Basic Information

Insect: Vespula vulgaris
Gene Symbol: -
Assembly: GCA_905475345.1
Location: FR997689.1:2671167-2686205[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.86 54 4.0 0.2 3 23 247 268 246 268 0.96

2 10 2.4 1.5e+02 2.6 3.6 1 23 274 296 274 296 0.98

3 10 7.4e-05 0.0046 16.8 0.9 1 23 302 324 302 324 0.96

4 10 3.8e-05 0.0024 17.7 2.1 1 21 330 350 330 352 0.94

5 10 2.9e-07 1.8e-05 24.3 1.5 1 23 361 383 361 383 0.98

6 10 1.2e-07 7.5e-06 25.6 0.5 1 23 389 411 389 411 0.98

7 10 7.3e-06 0.00046 19.9 0.6 1 23 417 439 417 439 0.96

8 10 1.1e-05 0.00069 19.4 2.9 1 23 445 467 445 467 0.98

9 10 0.00059 0.037 13.9 5.2 1 23 473 495 473 495 0.98

10 10 0.00013 0.0084 16.0 5.8 1 23 501 524 501 524 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.86	54	4.0	0.2	3	23	247	268	246	268	0.96
2	10	2.4	1.5e+02	2.6	3.6	1	23	274	296	274	296	0.98
3	10	7.4e-05	0.0046	16.8	0.9	1	23	302	324	302	324	0.96
4	10	3.8e-05	0.0024	17.7	2.1	1	21	330	350	330	352	0.94
5	10	2.9e-07	1.8e-05	24.3	1.5	1	23	361	383	361	383	0.98
6	10	1.2e-07	7.5e-06	25.6	0.5	1	23	389	411	389	411	0.98
7	10	7.3e-06	0.00046	19.9	0.6	1	23	417	439	417	439	0.96
8	10	1.1e-05	0.00069	19.4	2.9	1	23	445	467	445	467	0.98
9	10	0.00059	0.037	13.9	5.2	1	23	473	495	473	495	0.98
10	10	0.00013	0.0084	16.0	5.8	1	23	501	524	501	524	0.98

