Vsat167207.1
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- -
- Assembly
- GCA_036346205.1
- Location
- JARFJB010002169.1:518095-519390[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-09 5e-07 32.9 0.1 1 38 15 52 15 60 0.86
Sequence Information
- Coding Sequence
- ATGCAacgaaaaggtttaaaaaatactGGCATTGGAAAAACCAGTGAAGAGAGCATGAAAAATGCAGTATATgcagtttttgaaagaggtttttCTACCAAAAGAGCTGCCATTAATTACAATATTCCTCGCACCACCCTAcgaagatatataaaaaaatgtagggAATCCAGAGAAAACATAAATTGGAATAATCCCGATTTAGAAGGTAGTCCACGCATGTGCCCAAATTATACAGTCAGAAAAATTTTTTCTAGTGAAGAGGAGCAGCATTTGTGTAGATATCTGAAAACTATGGCTAATTTACATCACGGTTTGACGCCCAAAAACTCCCGTAAATTGGCCTATGAGTTGGCaattgctaataaaaaaaatattccgaCGCCTTGGAGCGAAAATCAAACTGCGGGAAAAGACTGGTTTACGGGATTTATTAAGAGGAACAAAGACATTGCTGTAAGAACAGCGGAAGCAAGATCTCTGGGAAGGGCTATGGGCTTTAATAAACCAGCGGTTGATAAATTTTTCATAAACTTAAAGGGGCTTatagaaaaatataaactaaatgcCTGTCAAATCTACAACGTCGACGAAACAGCGTTAACGACAGTGCAAAATCCCGGAAAGGTTTTAGCTGCTAAAGGCCAAAGGCAAGTGGGACAGATCACTTCAAGCGAAAGGGGTACACTCGTAACAATGGTGGGAGCTATAAACGCTATGGGAAATACCATTCCTCCATTACTAGTGTTTCCCCGCAAGTATTTCAAACACCATATGATCAAAAATTCGCCACCGGGAACTATTGGAGCGGCTTCTCCGTCCGGCTGGATTACATCCAATATCTTTGCAGAGTGGTTTAATCACTTCATCAATCATGCTAAACCATCTGCGGATGCCCCTGTACTTTTAATAATGGATAACCATGAAAGCCACGTATCGCTAGCAGTTATAGAAAATGCTCGACAAAACCATGTGAAATTACTGACACTCCCGCCGCACACCAGCCACAAACTACAACCGTTGGATAAATGCGTGTATGGTCCTCTGAAAAAATATTATAGCAACGCTTGTCAAACTTGCCTGCTTAATAATCCCGGGAAAAGAATTGTAATTTATGATATCCCTGAGCTTTTAGGGGTTGCATATCCACTGGCATTTTGTGCGAAGAACTGCATATCTGCTTTTAAAGAAACGGGCATTTTCCCCTTCAATAATATGATATTCAATGACGACGATTTTATGGCTTCAAAAGTAACTGACATTCCTGAGATGGACCCCAACTTAAAACTAGTTTAG
- Protein Sequence
- MQRKGLKNTGIGKTSEESMKNAVYAVFERGFSTKRAAINYNIPRTTLRRYIKKCRESRENINWNNPDLEGSPRMCPNYTVRKIFSSEEEQHLCRYLKTMANLHHGLTPKNSRKLAYELAIANKKNIPTPWSENQTAGKDWFTGFIKRNKDIAVRTAEARSLGRAMGFNKPAVDKFFINLKGLIEKYKLNACQIYNVDETALTTVQNPGKVLAAKGQRQVGQITSSERGTLVTMVGAINAMGNTIPPLLVFPRKYFKHHMIKNSPPGTIGAASPSGWITSNIFAEWFNHFINHAKPSADAPVLLIMDNHESHVSLAVIENARQNHVKLLTLPPHTSHKLQPLDKCVYGPLKKYYSNACQTCLLNNPGKRIVIYDIPELLGVAYPLAFCAKNCISAFKETGIFPFNNMIFNDDDFMASKVTDIPEMDPNLKLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01515918; iTF_01516412; iTF_00398795;
- 90% Identity
- iTF_01516412;
- 80% Identity
- -