Vsat103805.1
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- -
- Assembly
- GCA_036346205.1
- Location
- JARFJB010001658.1:2130802-2131449[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-08 3.4e-06 30.2 0.1 6 41 20 55 15 59 0.88
Sequence Information
- Coding Sequence
- ATGGTACGGACATATGTTCGGAAGAATCAGCCTGTTCATTACTCCAAGGAAACTGTAAAAACTGCCGTTGAAGCTGTGAAAAGTCAAGAATTAACGTTATACAGGGCAGCGAAGACTTACAACATCCCTAAATCCACCCTTTTTGAACATGTTAAAGGTCAAAGGGGTACCAAAAGCTCCACCATGGGGAGACCCACTACCATTCCTTATGAGGAAGAACGAAGAATAGCCGAAAGCATAAAGCTCATGGAAAAATGGGGCTTCGGCCTTTCCAAAAAGGAAGTGTTGGCACTAATAGCTCGTTACGTTCAAGAAAATAAGATtccaaattcaattaaaaatggaGTACCAGGCGACGACTActttacacgatttaaaaaaacattcaactTAAGCCAGAAGAAACCACAAATAGTAGAAGTAGCAAGAAAAAGGAGTGTAGATCCATTTATCATTGATGATTATTTTACTCTGCTAAAAGAAGTCGTAAAAGATATTCCGCCAGCAAGAATTTACAACATAGACGAAACCAGTTTTTGCTTAGATCCGAGTAGAATAAAAGTTGTTGGCCAAAGAGGAACAGCTGCTCACTGTGTTAATGGGGGCAAACGCTGTTGGGGAAAAATTACCCACGCATAttgtttttaa
- Protein Sequence
- MVRTYVRKNQPVHYSKETVKTAVEAVKSQELTLYRAAKTYNIPKSTLFEHVKGQRGTKSSTMGRPTTIPYEEERRIAESIKLMEKWGFGLSKKEVLALIARYVQENKIPNSIKNGVPGDDYFTRFKKTFNLSQKKPQIVEVARKRSVDPFIIDDYFTLLKEVVKDIPPARIYNIDETSFCLDPSRIKVVGQRGTAAHCVNGGKRCWGKITHAYCF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00330543;
- 90% Identity
- iTF_01515768;
- 80% Identity
- -