Basic Information

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.9 1.2e+03 -0.6 0.0 1 15 37 51 37 55 0.85

2 4 0.0045 2.9 7.8 0.1 1 18 90 107 90 116 0.75

3 4 0.034 22 4.9 0.0 27 43 148 164 139 166 0.91

4 4 0.0057 3.7 7.4 0.1 3 44 174 219 172 221 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.9	1.2e+03	-0.6	0.0	1	15	37	51	37	55	0.85
2	4	0.0045	2.9	7.8	0.1	1	18	90	107	90	116	0.75
3	4	0.034	22	4.9	0.0	27	43	148	164	139	166	0.91
4	4	0.0057	3.7	7.4	0.1	3	44	174	219	172	221	0.84

Coding Sequence: ATGTCTAGCGATACAAAGATTGATACAGACTCAGAAATTgtagattataaatataataaagcaAAGAATTGTGATGATATCTCATACCTAGCAcgtaaaataagagaaaaggaagcaTTTTCTCAGGAGGATTTaaagCAATTACgtaatttaaaagtaaaattaatacatGAAGTTCCACCGCAACATCAAGTTGAAATACGTTCGGGAACTCATGTACCTTCTCGTGAAGAATTGGAACAGTTTATGGCATTAGCACCATTAAAAAAAGGTTCCTTTTCACCAGATGAGGATGATAAAATTGTTCATAATTGGAAACAATTTTGCAAGTTACACAATTGgaataaacataaatatagaGCGTTTTTAAGTCTCAGAGATAGCGATGGCAAGAAGTATACttgtaagaagaaagaaacaaaaaaatttgcacAATTTTTAGCAAATGGTTTACCAAATCGCACATTGTATAGTGTATACCATAGatttagaattttatatagttcttatttaaatagaagGTATACAAAAGAAGAGGATGTTATGATATTAAATCATATTGATCACAATCCATTCCTCGATGAAAAACGAAAGTTTGTTGATTTAGCAAAGGTTTTAAATAGAAGTAGAGCTTCTGTTTGGCGACGTTACcgattgttaaaaagaaacaaaaagtcaaagataaaaaattga
Protein Sequence: MSSDTKIDTDSEIVDYKYNKAKNCDDISYLARKIREKEAFSQEDLKQLRNLKVKLIHEVPPQHQVEIRSGTHVPSREELEQFMALAPLKKGSFSPDEDDKIVHNWKQFCKLHNWNKHKYRAFLSLRDSDGKKYTCKKKETKKFAQFLANGLPNRTLYSVYHRFRILYSSYLNRRYTKEEDVMILNHIDHNPFLDEKRKFVDLAKVLNRSRASVWRRYRLLKRNKKSKIKN*

Sequence clustering based on sequence similarity using MMseqs2