Basic Information

Insect: Vespula vulgaris
Gene Symbol: -
Assembly: GCA_905475345.1
Location: FR997683.1:3956496-3967809[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.21 13 5.9 7.5 1 23 113 136 113 136 0.93

2 16 0.001 0.063 13.2 1.9 1 23 528 551 528 551 0.97

3 16 1.2 74 3.6 0.2 5 23 558 577 557 577 0.91

4 16 0.19 12 6.1 6.9 2 23 583 604 582 604 0.95

5 16 1.4e-05 0.00089 19.0 0.6 1 22 780 801 780 801 0.97

6 16 9.2e-05 0.0058 16.5 0.7 3 23 810 831 809 831 0.97

7 16 0.035 2.2 8.4 3.4 2 23 842 864 841 864 0.91

8 16 0.079 5 7.2 0.2 3 20 894 911 892 913 0.91

9 16 2.3 1.5e+02 2.6 4.6 1 23 920 943 920 943 0.89

10 16 0.0013 0.084 12.8 3.8 1 23 953 976 953 976 0.95

11 16 0.17 11 6.2 0.1 1 20 1003 1022 1003 1024 0.93

12 16 0.25 16 5.7 3.1 1 23 1031 1054 1031 1054 0.94

13 16 1.5 96 3.2 2.8 1 23 1063 1086 1063 1086 0.89

14 16 0.88 56 3.9 0.1 2 20 1142 1160 1141 1162 0.93

15 16 4.1e-05 0.0026 17.6 1.0 1 23 1169 1191 1169 1191 0.97

16 16 0.0002 0.013 15.4 0.9 1 23 1201 1224 1201 1224 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.21	13	5.9	7.5	1	23	113	136	113	136	0.93
2	16	0.001	0.063	13.2	1.9	1	23	528	551	528	551	0.97
3	16	1.2	74	3.6	0.2	5	23	558	577	557	577	0.91
4	16	0.19	12	6.1	6.9	2	23	583	604	582	604	0.95
5	16	1.4e-05	0.00089	19.0	0.6	1	22	780	801	780	801	0.97
6	16	9.2e-05	0.0058	16.5	0.7	3	23	810	831	809	831	0.97
7	16	0.035	2.2	8.4	3.4	2	23	842	864	841	864	0.91
8	16	0.079	5	7.2	0.2	3	20	894	911	892	913	0.91
9	16	2.3	1.5e+02	2.6	4.6	1	23	920	943	920	943	0.89
10	16	0.0013	0.084	12.8	3.8	1	23	953	976	953	976	0.95
11	16	0.17	11	6.2	0.1	1	20	1003	1022	1003	1024	0.93
12	16	0.25	16	5.7	3.1	1	23	1031	1054	1031	1054	0.94
13	16	1.5	96	3.2	2.8	1	23	1063	1086	1063	1086	0.89
14	16	0.88	56	3.9	0.1	2	20	1142	1160	1141	1162	0.93
15	16	4.1e-05	0.0026	17.6	1.0	1	23	1169	1191	1169	1191	0.97
16	16	0.0002	0.013	15.4	0.9	1	23	1201	1224	1201	1224	0.93

