Vsat108055.1
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- clz9
- Assembly
- GCA_036346205.1
- Location
- JARFJB010001727.1:171650-172741[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-07 1.4e-05 28.2 0.0 6 40 20 54 16 57 0.86
Sequence Information
- Coding Sequence
- ATGGTGagaaagtatataaaaaaaaatccaggTCCTTCGTATAGTGCTGAACTTTTAAAAGATGCGCTTAGAAACATCAAACAAAGCGGTATCAGTATTCGTGGTGCTGCCCAGAGGTATAAAATCCCATTTTCTACTCTTCAAAAACACCTACGAGGAACCCGAGGAAGACCTACGGCAATACCTGCAGCTGATGAAGAGAAATTAGTAAATGCCATAAAAACCTTGGAGAAGTGGGGTTGGGGGCTGAGCATAAAGGAAATCGTAGAATTAGTGGGAAAGTatgttacgaaaaataatttaaaaacgccATTTACGGATGGAATCCCGGGCGCAGATTGGTTCTTAGGCTTTAAAGAAAGGCACAGGCTATCTTTAAAAAAACCACAAGGACTTGAGTACGCCAGAAAAAAAGCCAATGATCCCTTTGTAATTGAACaatattttgacatcttaaaagAAACCCTGGAAAGATACGACCTGCAAAATAAGCCTTCTCAGATATATAAGATCGACGAAACTAGTTTTACGCTCGATCCAAGTAAAACTAAAATTGTTGGTCAGAAAAATGCCCCTGCTTCAAGAATAACCACCGGACCCGGTAGAGAAAGTACGACAGTACTCATGGGTGGAAACGCAAATGGGGATAAATTGCCTCCATTAATTGTGTTTAAAGGGAGGAATATATGGGATACTTGGATGGCTCCCTATGAATCTACCGTTCCAGGTAGTACTTATGCTGCATCGCCCAATGGTTGGATGGAAACCGAGATCTACGTaaactattttacaaaaacttttattcCCAACGTTGTACCTGAAAGACCAATCCTGCTTTTGTATGGTGGACATTCAACGCATTTAGATCAGAAACTTATCGAGGCGGCCGTCGAAAATGATATAATTGTACTTAAATTACCACCACACTCCAGCCACCTATTACAGCCCATGGACCTAACGGTCTTTAAAAGTCTTAAGTCACGGTGGGATTCTAAATTAGCGGAGTACCAAAGAAAACATGTGGGTCGTAAAATACCAAAGAAAGATTCTGTACTTGTGAGCACAATTTGGAAAGACACAGATCCAGCTTGA
- Protein Sequence
- MVRKYIKKNPGPSYSAELLKDALRNIKQSGISIRGAAQRYKIPFSTLQKHLRGTRGRPTAIPAADEEKLVNAIKTLEKWGWGLSIKEIVELVGKYVTKNNLKTPFTDGIPGADWFLGFKERHRLSLKKPQGLEYARKKANDPFVIEQYFDILKETLERYDLQNKPSQIYKIDETSFTLDPSKTKIVGQKNAPASRITTGPGRESTTVLMGGNANGDKLPPLIVFKGRNIWDTWMAPYESTVPGSTYAASPNGWMETEIYVNYFTKTFIPNVVPERPILLLYGGHSTHLDQKLIEAAVENDIIVLKLPPHSSHLLQPMDLTVFKSLKSRWDSKLAEYQRKHVGRKIPKKDSVLVSTIWKDTDPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01515944;
- 90% Identity
- iTF_01515944;
- 80% Identity
- -