Vsat053874.1
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- -
- Assembly
- GCA_036346205.1
- Location
- JARFJB010000813.1:1935087-1937210[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-10 5.6e-08 35.9 0.0 1 39 15 53 15 56 0.93
Sequence Information
- Coding Sequence
- ATGCCCAGAAAGTACCAGAAGAAAGGAATTAGGGTTACTTATGACCCCGAACGTATGGCAGAGGCGGTGTCTGCTGTTCGCAGAGGCTTAACATTACGTGTCGCGGCAGAGCGTTATGAAGTGCCATTTGGGACGCTtagtaaacaatataaaaaaacggATGATTTGCAAGTGGGTGGGGGACGAAAGCCTGAACTTAGTGATAAAGATGAAGAAGACATTGCTCAGTACCTAAGAGTGTGCGCACTGCATGGTGAAGGCTTAACTAGGAAAGAAACATTAACACTTGTGTCAGAGTTTATTGAACAAGAGAAAATAGTGACGAGATGGAAAGATGGGAAAGGTCCCGGTGAAGATTGGTTTCGCGGCTTCCTGGCTCGTCATCCACAGCTGACAACCAGAAAAGGTGAAGCTCTCAGCTCACAAAGAGTTAGGGGAACTGATCCTTTCATTATAATACGTTTTTATGACGATATTGCCAAAATGTACGAAGACATGGGCATTGGCCCTAAAGATGGTGGCCTCCTATTTAACTGTGATGAAACTTCGTTTTCTCACGATCCGAAGGATATGAAAATCGTGGCAGAAAAGGGGGTAAAAAGAATTTCAAGAAACATTGCGGAAACGGGGAAAACTAACACAACAGTATTAGCTGCTGGAGCAGCTGATGGGACAAAACTTCCGCCCTTCATTATTTTCACTGGAAAACAGATGTGGTCCACATGGATCCCACAACATGAATACCCTGGTACTTGCTATGCAGTTCAGGAAAAAGGTTGGATGGATGGAAATTTATTTGTCAAGTGGTTTACAGAATTGTTTCTGCCATTCATTCCTCCCAAAGAACAAAGACGAAAGAAGGTTTTCTTATTTTTTGATGGAGTCATCTTTCATATTAGTTACAATCTAGTGAAACTTGCACGAGAAAATGACGTCGTGCTCGTTAAATTTCCACCAAACGTCAGTCATTTCATTCAGCCTCTTGACAAGACAGTTTTCAAGACTATGAAAACAGATTGGAATCAGCTTCTTATTCAGAAAGTTTCCTGGGAAATTGTTGACAATTTGTCCTTCAAGTCCAGGAACCTGAGGTCAGGTTTTGAATCAACAGGACTGTTTCCCATGAACTTTAATAGATTTCCAGAGATAGCTTTTGATCCAATCAAACTAGAAAGATTCAGGAACAATGAAACTAATGATGAGTCTAACCATTCAACCCAAAGACAGTCCTCACATTCTCCACCACCTGTTGCCTCAGCTTCTTCATCTCCAATAATTTCCGAAGATGTTCCTGGTCCTAGTCATAGGCTTACTGCAGCTGAAGAAGCTCATTTGAAAGACCAGGAAACGGAAAAACAAGCGGCAAGTGCTTCTGAAACTAAAGAGAGGAAAGAAACAGGCAAGTCCAGGTTTGAATTCTTTATCAGGAAACAACTTTCTGAAACTGTTTCCGAAGTTGCAAAAACCTCGACACTTACGGGAAAACGAAAGAAAGTGTCGCAAGGTGTCGGGGAAATTCTGACATCTGAAATAGTTGCACAGCGCCTGAAAGACGAAGTAGAAGCAAAGAAGGCCAAAATTTCCACAAAAACAAAGGCAAAGGAAGATAAGAAGAGAAaggacaaaaagaaaacaaaggagaATAACTGCAAAAAGAAAGTCATAGCCAAAAAAAGGGCAGTTCCCGAAGAATTATCAACATCAGAGGACGAGCTTGACCCAAAATTGTTGGAATCCGATGATGCTTCAGATGACTGGAGTGATATGGATGACTGTACCTTGAGCAATCTCCGTGACCATCAGGGACTTAGTGATCCTGATGAGTCAGCAAACCAACTCACTTTAGAAGCTGAAAAATACTTTGCCGTTTATTATGACGTCAGTTGGTATCTGGGTCGAATAATTTCCATAGCCGAAGACACTTGTGTAGTTAAGTTTCTGAAAGAAAATCTTGAAACGTTTGATTGGCCGCCTCACGAGGACAAACAAGTGGTAAAAAAGGATTACGCAGTCTACGGCTCTATTCAGTTAAAAGGCAGTGGACCCTTCACTCTAACAAGGGGTGAttatatagaaattaaaaaagcctattctttaatgaaaaagaaatatttgtcCTCGTAA
- Protein Sequence
- MPRKYQKKGIRVTYDPERMAEAVSAVRRGLTLRVAAERYEVPFGTLSKQYKKTDDLQVGGGRKPELSDKDEEDIAQYLRVCALHGEGLTRKETLTLVSEFIEQEKIVTRWKDGKGPGEDWFRGFLARHPQLTTRKGEALSSQRVRGTDPFIIIRFYDDIAKMYEDMGIGPKDGGLLFNCDETSFSHDPKDMKIVAEKGVKRISRNIAETGKTNTTVLAAGAADGTKLPPFIIFTGKQMWSTWIPQHEYPGTCYAVQEKGWMDGNLFVKWFTELFLPFIPPKEQRRKKVFLFFDGVIFHISYNLVKLARENDVVLVKFPPNVSHFIQPLDKTVFKTMKTDWNQLLIQKVSWEIVDNLSFKSRNLRSGFESTGLFPMNFNRFPEIAFDPIKLERFRNNETNDESNHSTQRQSSHSPPPVASASSSPIISEDVPGPSHRLTAAEEAHLKDQETEKQAASASETKERKETGKSRFEFFIRKQLSETVSEVAKTSTLTGKRKKVSQGVGEILTSEIVAQRLKDEVEAKKAKISTKTKAKEDKKRKDKKKTKENNCKKKVIAKKRAVPEELSTSEDELDPKLLESDDASDDWSDMDDCTLSNLRDHQGLSDPDESANQLTLEAEKYFAVYYDVSWYLGRIISIAEDTCVVKFLKENLETFDWPPHEDKQVVKKDYAVYGSIQLKGSGPFTLTRGDYIEIKKAYSLMKKKYLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065779; iTF_00065782; iTF_00065785; iTF_00065786; iTF_00065788; iTF_00065789; iTF_00065790; iTF_00066963;
- 90% Identity
- iTF_00065629;
- 80% Identity
- -