Basic Information

Insect: Vespula vulgaris
Gene Symbol: Bcl11b
Assembly: GCA_905475345.1
Location: FR997681.1:2743384-2773233[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.0099 0.62 10.1 0.1 2 23 168 190 167 190 0.95

2 6 2.5e-07 1.6e-05 24.6 0.9 1 23 523 545 523 545 0.98

3 6 0.00055 0.034 14.0 0.4 2 23 569 591 568 591 0.97

4 6 1e-07 6.4e-06 25.8 2.9 2 23 795 816 794 816 0.97

5 6 7.2e-06 0.00046 20.0 3.3 1 23 822 844 822 844 0.99

6 6 3.3e-05 0.0021 17.9 0.4 1 22 852 873 852 873 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.0099	0.62	10.1	0.1	2	23	168	190	167	190	0.95
2	6	2.5e-07	1.6e-05	24.6	0.9	1	23	523	545	523	545	0.98
3	6	0.00055	0.034	14.0	0.4	2	23	569	591	568	591	0.97
4	6	1e-07	6.4e-06	25.8	2.9	2	23	795	816	794	816	0.97
5	6	7.2e-06	0.00046	20.0	3.3	1	23	822	844	822	844	0.99
6	6	3.3e-05	0.0021	17.9	0.4	1	22	852	873	852	873	0.97

