Basic Information

Insect: Vespula germanica
Gene Symbol: stc
Assembly: GCA_905340365.1
Location: HG996532.1:4117146-4121530[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3 1.4e+04 -4.3 1.6 15 19 489 493 488 493 0.81

2 14 0.12 5.7e+02 0.4 0.4 4 10 522 528 521 528 0.95

3 14 6.9e-06 0.033 13.9 12.7 4 18 539 553 537 554 0.95

4 14 5.7e-08 0.00027 20.6 17.8 1 18 590 607 590 608 0.98

5 14 2.3 1.1e+04 -3.7 0.8 6 10 636 640 635 640 0.87

6 14 4.2e-07 0.002 17.8 14.3 1 18 646 663 646 664 0.98

7 14 0.48 2.3e+03 -1.6 1.3 5 10 693 698 693 698 0.96

8 14 2.7e-05 0.13 12.0 12.9 4 18 711 725 704 726 0.86

9 14 2.3 1.1e+04 -3.7 2.0 5 10 755 760 755 760 0.93

10 14 0.021 1e+02 2.8 11.4 1 11 766 776 766 788 0.88

11 14 1e-10 4.9e-07 29.4 14.0 1 19 793 811 793 811 0.98

12 14 3 1.4e+04 -5.9 9.2 10 19 858 868 850 868 0.79

13 14 2.6e-06 0.012 15.3 15.4 1 16 904 919 904 930 0.87

14 14 1.1e-05 0.055 13.2 13.6 1 19 936 955 936 955 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3	1.4e+04	-4.3	1.6	15	19	489	493	488	493	0.81
2	14	0.12	5.7e+02	0.4	0.4	4	10	522	528	521	528	0.95
3	14	6.9e-06	0.033	13.9	12.7	4	18	539	553	537	554	0.95
4	14	5.7e-08	0.00027	20.6	17.8	1	18	590	607	590	608	0.98
5	14	2.3	1.1e+04	-3.7	0.8	6	10	636	640	635	640	0.87
6	14	4.2e-07	0.002	17.8	14.3	1	18	646	663	646	664	0.98
7	14	0.48	2.3e+03	-1.6	1.3	5	10	693	698	693	698	0.96
8	14	2.7e-05	0.13	12.0	12.9	4	18	711	725	704	726	0.86
9	14	2.3	1.1e+04	-3.7	2.0	5	10	755	760	755	760	0.93
10	14	0.021	1e+02	2.8	11.4	1	11	766	776	766	788	0.88
11	14	1e-10	4.9e-07	29.4	14.0	1	19	793	811	793	811	0.98
12	14	3	1.4e+04	-5.9	9.2	10	19	858	868	850	868	0.79
13	14	2.6e-06	0.012	15.3	15.4	1	16	904	919	904	930	0.87
14	14	1.1e-05	0.055	13.2	13.6	1	19	936	955	936	955	0.97

