Vsat012844.1
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- clz9
- Assembly
- GCA_036346205.1
- Location
- JARFJB010000166.1:188762-190548[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-11 2.5e-09 40.2 0.0 1 44 10 52 10 53 0.88
Sequence Information
- Coding Sequence
- atgGTTGACAAGAAGGTTCAAAAATACTCAAACGAGACATTAAAAGCAGCTCTTGATGCTATTCAAAATGGTCTAAGTCTCCGAAAAGCATCTACTCAGTTTAGCATTCCCAAAACTACCCTTATTGACCATAGGAGTAATAGATACAAGACAAGTAATATTGGTGCTCCCACAGTACTTTCGGCTGACGAGGAAAATGTTCTTGTTGATTGGATTATGAAGATGGGTGCGATGGGATTTCCTGTTACCAAACTGCAGTTAATAGAATCGGTGGATTGCAAAAGAATACCACAATCCTTAACTCAAACAAGAGCAGGTATCACCGAGGAAGCAATTAGAAGTTGGTTTTCGCGTGTTCAGTCTTATTTAACTGATAATAACTTAACTGACATTTTAAATGACCCTAGACGAGTTTTTAACTCAGATGAATCGGGATTTCTTCTAGCACCTAAAGACAAGGAAGTTCTCGTTAAGAAGGGTTCTAAGAAAGTATATTTTCGCACGACTAATGATGAAAAAGAATGTATAACAGTGTTACTTACTATTTGCGCTGACGGTAGTTGGCAACCTCCCCTTGTATTATTTCCTTACAAGAAAAGAGTACCTAATGGAATTATTCACAAAATGCCTCGTAAGTGGGGGGTTGGCCGATCGGAATCCGGATGGATGACTAGCGAGAACTTTTTTGAATATGTTACAAATGTTTTCTACCCTTGGCTTTTAGAAAATAATGTTCCTCTGcctataatatattatttagatgGTCACTCATCCCACATAAATCTGCCTCTTACAGAATTTTGTAAGGAGAAGGGAATAATCCTTACCGCGCTATTACCCAATTCAACCCACAGATTGCAACCTTTGGATGTTGGGCTGTTTTCTCCCCTGAAAGGTGCTTGGAAAAACATTGTAAGAGAATGGCGTATGAATAACAATGGATCAAAACTAGAAAGGGAAGACTTTAGTTCCTTAATCCACAAATGCCTAATTGAAACGGCAACTcctaaaaatatacagagtgcctTTCACTCATGTGGGCTCTATCCGTTTAATCCGAACAATATTGATTACTCTAAATTGGTGCAGCCACTACCCAGTGCAGAAAAAATTGACACAAACCCAGGCACTCATGAACcaataaaatttacagaattCCGCTCAATGGTAGAAAACAATATAGATCCAAGTGTTTTATCCAGATTTAAACTTTGCCAAGGTCTTTGGGATGGAGAGCTTGAGTACAAAGGTTTATATGAGTTTTGGACAAATTTAGGAACAAAAAATGTAACTCAACTGCCTCCTGAGTCGCAAGTTGAAAATAACCATGATATAACATTGGAAAATAATGGTATTGtacaaaatgattttattacATCTAACTCCTCATTTGAGGTAACATTAGATGATACGATTTGGTTGGAAAATAGCGGTATTATTGAGGCGGTTGTTGAACCTGATGGTAGTCTCTCTATCAACAGTAAGGAAAACTCTAAGTTTGCTGATACCGATTTCCAACAGAAAAATGCTCCAAGTATAAATATTTCTGCAGCAATAGATCAAAATACCAGACTGCGTAATTCTGAACAAGGAGAAAATATTCCTTCAAAagaaattagtaataataataatcattttctgcaAAAAACGTTTTTAGAACAAATGCAAATGGTAACGATAATGCTTGTTTGA
- Protein Sequence
- MVDKKVQKYSNETLKAALDAIQNGLSLRKASTQFSIPKTTLIDHRSNRYKTSNIGAPTVLSADEENVLVDWIMKMGAMGFPVTKLQLIESVDCKRIPQSLTQTRAGITEEAIRSWFSRVQSYLTDNNLTDILNDPRRVFNSDESGFLLAPKDKEVLVKKGSKKVYFRTTNDEKECITVLLTICADGSWQPPLVLFPYKKRVPNGIIHKMPRKWGVGRSESGWMTSENFFEYVTNVFYPWLLENNVPLPIIYYLDGHSSHINLPLTEFCKEKGIILTALLPNSTHRLQPLDVGLFSPLKGAWKNIVREWRMNNNGSKLEREDFSSLIHKCLIETATPKNIQSAFHSCGLYPFNPNNIDYSKLVQPLPSAEKIDTNPGTHEPIKFTEFRSMVENNIDPSVLSRFKLCQGLWDGELEYKGLYEFWTNLGTKNVTQLPPESQVENNHDITLENNGIVQNDFITSNSSFEVTLDDTIWLENSGIIEAVVEPDGSLSINSKENSKFADTDFQQKNAPSINISAAIDQNTRLRNSEQGENIPSKEISNNNNHFLQKTFLEQMQMVTIMLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01515586;
- 90% Identity
- iTF_01515586;
- 80% Identity
- -