Sequence Information

Coding Sequence: ATGAGGATCAAAATGCCCGCGGTCAGGATCGCGCAAGCGGAAACTTCGCAAAGTAGTACGTCCCCAGACACCGTCCAATGCGGAGGTTGTAGGGCGTCCTATCCCCTTGGTGAGATCGTTCGATTTATCGAGCACAAGGTCAATCATTGTCGAAATACTCTCCAAGGCTGTCACAGTCCTCCGGCAACGGCAGCACCAGAGGACTCTGATCCCGAGGACGCCCTTGCCCTTAAAAGTACCGATCAGGATTCGAAACTAAATTCGGTCCCAAGTATCTCCGCGCCCATTAACAAAAGGGGTGGTAGACTTGAAAGTCCACCAACGCCTCAGGGTTCAGCACCGGATACCGGAAGTCCGATCGAGCTTCGAGCTAGTGCGAGTTCGACGCCGAAAAGACGAACGGAGGACATCGACGATGACAAGGAGGAACTTCCTAAGAAGCAGAAAACCGAGTCCGTCGATGCCGATACCAATACCGTCAATTCCGAACCAAGATGGCTGCAATGTTCGCAATGCTCGAGACGAGTATCGTCCGCGTGGGAGTTACTCCAACACGCGCAAAGCGTCCACGGTGCACGTTTGTATAGTTCGTCCTCGCCGTCGACGAATTCGTCGTCGAATACACCAGCACCGAGTCCACCCACGCCCACACCAACGCATGCGCATCACCTGAGTCCGCCAAATCACTTAAATTTAAGCGGCAAATCGAGCGGAAGTTCATCCGCGGCGAACAGTTCAGCTGGAACGAACACGAGTGGTAGCAGCGGAAGCCGTCAACAGCTTCAAACGTCGGCCTCGTTGGTTGGTGATCCGCTACATAGTTTTCTGAGGCTACCGCAACATTTGGAAAGAAGTTTTCCACCGATGTTTAGGCCAGATTTCCTTGCGTTAAATCCTTTGGCTGGGTACAGAGGTCTCCAAGAGTTACAAACGGCGACGAGGAACCTACAAAACCTCGGTGATCCGTTACGTGGTATGGACGGTTTAAATTTAGGTGACCCTCTCGTCCGTAGCTCGTTGGATTCATTAAACAACGCAAGAAATCTAGCGAATTTAGCCGAACTATCGCATGGCCGTGCATTGAGTGCACAGGCACACCCACCACCGTTAGAAGCCAACCTGGATTTTTACTCGGCGCGCCTAAGGAGCCTCGCTAATCCGTCCTTAGGCGCGGCTCCACCCAATAGCGGCAATCCCAACCCTAGCAACTCGAATCCAGCACCGCCTACTGTACAAAACGTTTTACCGGTACCTGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTAGAACCACCGAGTCCGGCTACTAACAATCCAGCCAATCTTACGCATAGCAATCATCAGAAAGAAAATTCGCCACCTTGTTACAGTCAAAGTCCTATCGGACATCACAATAATAACAATTCAACGGATAGCGAGAAAACTAGTCCGCCGGTAGCTTCTACTCCTATCATTGTCGATTCTGGTTCGGAAACAATTTACGCTTGCGAGGTCTGCGACAAGAAATTTCGATTCCAATCGAATTTGATCGTTCACCGGCGCAGTCATCGAGAGAAGGAGAGGCAGTATCAGCAGGATGGTGGTACGCAGGATGGACAAACGGGTCAGCAGGCTACAAGGTGCGAAGTTTGCGAATTAGAATTGTCTAACTTCGCTGAATTGAGGAAACACATGAGGAAGGAGCATCAGGAGACGTTGAACGTCGCCGCCAGTCCTCAAGGAAGCGTCGAGACCGTGCCGGACGATGGTTCGAGTTGCGACGAGAATATGGATTTGGACGAGGTCGAGGAAAACGATCAGAAGGCCGAAAGAGAGGACACCGAGGAGAATACGCCGGAGGATTTGAGTACTACGCAGGGTCAGAGCGGCGAAGAGAGCGGTGGTAGGATCGATCAGAAATCCGACAGTTTAGTCGGCGATCTCATGGAAAAATTTGGCTTGAGTAACATAGCCCAATACTCAGAAGCATACAGGCAAGCCCTTCAAGAGAATCATCGTGGTAGTTTTATAAAAACCGAGTCATCGTCGAGTTTAGCTAATTCCTTGAACAATAACAAGGAAAAGGATAGTGCCCTGTCACCTACGAACTTTAATTCTTCGACAACGCCTAACATATTTTCTGGACAAGGCTTTCCAAGATCGTCCGGGCCGGATTTCGGTGGTCTTTGGTTACCAAGTCCTCATTATTTAGAAAACAACGAATTTCGAAAAGCCTCGAAGGCGACAACGTCCAGTCTTGCACTGCAAGGTCTGCCGAGTCCTCTTTTGAAGAAAGAACGGAGTGGTAGAAACGATACCTGCGAATATTGTGGTAAAGTATTTAAAAATTGTTCGAATCTGACGGTTCACAGACGTTCGCACACCGGTGAGAAACCGTACAAGTGCGAACTTTGTTCCTACGCCTGTGCACAAAGTTCTAAACTTACAAGGCACATGAAGACGCACGGTAGACACGGTAAAGATACTTACAAGTGTCGTTTCTGTGAGATGCCATTTTCGGTACCTAGCACACTTGAGAAACACATGAGGAAGTGTGTGGTGGTAGTGCAACAGGGTCCTAAACTCGGTATGCCGTATCCCGGTAGTCAGGATGAGGATTCGTCTTTGAGCACCAAGGATACTTGA
Protein Sequence: MRIKMPAVRIAQAETSQSSTSPDTVQCGGCRASYPLGEIVRFIEHKVNHCRNTLQGCHSPPATAAPEDSDPEDALALKSTDQDSKLNSVPSISAPINKRGGRLESPPTPQGSAPDTGSPIELRASASSTPKRRTEDIDDDKEELPKKQKTESVDADTNTVNSEPRWLQCSQCSRRVSSAWELLQHAQSVHGARLYSSSSPSTNSSSNTPAPSPPTPTPTHAHHLSPPNHLNLSGKSSGSSSAANSSAGTNTSGSSGSRQQLQTSASLVGDPLHSFLRLPQHLERSFPPMFRPDFLALNPLAGYRGLQELQTATRNLQNLGDPLRGMDGLNLGDPLVRSSLDSLNNARNLANLAELSHGRALSAQAHPPPLEANLDFYSARLRSLANPSLGAAPPNSGNPNPSNSNPAPPTVQNVLPVPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPPSPATNNPANLTHSNHQKENSPPCYSQSPIGHHNNNNSTDSEKTSPPVASTPIIVDSGSETIYACEVCDKKFRFQSNLIVHRRSHREKERQYQQDGGTQDGQTGQQATRCEVCELELSNFAELRKHMRKEHQETLNVAASPQGSVETVPDDGSSCDENMDLDEVEENDQKAEREDTEENTPEDLSTTQGQSGEESGGRIDQKSDSLVGDLMEKFGLSNIAQYSEAYRQALQENHRGSFIKTESSSSLANSLNNNKEKDSALSPTNFNSSTTPNIFSGQGFPRSSGPDFGGLWLPSPHYLENNEFRKASKATTSSLALQGLPSPLLKKERSGRNDTCEYCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRHGKDTYKCRFCEMPFSVPSTLEKHMRKCVVVVQQGPKLGMPYPGSQDEDSSLSTKDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01454407;
90% Identity: iTF_01090212;
80% Identity: -