Sequence Information

Coding Sequence: ATGAGTCATGTGGAAACTGAAGATAGAAAGTATATTCAGCAGGAGAAAGATTCCTTTGTAATTGACAAAAATGGTAAAAACAGGAAAAGATTAGTAAAACATAACGATATTAAAACATCCAGTAAAAAACAAGGCAGAGATATATCAGCAACAATGGGAAAGAAGAGCATTGTTTATTGCGAAATATGTTCTTTGCCTTACGACAGTTTGAATCGGTTAAAATTTCATAAATCTTCCTATACCAGGAATAGTAATTATTTTTGTTCCAGTTGCTTCTCGCATTCTTGCTCTCATATGAGACTAAAGATTAGTAATAAGATGTCAAAATCTTCTAGATATCGTTGTCATTTTTGCAAACGACTGTTTAGCAAGAAAAAAAAGTTACAAGGTCATTTATTTCACGTTCATGGTAAAGAAATAGGTATAAATGTTGAAGGTGATTCATTTTCAATAAAGCATTCTGCAACTGTTTCATATTCTGGTGTATTAAGGAAGAAGCGAATGCGGCAGAAGACAATGATGGAATACATCGTACGTCCTAATGAAGAAGATGCAAAAAATACATCTGAAAATTTGAACAACTCGAACGATAGTAGCGCGTTAACAATAATTAAACAGGAGGTTGAATGGATGGATGATCAAGTGAATGATCAATCGTCGACGGATAAAATAGTCTCTACTATATCTCGAACGAGTCAGGAGTTAAATGAAAATAAGATACGAGATCAGCCATTTGTTAAAATACACGTCGATTCGAACATGATGAAAGCTCTTTTAGGAATTTCTAATGGCGACGACTGTCTCGAACAATCTTTCCTATATAGTAGTAATATTAATAGTGATAGTATTACTAATAGTAGTAATAGTAAGCCTTACGCATTGCGATCTTTAAATAATTCTATAACAGTAAATAATAGTAAACCATCCATGATCGTACGTGAAAATAATCGAAGCGGTAGCAAGGTAAGAAGACTTTTAAGTATGTGTAAAAAATGTACCATTTTGTTGGTAAGATACGACGATAAATTGCTTACCAGATTGACTTCGAATTCTTCGAAATTTACTACGTCATCTTCTCAGGTTTTAAAACCAGTTAAACGTAAATTGCGTAAACGTAGATTACCGCATCGAAAAAGTAAGAATAACGAATTATCTTCCAAGAATCGTTTTCCACTAATTAATGTTACGAACAAGTCTTCTGTAAGATCTCCGCCTGTAAAAATTAGAAAACGAATTGCTAAGAGTAAAGCAAACTTATCTATCGCGTTAAATTTTAAGCGTTCTACCGAGTTTAAACAGACTCGCAAGAAGCGTTCTGATCCGCCTCGATCGTTGCTCAAACGATTCCTTCTCGATCTAAGAAAGAACGAATCTTCAAAGAAAGCAAACATTACGAATCGTAAAAACTCATCGTCTCGGAAGAAATCGGTTTCAACGGAATTTCAAAATAAACGCTCCGCGAATGCTATTGCTGGATTGAAGGAAGTGAAGGTATCTTTGGTAAAGTTGCCAGAAATTAAAAAGGAATTGATCGTGCCGGAAGTGGATGAAAATGCAACGATTGGCAGCAGAGATGAAACATTTCCTTGTACAATTTGTAAGACGTCACTGATCTCGGAGAAACGTTTGAAAAAACACATGAAGAAATATCATACAGCATACATATCAAGCATATGCCGAGCACGATATGCGTCGAAACGTCTTTTATTGAAACATTACTTACAAGAACACGACATGTGGGTATGCAAATGTTGCGTTTGTTATCAATTCTTCAATAGTCGATTATCATTGAAACGACATTTGCTTCTACATTGTATCAAAATAACGTTATCGAAATACGATCGTCCTCTTTCGAGTAAAACTATAAAATGTCATTTGAATACAAAAAGATACAAGTGCAAGAGAAGCGCTTTAAAGATCATGCTGCAATCGCAATCGACGGAACGTCGAGAGATCGACGTTATTAATCGGAAAAAACCAAAGGAAAATTTAAATATAAGTAGAATAGAGAATCTGACAAATCAGGTTAGCGAAAGCAAAGAGAATAATGACGATGTTCTTGGAAAAGTATATGATCGGCTAGGACATCAGACAGTCTTTGTTGAAATAACGAGCCCATTCAAAAGTAATAATACCGAAGTTTCTCCTTCTAGAAGTAATGACTTGATGGAAGAACCAATACTGGATGCTTCGTACACTGCCAACGAATCTATCATTTATAATTCTAACGAGTATGGGCAAATTGAATTGATACCGCATACGAATGTGATACAATCGGGTGTTAGCGATAATAATCAGTCTGGACCGAACATAGAAACTATAGTAAATAATCGGAAATATCCATGTTCGGTTTGTGGGAAACAGTTTCAAAAACAAGGAAGTTTATTCAAACACCAACGTACCTACGCTCGATCGTACAATAATTTCTGTGAAATTTGCGGACTACTCTTTTCATCGAAGAACTTATTGAAAACTCACATTAATACTACTCACGATCCTCTCATCTGTAATTTATACAAATTGCACTGCCAATTTTGCAATCAAGGCTTTCGTTCTGAAAACAATCTTCGAATACACGAATTGCATTATCACGCAACTGCAGTAACTATCAATAATCAAAGAGTGACTGATTTTTTGAAAGTCTCCAACGGCGACACTAATCAATCTTTACAAACGATTTGCAATATTTGCGGCTTATTTTTTAACACGTATGAACGCTATCAGTTACATTATACGTATTATTATGAAAATCATATATTCTCATGTATATTTTGTAATAAGATATTCCACGGATGGTACATGCTACATCGTCATAACAAACTATACCATTTTAGAAATAGCTCAATATTTTATGAATATAAATGTTCGATTTGTTACGAAGGGTTCACGATTAAGTCACATTTTCAGGCACATCAGTCGCACGTACATTCGAACAAAGAACATATGGAATCGTCGATTTCGAATTTTACATTGAATTCTTTGCATTATAATAAAATGAGCAAGTCTTACATATGTTCCAAATGTAATGTCGAATTCTTCAACATAGCGGAACTCATGTTACACGTTGAACATTTTTCGAATCGCGGCAATTATCAGTGTTTAGATTGTCCCAGAAAATGTTATACGTTGTCAATACTGTGCGAACACATTAGTTTAAATCATGACGACAACGGATCGGTGAACGGGCACAAGTGTGATATTTGTGGCGAAATTTTAATATCTAGTATTTCGTTATTGTGTCATCGAAAGCACTTACATAGTGAGGGAGGAACTGAACAAGTCGTTTCCTTCTCATGTAAATATTCGAATACGAGCGTAAATATTAACGAAATCATTCATGACGATAAGATGGTTATCGATAACGAACCAATGGTAATTGTACACAATCCGACTTCCTCCATTAATCTGGAAAAATGTAATATCTCGTGTCCGATATGCGCTGTCAATTTTGAAAAAGAAGTATGTTTGAAGGAACACTTAGCCGAATATTTAGATTTCGGGGATTATCAATGCGGCGAGTGTAAAAGACGCTTCGCTAATTCAGAATTTTTAAGAAAACACGTAGAAAATCATGTGGCACCGGGTATGTCTTTTTCGGAATATTATTGCACCGTTTGTAACGAAAACTTTAAATCCTCTGATCTTCTCGAATCTCATGTTGCTCATTTACACGCCCGTGTTATTTTTAAAGATGTTTCGTCAAAGCCAATTTAA
Protein Sequence: MSHVETEDRKYIQQEKDSFVIDKNGKNRKRLVKHNDIKTSSKKQGRDISATMGKKSIVYCEICSLPYDSLNRLKFHKSSYTRNSNYFCSSCFSHSCSHMRLKISNKMSKSSRYRCHFCKRLFSKKKKLQGHLFHVHGKEIGINVEGDSFSIKHSATVSYSGVLRKKRMRQKTMMEYIVRPNEEDAKNTSENLNNSNDSSALTIIKQEVEWMDDQVNDQSSTDKIVSTISRTSQELNENKIRDQPFVKIHVDSNMMKALLGISNGDDCLEQSFLYSSNINSDSITNSSNSKPYALRSLNNSITVNNSKPSMIVRENNRSGSKVRRLLSMCKKCTILLVRYDDKLLTRLTSNSSKFTTSSSQVLKPVKRKLRKRRLPHRKSKNNELSSKNRFPLINVTNKSSVRSPPVKIRKRIAKSKANLSIALNFKRSTEFKQTRKKRSDPPRSLLKRFLLDLRKNESSKKANITNRKNSSSRKKSVSTEFQNKRSANAIAGLKEVKVSLVKLPEIKKELIVPEVDENATIGSRDETFPCTICKTSLISEKRLKKHMKKYHTAYISSICRARYASKRLLLKHYLQEHDMWVCKCCVCYQFFNSRLSLKRHLLLHCIKITLSKYDRPLSSKTIKCHLNTKRYKCKRSALKIMLQSQSTERREIDVINRKKPKENLNISRIENLTNQVSESKENNDDVLGKVYDRLGHQTVFVEITSPFKSNNTEVSPSRSNDLMEEPILDASYTANESIIYNSNEYGQIELIPHTNVIQSGVSDNNQSGPNIETIVNNRKYPCSVCGKQFQKQGSLFKHQRTYARSYNNFCEICGLLFSSKNLLKTHINTTHDPLICNLYKLHCQFCNQGFRSENNLRIHELHYHATAVTINNQRVTDFLKVSNGDTNQSLQTICNICGLFFNTYERYQLHYTYYYENHIFSCIFCNKIFHGWYMLHRHNKLYHFRNSSIFYEYKCSICYEGFTIKSHFQAHQSHVHSNKEHMESSISNFTLNSLHYNKMSKSYICSKCNVEFFNIAELMLHVEHFSNRGNYQCLDCPRKCYTLSILCEHISLNHDDNGSVNGHKCDICGEILISSISLLCHRKHLHSEGGTEQVVSFSCKYSNTSVNINEIIHDDKMVIDNEPMVIVHNPTSSINLEKCNISCPICAVNFEKEVCLKEHLAEYLDFGDYQCGECKRRFANSEFLRKHVENHVAPGMSFSEYYCTVCNENFKSSDLLESHVAHLHARVIFKDVSSKPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01514389;
90% Identity: iTF_01514389;
80% Identity: -