Vger003216.1
Basic Information
- Insect
- Vespula germanica
- Gene Symbol
- Xbp1
- Assembly
- GCA_905340365.1
- Location
- HG996530.1:10420039-10421877[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-15 1.2e-12 47.4 13.2 2 62 86 146 86 148 0.95 2 2 4.7 2.8e+03 -1.9 0.1 35 49 208 222 206 229 0.71
Sequence Information
- Coding Sequence
- ATGAGTGCATTGAAGAGCGTTGTCATCGCATTTCCTAAGGGTCTTACCAAAGGATCTGCTATCGTGCCCACTACCGAGCTTGTCAGATCAGTtccaaaattaaatttttcaacatCGATTTTAACCGAAAAAACAACAGAAATGGatataacgagaaaaatacCAAAGCAGGAAGAACTCCACGAGGAAAGTACATTTTTTAAACCAGATGTTTGTATTAGAGGAAAGAAACGTCGTCTTGATCATCTTACATGGGAGGAAAAATTGCAGAGGAAgAAATTAAAGAACAGAGTAGCAGCACAAACTTcgagagataggaagaaagCTAAATTGGATGAATTGGAAGAAACTGTCAAaacgttaaaagaaagaaacgatgtaCTGACGCAAGAATGCGCTTTATTAAAGTCACAAAACGAGTCGCTTATAAGCTCGTGTCGGTTGTCCTGTACCTTCACTGGGATCTGCAGTATCCCCACAAAACCCTCTGCCGCAGGGTGGGACAGTACAGTCGGCATCGTCCCTGACGCTAACACCAGGAGCAGCCATATTGCTGAAGATTATGACCCTCTACCTCCTCTCGAAGAACTGTTTGGAGATATCCAAGGGGATGATTACATCGACCGACTCGAAGAACTTGCAGAAAGCCTTCTTCGAGAAGTTACCGCAGAAGTGGAAGCAAATTCTCATAGATCAAATGAACAAGTGTCAGACGAAGAAAATACAGTTAAAAAATCTGACAATTCAAAAAGAATGGTGGGGCAGACATCAAAAAATGTGGAAGCCGATACAATCGCTGGTAGAAGCGTGAACGATTACGATACTTGGCATCTTAACTGTAGCGCAGACGTCACGCATGTTGTCCTAGATAATACACAAACGACACCGGTgtctattaaaaatgaaattgaagtTAAACAAGAACCCGACTTGAACGATATGGAAACAGTATATGGTACCTACGACGAAATAACAAattctattactattatttatccTGGCCAAGAAGATAACGTAGGCATTCAAGAATGCGTGCAAGAGATAAGCTCTGATAATGTTAGTCATACTGATGATGTAACATTGTTAACAACGCATCACTCTTATTCTGATCAATTTTCACCTGCTTACACGTGCACAGATATTATGTCTCCTTCGAGTATATATTCGGACAATGTCGATGCATCTTCTTCAATCAAATCAGATTCACATTTTTCGGATGGTGGTTATGAATCTCACAATTCCCCTAGCGCAGACGTacacaataaaaaagataatagtagtagtagtaataaaaataataaaaataacaataataatgtatgTTTAACCGATCTTTGGCACGAAAGTTTTACAGAATTATTTCCAATGTTGGCTTGA
- Protein Sequence
- MSALKSVVIAFPKGLTKGSAIVPTTELVRSVPKLNFSTSILTEKTTEMDITRKIPKQEELHEESTFFKPDVCIRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEETVKTLKERNDVLTQECALLKSQNESLISSCRLSCTFTGICSIPTKPSAAGWDSTVGIVPDANTRSSHIAEDYDPLPPLEELFGDIQGDDYIDRLEELAESLLREVTAEVEANSHRSNEQVSDEENTVKKSDNSKRMVGQTSKNVEADTIAGRSVNDYDTWHLNCSADVTHVVLDNTQTTPVSIKNEIEVKQEPDLNDMETVYGTYDEITNSITIIYPGQEDNVGIQECVQEISSDNVSHTDDVTLLTTHHSYSDQFSPAYTCTDIMSPSSIYSDNVDASSSIKSDSHFSDGGYESHNSPSADVHNKKDNSSSSNKNNKNNNNNVCLTDLWHESFTELFPMLA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01511955;
- 90% Identity
- iTF_01513916;
- 80% Identity
- iTF_01513916;