKDNGIILLTLLPHCSHKLQPLDVSCFFPFKSYYNEGVDDWMLNHPAVPMTIYDVCSVVGIAYPKAFTPVNILSGFKATGIAP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -