Basic Information

Insect: Vespula vulgaris
Gene Symbol: stc
Assembly: GCA_905475345.1
Location: FR997672.1:4142513-4151165[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.2e+04 -4.3 1.6 15 19 488 492 487 492 0.81

2 14 0.079 4.8e+02 0.4 0.4 4 10 521 527 520 527 0.95

3 14 4.6e-06 0.028 13.9 12.7 4 18 538 552 536 553 0.95

4 14 3.8e-08 0.00023 20.6 17.8 1 18 589 606 589 607 0.98

5 14 1.5 9.1e+03 -3.7 0.8 6 10 635 639 634 639 0.87

6 14 2.8e-07 0.0017 17.8 14.3 1 18 645 662 645 663 0.98

7 14 0.32 1.9e+03 -1.6 1.3 5 10 692 697 692 697 0.96

8 14 1.8e-05 0.11 12.0 12.9 4 18 710 724 703 725 0.86

9 14 1.5 9e+03 -3.7 2.0 5 10 754 759 754 759 0.93

10 14 0.014 85 2.8 11.4 1 11 765 775 765 787 0.88

11 14 6.7e-11 4e-07 29.4 14.0 1 19 792 810 792 810 0.98

12 14 2 1.2e+04 -5.9 9.2 10 19 857 867 849 867 0.79

13 14 1.7e-06 0.01 15.3 15.4 1 16 903 918 903 929 0.87

14 14 7.6e-06 0.045 13.2 13.6 1 19 935 954 935 954 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.2e+04	-4.3	1.6	15	19	488	492	487	492	0.81
2	14	0.079	4.8e+02	0.4	0.4	4	10	521	527	520	527	0.95
3	14	4.6e-06	0.028	13.9	12.7	4	18	538	552	536	553	0.95
4	14	3.8e-08	0.00023	20.6	17.8	1	18	589	606	589	607	0.98
5	14	1.5	9.1e+03	-3.7	0.8	6	10	635	639	634	639	0.87
6	14	2.8e-07	0.0017	17.8	14.3	1	18	645	662	645	663	0.98
7	14	0.32	1.9e+03	-1.6	1.3	5	10	692	697	692	697	0.96
8	14	1.8e-05	0.11	12.0	12.9	4	18	710	724	703	725	0.86
9	14	1.5	9e+03	-3.7	2.0	5	10	754	759	754	759	0.93
10	14	0.014	85	2.8	11.4	1	11	765	775	765	787	0.88
11	14	6.7e-11	4e-07	29.4	14.0	1	19	792	810	792	810	0.98
12	14	2	1.2e+04	-5.9	9.2	10	19	857	867	849	867	0.79
13	14	1.7e-06	0.01	15.3	15.4	1	16	903	918	903	929	0.87
14	14	7.6e-06	0.045	13.2	13.6	1	19	935	954	935	954	0.97

Sequence Information

Coding Sequence: ATGGCCACTTGGGATGGCTCATGTCACGAACCTGAAGATTCAAATTATTTTTTTTATTCGGGTCAAAATAGTGCCATCCCTAATGTAGAAAGTTGGACTTTTTATCCCAGTAATGGGAGCAACGTTTTTTTTCATAGTACTCATGCACCATATTCGCAAAATACTTCAATGATGTTGGGACAAAGTGAACATATTGCTTCCTGTCAAACGGATGCTAACTTTTCATCAGGTTCTCTAAATTCATTGCCTTTAAGAGACACTTGCCCAGATTACTTAAATGCTCCAGGCAGCACACAAGACTGTCAAGGTAACAGTAGGTCACAGAACATGTCAACATATTATTATCAAAGCAATCGACAAGGGAAACGAATTAAAAATTATAAAGATAACAATAAATATGAATTTCCAAAAGAAGTTAGTCGCAACAATTGTAGCATTGTTGAACATTCCAATTTACATCCTACTGCGAGTGAATTTGTGCCACATGGAATTAAACATTATGCCAATCAAGCAAATACAAATCTACATGTTTCTAATTCAGAAGATTCTAAACCAAATTTGGCACAAGAAACATATGTTTCTGATAATGGTGGTAAATATAAAAAGAAATATAATACAAAAAAAAATAATTCATACAAATATAAAGAAATGCCAGAATATAACTTTCGGCAAAGAAATTCATTTCAAAATTCCTATAAAACACATGGTAGAAATTATAGAAAGTATCAAAATACTTCTGAAGAACCAGCAAGTATGTCTAATCATCATAGAAATAATTCAACTACTGATGAAACTCAGAAGAACGAAAAATTTATGAATATTAATACAAACATCAATGCCAATAAAACTAATGCATCTAACATCGAAGAGAAACAGGAAATCAATGATCAAGCAAGAGCTAACAAAGAAAATACTGATGCCAGCAGCACTATAAGTCAAAACTGTGATCACTCGAGTAAAAATAATTACCAACGACATAATTCTAATTTTGGAACACAACGTATTCCTGCTAAATATGGTAGAAAAGTTACCAATGATCGCAAGATTGGTAGATATGATAATAATTATCGTGAGAGAAAAAATAACTATCAGGAATATAATAATTATAAGGAAAGATATGAAGAAAGCAAAATAGATATTACTAAGGATAAGTATAAAAACAAAGATGTGACTCAAGAAACTAAAGAAGTAGAGATAGTGAATTGGAGACAAAAGGGAGAAGGTAATGATAGAAATAGTATTTCAAAACGAAAACAGAATAAAAAACATGAAGATGATGATGCAAGTCAAAGGGAAAGATTAACAGATCAATTAAATAGAGGACAATTAGAATGTTTAGTATGCTGTGAATATATAAAACAAAATGATTATATCTGGTCTTGCTCAAATTGTTATCATGTTTTACATTTGAAATGTATAAAAAAGTGGGCAAAATCTTCCCAAGCAGAAAATGGTTGGAGATGTCCTGCATGCCAAAATGTAAGCACAACAATTCCCGAAGAATATTTTTGTTTTTGTGGAAAAACAAATATGCCTGAATGGAATCGCAGAGACATGGCTCATTCGTGTGGTGAAGTTTGTGGAAGATCTCGTATAAAAAATAACTGCCCTCATAAATGTACTTTGCTATGTCATCCTGGATCTTGTCCATCATGTATAGCAATGGTAACAAAAAATTGTGGTTGTGGTAAAACATCACAAACGTTACAATGTTGTGCATTAACATTATTGCTATGTGATTCTGTTTGTGGTAAAATCTTAAATTGTGGAAAGCATACATGTGAAAAGAAATGTCATCATGGGGAATGTGAGCCCTGTGATAAAATTATACAACAAGAATGTTATTGTGGGAAAAGTAAAAGAGATGTAATTTGTCAATCTAACATATCTTCAACATATTCGTGTGAAGATACTTGTGAAAAGTTGTTAGATTGTGGAAATCATAAATGCAAAAAAACTTGTCATCCAAATTCATGTGAGCCTTGTGCACTTACACCTGAAAAAATCACAACATGTTATTGTGGACGAACACCACTGTCAGACAAAAGAACGACTTGTTTAGATCCAATTCCAACTTGTGAAGAAATATGTTCTAAAAGACTTAACTGTGGTCAGCCTAGTAATCCACATACATGTAAGATAAAGTGTCATCAAGGAGATTGTCCTGAATGTGATTTAACAACAGATGTAAAATGTCGTTGTGGTAATATGGATAGAGAAATCCCATGTAAAGATTTAACAACTAAAGCAGATGATGCACGTTGCGAAAAAAAATGTATCAAAAAAAGATCTTGTGGGAAACATAAGTGTAATCAAATGTGTTGTATTGATCTCGAGCATATTTGTCCTTTACCTTGTTCTAAAACATTAAGTTGTGGTAGACATAAATGTGAACAAACTTGTCATAAAGGTAGGTGTCAACCTTGCTGGCGCAGTAGTTTCGACGAATTATATTGTGAATGTGGTACAGCTGTAATATATCCTCCTGTACCCTGTGGAACTAGAAGACCCGTTTGTGATAGACCTTGTTCGCGTGACCATTCTTGTGGTCATGAAGTATTTCATAATTGCCACAGTGAACCATCATGTCCTCCATGTACTTATCTTACTGAAAAATGGTGTTATGGCAAACATGAACTTAGAAAAGCTGTCCCATGTTATTTTAATGAAATTTCATGTGGCTTATTGTGCAATAAACCTTTATCATGTGGAAGACATAAATGTATAACTATATGCCACCCTGGGCCATGTGAAAAGCCAGGACAGCAATGTGTTCAACCATGTAATATATTAAGAGAATTATGTGGGCACATATGTGCTGCTCCGTGTCACGAGGGAAAATGTCCTGATACACCTTGTAAAGAAATGGTCAAAGTAACGTGCCAATGTGGACATAGAAGTACAACTAGAGTATGTGCAGAAAATTCTAGAGAATATCAAAGAATAACTAGCAATATTTTAGCTAGTAAAATGGCTGATATGCAACTTGGTCATTCTGTTGATTTAGAAGAACTTTTTGGACCAGGAGCAAAGAAACAAAATCAACTAAAAATACTCGAATGTAGCGACGAATGTAAATTAATAGAACGAAATAGAAGATTAGCATTAGGACTTCAAATTGTTAATCCGGATTTAAGCGGAAAATTAATGCCAAGATACACTGACTATATGAAGCAGTGGGCAAAAAAAGATCCTCATTTTTGTCAAATGGTGCATGAAAAACTAACGGAATTAGTTCAACTCGCAAAGACTTCTAAACAAAAGTCAAGAAGTTATTCATTTGATAGTATGAATAGAGATAAACGTCGCTTTATTCATGAATCTTGTGAACATTTTGGCTGTGAAAGTCAAGCATATGATCTAGAGCCAAAAAGAAACGTTGTTGCTACTGCTGTAAAAGATAAGTGTTGGCTACCAAGTTATAGTTTATTAGAAATTGTGCAAAGAAACAATGGACAAAGAAAAGTACCAGGTCCAATATTGAATACTTCTAAAGCTAACAATTCAACAAAGACAATCTTAGCATTACCTATAACAAGAAGTCAGCAAATTGTACCAACTCCATCAACTTCAAAATCGCCAGAACCAGAAATAGATTATTTTGATTATAAAGGTTAA
Protein Sequence: MATWDGSCHEPEDSNYFFYSGQNSAIPNVESWTFYPSNGSNVFFHSTHAPYSQNTSMMLGQSEHIASCQTDANFSSGSLNSLPLRDTCPDYLNAPGSTQDCQGNSRSQNMSTYYYQSNRQGKRIKNYKDNNKYEFPKEVSRNNCSIVEHSNLHPTASEFVPHGIKHYANQANTNLHVSNSEDSKPNLAQETYVSDNGGKYKKKYNTKKNNSYKYKEMPEYNFRQRNSFQNSYKTHGRNYRKYQNTSEEPASMSNHHRNNSTTDETQKNEKFMNINTNINANKTNASNIEEKQEINDQARANKENTDASSTISQNCDHSSKNNYQRHNSNFGTQRIPAKYGRKVTNDRKIGRYDNNYRERKNNYQEYNNYKERYEESKIDITKDKYKNKDVTQETKEVEIVNWRQKGEGNDRNSISKRKQNKKHEDDDASQRERLTDQLNRGQLECLVCCEYIKQNDYIWSCSNCYHVLHLKCIKKWAKSSQAENGWRCPACQNVSTTIPEEYFCFCGKTNMPEWNRRDMAHSCGEVCGRSRIKNNCPHKCTLLCHPGSCPSCIAMVTKNCGCGKTSQTLQCCALTLLLCDSVCGKILNCGKHTCEKKCHHGECEPCDKIIQQECYCGKSKRDVICQSNISSTYSCEDTCEKLLDCGNHKCKKTCHPNSCEPCALTPEKITTCYCGRTPLSDKRTTCLDPIPTCEEICSKRLNCGQPSNPHTCKIKCHQGDCPECDLTTDVKCRCGNMDREIPCKDLTTKADDARCEKKCIKKRSCGKHKCNQMCCIDLEHICPLPCSKTLSCGRHKCEQTCHKGRCQPCWRSSFDELYCECGTAVIYPPVPCGTRRPVCDRPCSRDHSCGHEVFHNCHSEPSCPPCTYLTEKWCYGKHELRKAVPCYFNEISCGLLCNKPLSCGRHKCITICHPGPCEKPGQQCVQPCNILRELCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRSTTRVCAENSREYQRITSNILASKMADMQLGHSVDLEELFGPGAKKQNQLKILECSDECKLIERNRRLALGLQIVNPDLSGKLMPRYTDYMKQWAKKDPHFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNRDKRRFIHESCEHFGCESQAYDLEPKRNVVATAVKDKCWLPSYSLLEIVQRNNGQRKVPGPILNTSKANNSTKTILALPITRSQQIVPTPSTSKSPEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01235401;
90% Identity: iTF_01513155;
80% Identity: -