Sequence Information

Coding Sequence: ATGGCCACTTGGGATGGCTCATGTCACGAACCTGAagattcaaattattttttttattcgggTCAAAATAGTGCCATCCCTAATGTAGAAAGTTGGACTTTTTATCCCAGTAATGGGAGCAACGTTTTTTTTCATAGTACTCATGCACCATATTCGCAAAATACTTCAATGATGTTGGGACAAAGTGAACATATTGCTTCCTGTCAAACGGATGCTAACTTTTCATCAGGTTCTCTAAATTCATTGCCTTTAAGAGACACTTGCCCAGATTACTTAAATGCTCCAGGCAGCACACAAGACTGTCAAGGTAACAGTAGGTCACAGAACATGTCAACATATTACTATCAAAGCAATCGACAAggaaaacgaattaaaaattataaagataacaataaatatgaatttccAAAAGAAGTTAGTCGCAACAATTGTAGCATTGTTGAACATTCCAATTTACATCCTACCGCGAGTGAATTTGTGCCACATGGGATTAAACATTATGCCAATCAAGCAAATACAAATCTACATGTTTCTAATTCAGAAGATTCTAAACTAAATTTGGCACAAGAAACATATGTTTCTGATAATGGcggtaaatataaaaagaaatataatacaaaaaaaaataattcatacaaatataaagaaatgcCAGAATATAACTTTCGgcaaagaaattcatttcaaaaTTCCTATAAAACACAACATGGTAGAAATTATAGAAAGTATCAAAATActtCTGAAGAACCAGCAAGTATGTCTAATCATCACAGAAATAATTCAACTACTGATGAAACtcaaaagaacgaaaaatttatgaatattaatacaaaCATCAATGCCAATAAAACTAATGCATCTAACATCGAAGAGAAACAGGAAATCAATGATCAAGCAAGAGCTAACAAAGAAAATACTGATGCCAGCAGCACTATAAGTCAAAACTGTGACCActtaagtaaaaataattaccaaCGACATAATTCTAATTTTGGAACACAACGTATTCCTGCTAAATATGGTAGAAAAGTTACCAATGATCGCAAGATTGGTagatatgataataattatcgtgagagaaaaaataactatcaggaatataataattataaggaAAGATATGAAGAAAGCAAAACAGATATTACTAAGGATAAGTATAAAAACAAAGATGTGATTCAAGAAACTAAAGAAGCAGAGATTGTGAATTGGAGACAAAAGGGAGAAGGTAATGATAGAAATAGTATTTCAAAAcgaaaacagaataaaaaacaTGAAGATGATGATGCAAGTCAAAGGGAAAGATTAACAGATCAATTAAATAGAGGACAATTAGAATGTTTAGTATGCtgtgaatatataaaacagaatGATTATATCTGGTCTTGCTCAAATTGTTATCatgttttacatttaaaatgtataaaaaagtgGGCAAAATCTTCCCAAGCAGaaaatgGTTGGAGATGTCCTGCATGCCAAAATGTAAGCACAACAATTCCTGAAGaatatttctgtttttgtGGAAAAACAAATATGCCTGAATGGAATCGCAGAGATATGGCTCATTCGTGTGGTGAAGTTTGTGGAAGAtctcgtataaaaaataactgCCCTCATAAATGTACTTTGCTATGTCATCCTGGATCTTGTCCATCATGTATAGCAATGGTAACAAAAAATTGTGGTTGTGGTAAAACATCACAAACGTTACAATGTTGTGCATTAACATTATTGCTATGTGATTCTGTTTGTGGTAAAATCTTAAATTGTGGAAAGCATACATGTGAAAAGAAATGTCATCATGGGGAATGTGAGCCCTgtgataaaattatacaacaagaaTGTTATTGtgggaaaagtaaaagagatgTAATTTGTCAATCTAACATATCTTCAACATATTCGTGTGAAGATACTTGTGAAAAGTTGTTAGATTGTGGAAATCATAAATGCAAAAAAACTTGTCATCCAAATTCATGTGAGCCTTGTGCACTTACACCTGAAAAAATCACAACATGTTATTGTGGACGAACACCACTGTCAGACAAAAGAACGACTTGTTTAGATCCAATTCCAACTTGCGAAGAAATATGTTCTAAAAGACTTAACTGTGGTCAGCCTAgTAATCCACATACATGTAAGATAAAGTGTCATCAAGGAGATTGTCCTGAATGTGATTTAACAACAGATGTAAAATGTCGTTGTGGTAATATGGATAGAGAAATCCCATGTAAAGATTTAACAACTAAAGCAGATGATGCACGTTGCGAAAAAAAGTGTATCAAAAAAAGATCTTGTGGGAAACATAAGTGTAATCAAATGTGTTGTATTGATCTCGAGCATATTTGTCCTTTGCCTTGTTCTAAAACATTAAGTTGTGGTAGACATAAATGTGAACAAACTTGTCATAaagGTAGATGTCAACCTTGCTGGCGCAGTAGTTTTGACGAATTATATTGTGAATGTGGTACAGCTGTAATATATCCTCCTGTACCCTGTGGAACTAGAAGACCCGTTTGTGATAGACCTTGTTCGCGTGACCATTCTTGTGGTCATGAAGTATTTCATAATTGCCACAGTGAACCATCATGTCCTCCATGTACTTATCTTACTGAAAAATGGTGTTATGGCAAACATGAACTTAGAAAAGCTGTCCCatgttattttaatgaaatttcatgtGGCTTATTGTGCAATAAACCTTTATCATGTGGAAGACATAAATGTATAACTATATGCCACCCTGGACCATGTGAAAAGCCAGGACAGCAATGTGTTCAACCATGTAATACATTAAGAGAATTATGTGGGCACATATGTGCTGCTCCGTGTCACGAAGGAAAATGTCCTGATACACCTTGTAAAGAAATGGTCAAAGTAACGTGCCAATGTGGACATAGAAGTACAACTAGAGTATGTGCAGAAAATTCTAGAGAATATCAAAGAATAACTAGCAATATTTTAGCTAGTAAAATGGCTGATATGCAACTTGGTCATTCTGTTGATTTAGAAGAACTTTTTGGACCAGGagcaaaaaaacaaaatcaactAAAAATACTCGAATGTAGCGACGaatgtaaattaatagaaCGAAATAGAAGATTAGCATTAGGACTTCAAATTGTTAATCCGGATTTAAGCGGAAAATTAATGCCAAGATACACTGACTATATGAAGCAGTGGGCAAAAAAAGATCCTCATTTTTGTCAAATGGTGCATGAAAAACTAACGGAATTAGTTCAACTCGCAAAGACTTCTAAACAAAAGTCAAGAAGTTATTCATTTGATAGTATGAATAGAGATAAACGTCGCTTTATTCATGAATCTTGTGAACATTTTGGCTGTGAAAGTCAAGCATATGATCTAGAGCCAAAAAGAAACGTTGTTGCTACTGCTGTAAAAGATAAGTGTTGGCTACCAAGTTATAGTTTATTAGAAATTGTGCAAAGAAACAATGGACAAAGAAAAGTTCCAGGTCCAATATTGAATACTTCAAAAGCTAACAATTCAACAAAgaCAATCTTAGCATTACCTATAACAAGAAGTCAGCAAATTGTACCAACTCCATCAACTTCAAAATCGCCAGAACCAGAAATagattattttgattataaaGGTTAA
Protein Sequence: MATWDGSCHEPEDSNYFFYSGQNSAIPNVESWTFYPSNGSNVFFHSTHAPYSQNTSMMLGQSEHIASCQTDANFSSGSLNSLPLRDTCPDYLNAPGSTQDCQGNSRSQNMSTYYYQSNRQGKRIKNYKDNNKYEFPKEVSRNNCSIVEHSNLHPTASEFVPHGIKHYANQANTNLHVSNSEDSKLNLAQETYVSDNGGKYKKKYNTKKNNSYKYKEMPEYNFRQRNSFQNSYKTQHGRNYRKYQNTSEEPASMSNHHRNNSTTDETQKNEKFMNINTNINANKTNASNIEEKQEINDQARANKENTDASSTISQNCDHLSKNNYQRHNSNFGTQRIPAKYGRKVTNDRKIGRYDNNYRERKNNYQEYNNYKERYEESKTDITKDKYKNKDVIQETKEAEIVNWRQKGEGNDRNSISKRKQNKKHEDDDASQRERLTDQLNRGQLECLVCCEYIKQNDYIWSCSNCYHVLHLKCIKKWAKSSQAENGWRCPACQNVSTTIPEEYFCFCGKTNMPEWNRRDMAHSCGEVCGRSRIKNNCPHKCTLLCHPGSCPSCIAMVTKNCGCGKTSQTLQCCALTLLLCDSVCGKILNCGKHTCEKKCHHGECEPCDKIIQQECYCGKSKRDVICQSNISSTYSCEDTCEKLLDCGNHKCKKTCHPNSCEPCALTPEKITTCYCGRTPLSDKRTTCLDPIPTCEEICSKRLNCGQPSNPHTCKIKCHQGDCPECDLTTDVKCRCGNMDREIPCKDLTTKADDARCEKKCIKKRSCGKHKCNQMCCIDLEHICPLPCSKTLSCGRHKCEQTCHKGRCQPCWRSSFDELYCECGTAVIYPPVPCGTRRPVCDRPCSRDHSCGHEVFHNCHSEPSCPPCTYLTEKWCYGKHELRKAVPCYFNEISCGLLCNKPLSCGRHKCITICHPGPCEKPGQQCVQPCNTLRELCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRSTTRVCAENSREYQRITSNILASKMADMQLGHSVDLEELFGPGAKKQNQLKILECSDECKLIERNRRLALGLQIVNPDLSGKLMPRYTDYMKQWAKKDPHFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNRDKRRFIHESCEHFGCESQAYDLEPKRNVVATAVKDKCWLPSYSLLEIVQRNNGQRKVPGPILNTSKANNSTKTILALPITRSQQIVPTPSTSKSPEPEIDYFDYKG*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01235401;
90% Identity: iTF_01513155;
80% Identity: -