Vsat122517.1
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- -
- Assembly
- GCA_036346205.1
- Location
- JARFJB010001904.1:95973-97798[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.7e-11 7.9e-09 38.6 0.0 3 39 17 53 16 57 0.95
Sequence Information
- Coding Sequence
- ATGGTGTTTACCTACAAAAGGAAGACGGATCGTCAAAAGTGGCCAACCGAGAGCATGCAACAGGCTGTAAATGCTGTAGTAAGTGGTGAGATGGGTTACTATCGAGCATCGATTTCATTTGGCGTTCCTCAGACAACTTTAGAGCGTCACGTAAAAGAACAACGACATAATGCAGGGTATTCTGTTGCAAAAGTTTTACGCGCTAAAAGGTCTGTTTTTACTCCCGAACAAGAAGTTGAACTTGTTAATTATCTTAAAGGTATGGAAGCAAGATTGTTTGGATTGACTCTGACAGAATGTAGGCAACTTGCCTTTCAACTTGCTGATCAAAAGCGGATTGAGCATCCCTTTAACCAAGATCGCAAAATGGCTGGGCAGGGATGGATGCAGGGGTTTTTGAATAGGCACAAGAACTTGTCAATCAGAAAGCCCGAGGCTACGTCAGGTGCCCGTGCGATGGGATTTAACAAGGTGGCTGTACCACAATTCTTTAAACTGTTGGAAGAAACTGTCCAGAAATATAAACTAACAGCAGAAAAAATCTACAACGTGGGCGAAACGGGAGTTACGGTCAATCCAAAGGGGGCTTCTAAAATTATAGCCTCAAAAGGAAAGCGCCAAGTTGGTGCGCTTGCGTCAGCCGAGAGGGGTGAAACTGTCACTGCAGAAATTTGTTTCTCTGCCTCAGGGGCGTATATGCTTCCCATGTTAATATTTCCCCGGAAGCGAAAGCAACAGGGGTTTTTGGATGGTCTCGTGCCTGGTGGATGGGTTGAACTTAATGAAAAAGGGTGGATAGATaagattttgtttttttcatggTTTAAGAAGTTTGTCGAGTATTCTAGAGCTTCAAAAGATTCACCAGTTCTGCTTCTGCTAGACGGTCATTCGTCACATACGAAAAATCTAGACGTAATTAATTATGCTAGGGAAAATGGGGTGCAAATGATATGTTTTCCACCCCATTGCACACACCGTCTTCAAGCCTTAGATGTTGCATTTATGAAGCCACtaagtgcatattatgacgaCGAAGTAAGGAAATGGCTTAGAACAAATCCTGGACGAGTAGTAACATTTCAGCAAATTTCCTGCCTATTCAGTGCCGCATATTTAAGAGCAGCTACAATGGTTACTGCCATAAATGGTTTTAAAGCAACCGGCGTGTGGCCTGTGGATATGGCCGTTTTTTCTGAAGCAGATTTCTTGCCATCAGCTACAACTGATATAGAAGTTGGTCCCAGTGGAGCTGAAAGGTCGTCTATTAGAGAAAAGACGCCTGAGCCTCAACCAGGACCATCGATTAGAAAGGAGATGCCTGAGCCTCAACCAGGATCGTCCAAAGAAAGTGACACTAGTTTTGAGTTTGTAAGTCCCGAAGCGATCTTAGCAGTGCCTAAAGTAAATCAATCCAAGAAACGAGTGTCAAGAAAAAGGGGCAAAACTGTCATTTTAACGTCTTCACCCTATAAAACGGAGCTGGAATTGGCTGAAGAAAAAAAGCAGGCTATCAAGGTGAAATCAGTGAAAAGAAAGATATCCGATAATAAAACCAAATCTCAGACGATTAAGAAATCAAAATTGACAAAAACTAAAGAAGTAGAGTCCGATTCAGAAGGCGAAGATAGTGACACTGACTGCTTGTACTGCGGATACTTTTATTTGAGTTCCACAGAGGGATGGATAAGCTGTTCTCGTTGCCATAAATGGGCTCACAATTCATGTGCGGGTGTAGAAGATGAAGATAATGAAGCAGTACTTGTTTGCGAACTTTGTCAATAG
- Protein Sequence
- MVFTYKRKTDRQKWPTESMQQAVNAVVSGEMGYYRASISFGVPQTTLERHVKEQRHNAGYSVAKVLRAKRSVFTPEQEVELVNYLKGMEARLFGLTLTECRQLAFQLADQKRIEHPFNQDRKMAGQGWMQGFLNRHKNLSIRKPEATSGARAMGFNKVAVPQFFKLLEETVQKYKLTAEKIYNVGETGVTVNPKGASKIIASKGKRQVGALASAERGETVTAEICFSASGAYMLPMLIFPRKRKQQGFLDGLVPGGWVELNEKGWIDKILFFSWFKKFVEYSRASKDSPVLLLLDGHSSHTKNLDVINYARENGVQMICFPPHCTHRLQALDVAFMKPLSAYYDDEVRKWLRTNPGRVVTFQQISCLFSAAYLRAATMVTAINGFKATGVWPVDMAVFSEADFLPSATTDIEVGPSGAERSSIREKTPEPQPGPSIRKEMPEPQPGSSKESDTSFEFVSPEAILAVPKVNQSKKRVSRKRGKTVILTSSPYKTELELAEEKKQAIKVKSVKRKISDNKTKSQTIKKSKLTKTKEVESDSEGEDSDTDCLYCGYFYLSSTEGWISCSRCHKWAHNSCAGVEDEDNEAVLVCELCQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01226628; iTF_01226629; iTF_01226630; iTF_01226631; iTF_01226632; iTF_01226633; iTF_01226634; iTF_01284260; iTF_01284261; iTF_01284262; iTF_01284263; iTF_01284264; iTF_01284233; iTF_01284265; iTF_01284266; iTF_01515621; iTF_01516170; iTF_01516413;
- 90% Identity
- -
- 80% Identity
- -