Vsat051376.1
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- -
- Assembly
- GCA_036346205.1
- Location
- JARFJB010000786.1:719842-720144[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.1e-13 6.2e-11 45.4 0.1 2 40 11 48 10 53 0.91
Sequence Information
- Coding Sequence
- atgccTTTCAAAAAAAGAGCTCAATGGGCAGAGGAAGATTTAGTAGCTGCAATAAACGCCGTTAGAGGCGGTATGGCTACTAATAGAGCAGCTATTACTTTTAATATCCCTAGGCGAACTTTACGAAACCACATAAAGAGGGGAAGTTTAAAAAAGAAGCTTGGTCACCATCCAATTTTGTCTGCAGTTCAAGAAACAGAATTACCTAGGAGAATAGGACGCTTGTGCGAGATAGCGGTAAACCCCATCCAAATTTACAATATGGATGAGAAGGGATGCCAATTGACTCTTCACCATCAGTAA
- Protein Sequence
- MPFKKRAQWAEEDLVAAINAVRGGMATNRAAITFNIPRRTLRNHIKRGSLKKKLGHHPILSAVQETELPRRIGRLCEIAVNPIQIYNMDEKGCQLTLHHQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01515486;
- 90% Identity
- -
- 80% Identity
- -