Sequence Information

Coding Sequence: ATGATGACGGAGCCGGAACTTTGCCGGCTCTGTGCCGAGACCAAAGAGAACTTCATTGGTATTTATGACGCCGAAGGACAGAAATTAGCAATAGAAGCTAAAATCGCTAAATGTTTGCAAATTCAGGTATTAATAACAGATGGTTTGCCGCTGTCGGTTTGCATAGACTGTTGCGTTTTATTAAATCAGTGCAGTGAATTTTTTGAGAAGACCAATCAAGCGCAAGCATCTTTGAGGCAACTACTAATAGAGCCCAAGTCTGAACCGTCGACTTTAGAACCAAATATAGATTTTATTAAGAAAACTGTTGAATTTCCGAAAGAGGAAGAGATTGCAATCGATGAATGTCAACTATCGGATAATTACATTCATAATTCTGCTGTAGATATCACAAATACATATTTTAATAACGAAAATGAAAATGATTGTAATCAGCAAAAATATGAGACGGTAAAGGAAGAGAAATGTAAAATTCAAGTGAAAAAAGGTTCTCCCAAGCAGACTAAGAAAAAGGTTAAGAAAAAAAGTCAAATGCAAAGAATGGAAGATTTGGAATTATGCCTAACCTCTGATTTAAAAAAAGGACACAGTGACATTAGTATAAAATCTAATATGAAAGTTCCAGACAATTATATGACAGGAACAGATTCAGACTTGGAAATGATAGAAACCCGTGCAGCAGAACCACCAAAACCTGGACGTAAAAGAGGAGAAGGATTAGATAGATATCCTTGGTTATGTACTGATTGTAATGACAAGTTACCAAGTTTAGAAGCTTTGGAAGAACATCACGAAACTGTACATAATCAACAAGCAAAGTACATGTGTGTGCAATGTTGCAAAGTCTATGACAAATATTATGGTTTTCTTACTCATGTCAAAAGGCATAAAACTAAAGCAAAGTATAATTGTGAGGATTGTGGAAAATCATTTGTACATAAAAGAGTATTAGACTCGCATAAGGCAGTACATAGTGAGGAACGTCCATATGTTTGTCAAACATGTGGTAAAGCATTTAGACAACAAAGCGCTTTATACATTCATAGTAGATGTCATTTACCGGATACAATGAAAAATCGTTTTCAATGTGATCAATGTGATAAAAGGTTTTCTACTAAGCCTAATTTGGTTACTCACAAACGTATTCATTCTGGTGTTAGGAATTTTACTTGCGATCAGTGTGGAAAAAGTTTCATACAAAAAGGAAATTTAGAAGCTCATTTCTTAACTCACTCTGCAGACAAGCCATATAGTTGTTCTCAATGTCCAAAAGCATTTAAAACACCGTTACAATTGAAGAAACATGAAACAGTTCATACTGGTGCTAAACCACACCAATGTGCTGTTTGTGGTAGAACATTTAGAGAAAAGGGTACTTTGAGAGAACATCATAGGATACATACAGGTGCAATGCCTTTTACTTGTGAATTCTGTGGGAAATGTTTTCGTTTTAAAGGAATTTTAACGACACATAGACGACAACATACCGGTGAACGACCATATAGTTGTTTAGAATGTCAACACCATTTTACAAATTGGCCAAATTACAATAAACATATGAAACGTAGACATGGAATTAATACGTCTCACACGAAGCATTTATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAAGCTAATACTGCAGAAGATCCACTTTCCATAGCGCAAACAGAATCTACAACTGTACAGGTAATACAAGCTGTACCACACGTAACAGCACCTCAACCAATAGTCGTACAAGCTATACCAACAACAGCGATACAAACTTTCCAGGCAGATGTATCTGGTACCGTACAGGATACTGTATTTCGAGAAAGAAATGCAACATATTTTAATGCAATGCCAGCAGCTTTGCAAAACTTTTTACCCCCTAATTTACCGTATAACTTTTATAATATTTCAAACGTTACAGAAAACGATTTAATACAACATAGATAA
Protein Sequence: MMTEPELCRLCAETKENFIGIYDAEGQKLAIEAKIAKCLQIQVLITDGLPLSVCIDCCVLLNQCSEFFEKTNQAQASLRQLLIEPKSEPSTLEPNIDFIKKTVEFPKEEEIAIDECQLSDNYIHNSAVDITNTYFNNENENDCNQQKYETVKEEKCKIQVKKGSPKQTKKKVKKKSQMQRMEDLELCLTSDLKKGHSDISIKSNMKVPDNYMTGTDSDLEMIETRAAEPPKPGRKRGEGLDRYPWLCTDCNDKLPSLEALEEHHETVHNQQAKYMCVQCCKVYDKYYGFLTHVKRHKTKAKYNCEDCGKSFVHKRVLDSHKAVHSEERPYVCQTCGKAFRQQSALYIHSRCHLPDTMKNRFQCDQCDKRFSTKPNLVTHKRIHSGVRNFTCDQCGKSFIQKGNLEAHFLTHSADKPYSCSQCPKAFKTPLQLKKHETVHTGAKPHQCAVCGRTFREKGTLREHHRIHTGAMPFTCEFCGKCFRFKGILTTHRRQHTGERPYSCLECQHHFTNWPNYNKHMKRRHGINTSHTKHLSXXXXXXXXXXXXXXXXXXXXXXQANTAEDPLSIAQTESTTVQVIQAVPHVTAPQPIVVQAIPTTAIQTFQADVSGTVQDTVFRERNATYFNAMPAALQNFLPPNLPYNFYNISNVTENDLIQHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01233846;
90% Identity: iTF_01514333;
80% Identity: iTF_01514333;