Vpen009059.1
Basic Information
- Insect
- Vespula pensylvanica
- Gene Symbol
- lola
- Assembly
- GCA_014466175.1
- Location
- CM025336.1:2186343-2194604[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-16 5.8e-13 47.8 0.0 2 42 380 421 379 424 0.94
Sequence Information
- Coding Sequence
- ATGTCCATGCAACAATTTTGTTTGCGATGGAACAATCATCAACCAAACTTCATTTCTGTGTTCTCAAATTTATTAAATAATGAAACATTAGTGGATGTTACTTTAGCTGCCGAAGGCAGACATCTCCAAGCACATAAAGTCGTACTATCGGCATGTAGTTCGTACTTCCAATCGTTATTCACAGTTAATCCATGCCAACATCCGATCGTTATACTCAAAGATGTTAAATTTTCTGATCTCAAAATTATGGTAGATTTTATGTATTACGGTGAAGTTAACATTTCTCAAGATCAATTGCCATCGATTATTAAAACAGCAGAAAGTTTGAAGATAAAAGGTCTTGCAGAAATGCATACAGCTTCATTAACTAAATGGCCAAGTAGTAGTAGCGAACAAGGAGCTGCCGATCGTGGAGAATCCTGTTCTCCTAGTCCATCTCCTCTTTCTCCATCCTTCAGACGAAAGAGATTGAGAAAAACATCAACAGGATCGACATCTGGATCTGGAGACAAAACGGAAGAAATTAACGAGATTACATTGGTTGCTACTAACATTGTAAAACCTGAACCATTGATCGTATCTCAAGAAAGCAGCGAAAACGTAAGGCGACCGGTGAACACAAGCACGGAATCACAAGGAAGTATCGACGAAGATCAAATATCAATAATGAGTAACATGGAAAGTAGTTCTACAACAATGCCGGCACAAAGTGATACCACAATACAAAATGTGAATCAACAATCGAGTGGAAATGTAGCACAAAGTTCTGTTTCTTCTCAACCACCAGCACATCAAGGATTACAATGGACTATTATGGAGCACACATATCCACGTTTCGCTCTGTCCTCGTGTCAAACGAATCTGTCGATCCAAGCGTCATCAGCGTTTACAACGCCTGAAATAACAACTTCTTCGACGATCAGCGATCAGTACTCTGGTACCAGCACCACTGGTTCCAGTTGTGCCCTGACGAGTTATCCAAATTCCTCGTCGCATGGGGGGACATCATCGTTACAGCATACATCAGCATCGAGTGCTCCACCGCCATCCTCAACACAGTGTCCGAGTAACTGCCAAAGTCCCTGCGCCAGTCCCCAGACAGCGATTAAAAGGAAAAGATCAACAAATCCACAAGCTGATGAGAACTTTATTAGAGCTCTCGATGCAGTGCGATACGGTGGTATAGGCTTTTGTAAAGCTGCCAGAATGTTCGGTGTAAATAATCGAACGCTTTGGCTCGAGTACAAGAAACGTGGTTATCCTAATAATCGACCTAGCTTAAAGTCAAGAGTGAAACAAGAAGTTAATTCTTCACCACCGCCTGCGGCACAATCGGCCCAACCTGTAAATTCGCAAAGTCCAACGCCCATGGGGCCGCCTTCGACTCCACACAGTACACACAATACCCACAGCACTCATACTATGTTAACCACTCATAGTCCTCATACCATGTTAAGCGGTTATATCGATAGTAGGCATACAGACTATGCACTTCCAACTCTTCAATACAAATTGGCTGGATCAAAGAGAGGTCGTTTATTGATGCGTCAACCAAGAGTGAAAAAGGAACCATCTCATTTGTCTCCGGACAACGATCCAAATTCACCCCACATCGTTTCCTCGTCAATTCATCTGACATCACAAACATTGAACGTTCCTCAGTTGTCACGTACCTGGGAAGAATCAAGGAGTTCACCACCACCTTCTATCTTGGTCACACAATCGAATCTTTTAACAGTGACGACACCGACAAATCTATTGAGCGTTCCTCAACCATCCTATTTGACGAAACAACATTCGCATCCACTTTTGTCGAGTCAACAATCAAGTACCAGTGGCAATTACTTGATACAAAGGCAACATTCGAATCCTGAGTTTCCCGGAAGGACTACGAGTCCATCGATAGTAGTAGAACCAGCACCGCTTGTTAAAACGGAAGAGGATGTCAAAGATATTAACACAACGAGTAGAGAATCCAGAGAAGGTACGGGTGATCAACGATTAGGTCATTGTCCAGTATTACGTCCTGGTCCAGCTTTAGGTTGCAATCATTGCTGGAACACTATGGATGCTCATAGAAGAATTTTAAGAAGAAAAACCAAGTACCATTGTCCAGAATGTCAAATCAATTTATGCATCGTACCCTGTTTTCAAGAATTTCACGAACAACGTCGCGAATTGATATCGAAATTGAAACCCTTACCAAAAACTAGTTCGGTTTAA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSSYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNISQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSSSSEQGAADRGESCSPSPSPLSPSFRRKRLRKTSTGSTSGSGDKTEEINEITLVATNIVKPEPLIVSQESSENVRRPVNTSTESQGSIDEDQISIMSNMESSSTTMPAQSDTTIQNVNQQSSGNVAQSSVSSQPPAHQGLQWTIMEHTYPRFALSSCQTNLSIQASSAFTTPEITTSSTISDQYSGTSTTGSSCALTSYPNSSSHGGTSSLQHTSASSAPPPSSTQCPSNCQSPCASPQTAIKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEVNSSPPPAAQSAQPVNSQSPTPMGPPSTPHSTHNTHSTHTMLTTHSPHTMLSGYIDSRHTDYALPTLQYKLAGSKRGRLLMRQPRVKKEPSHLSPDNDPNSPHIVSSSIHLTSQTLNVPQLSRTWEESRSSPPPSILVTQSNLLTVTTPTNLLSVPQPSYLTKQHSHPLLSSQQSSTSGNYLIQRQHSNPEFPGRTTSPSIVVEPAPLVKTEEDVKDINTTSRESREGTGDQRLGHCPVLRPGPALGCNHCWNTMDAHRRILRRKTKYHCPECQINLCIVPCFQEFHEQRRELISKLKPLPKTSSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01539690;
- 90% Identity
- iTF_01514238; iTF_01514750; iTF_01514901;
- 80% Identity
- iTF_01514238;