Basic Information

Insect: Vespa mandarinia
Gene Symbol: -
Assembly: GCA_014083535.1
Location: JACHAV010000111.1:51189-55928[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.014 1 9.5 0.7 2 20 155 173 154 175 0.93

2 14 0.052 3.7 7.7 5.1 1 23 209 232 209 232 0.91

3 14 0.0046 0.33 11.0 6.8 1 23 628 651 628 651 0.95

4 14 0.36 26 5.1 0.6 5 23 658 677 656 677 0.94

5 14 0.11 8 6.6 3.8 2 23 683 704 683 704 0.97

6 14 0.00021 0.015 15.2 0.6 1 23 892 916 892 916 0.94

7 14 0.023 1.6 8.8 0.6 3 23 922 943 921 943 0.93

8 14 0.058 4.2 7.5 3.9 2 22 954 974 953 976 0.88

9 14 0.08 5.8 7.1 0.3 2 19 1008 1025 1007 1028 0.90

10 14 7.7 5.5e+02 0.9 4.4 1 23 1035 1058 1035 1058 0.92

11 14 2 1.4e+02 2.7 1.8 1 23 1069 1092 1069 1092 0.92

12 14 0.022 1.6 8.8 0.0 1 20 1119 1138 1119 1140 0.95

13 14 0.28 20 5.4 4.2 1 23 1147 1170 1147 1170 0.96

14 14 9.1 6.6e+02 0.6 0.2 1 8 1179 1186 1179 1188 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.014	1	9.5	0.7	2	20	155	173	154	175	0.93
2	14	0.052	3.7	7.7	5.1	1	23	209	232	209	232	0.91
3	14	0.0046	0.33	11.0	6.8	1	23	628	651	628	651	0.95
4	14	0.36	26	5.1	0.6	5	23	658	677	656	677	0.94
5	14	0.11	8	6.6	3.8	2	23	683	704	683	704	0.97
6	14	0.00021	0.015	15.2	0.6	1	23	892	916	892	916	0.94
7	14	0.023	1.6	8.8	0.6	3	23	922	943	921	943	0.93
8	14	0.058	4.2	7.5	3.9	2	22	954	974	953	976	0.88
9	14	0.08	5.8	7.1	0.3	2	19	1008	1025	1007	1028	0.90
10	14	7.7	5.5e+02	0.9	4.4	1	23	1035	1058	1035	1058	0.92
11	14	2	1.4e+02	2.7	1.8	1	23	1069	1092	1069	1092	0.92
12	14	0.022	1.6	8.8	0.0	1	20	1119	1138	1119	1140	0.95
13	14	0.28	20	5.4	4.2	1	23	1147	1170	1147	1170	0.96
14	14	9.1	6.6e+02	0.6	0.2	1	8	1179	1186	1179	1188	0.88

Sequence Information

Coding Sequence: ATGGCTCTGGTtcgtgaatttaaaaaatcattgggAGCTGCAAATACTAATACGGACTTTAAGGACCTATCCAGATTTAGCGCAGAAGAGAACTTGATAAAACAAGAGCCACATGATAGAAATGATGCAAAGTCATATGATACTTGCGTGCCAACTATGAAAAAATCTGAAGACAATAACTCGATTAATATAACTGAAGATAATATCGGtgggaaagaaaatatctgtCCTCCGACTGAGAACCTCTGTAATGTAACGATTAATTCAATCGAAAGGATGTATTCTTCGATGGATCATGCGGAAACCGAAAATGTAAAGCGTATTCGTcaagaaaaagatttcattgtaattgatgaaaacaatgaaaacaaagaaacattaacaaagcgtaatgatattaaaagatcCAATAAAGAACAACGAAAAGATATACGAACaataagggaaaagaagattaTTGTTTATTGCAAAATATGTTTTTTGTCTTACGACAATTTGAATCAGCTAAAACggcataaaaatttttatgccagacaaaataattattcttgttctagTTGCTTCTCGAATTCTTGCTCTCATATTAGACTGAAGATTGATAAAAACGTGCcgaaatcttttaaatattcctgTCATTTTTGCAATCGAATGTttcgaaggaaaataattttacaaagtcATTTATTTCACGTTCATGGAAAGGAAATAAGAGTAAACGTTGTAAACgaatcattttcaataaatcaTTCAACTGTTTCATATTCTGGTACGtcaaggaagagaaaaatacgaCAAAAGACAATGTTGGAATACATTGTACATCATAATAAAGTAAATGCAAAGGATTCGTCTGAAAATTTAAACAACTCAAAGGTTAATAGCGCTTTACGTATAACTAAGCAAGAGAATGAATGGGTGGATAAGGAAGTGGGCAGATCGTCGAAGGACAAATTAGTTGCCAGTATACCTCAAACAAGGCAGAAgtcaaatgaaaatagaataaaacaaCAGCCATTTGTTAAAATGCACGCCGATTTGAACACGATGAAGGCTCTTTTAGGAATTTCTTACCTGTCTAATGACGACAATCTTGACTTTGAAAAATCTTTCCtatatagtagtaatattaatagtaagcGTTACGCATTGCGATCCTCAAATAAttctataaatgtaaataagcgttacgCATTACgatctttaaataattctataaaagtaaataatattgagGCAACCACAATTGTACGTAAAAATGATCAAAGCGATAATAAAGTTAGTAAACTTTTAAGTATGTGTAAAAAATGTAGCATTTCGTTGATAAGATGCGATGATAAATTGTCAACCAGATCGATTTCGAATTCTTCAATAGTTGCTGCGTCTTCTAAAGTTTTACAAccaattaatgatatatttcgTAAATGTGAATTATTGGAACGGAAAAGTGATAGTAACGTGTCACCTTCCAAAAATCCTTTTTCACGAAGTAATAATTCTAAAGATTTCATTAGGAACAATTCTTCTGTAAGATCTGTGccagtaaaaattaaaaaacgaatTACTAAGAGCAAACTAAGCTCATCTGTCATCTTAAATTCTAAGCGTTTTTCCAAGAAGCGTATTGATCGATGTCGAACGTTACTCAAAAAGAACAAGTTTGATCtaagaaagaacgaatttTTAGGAAAAGCAAATATTACGAATCCCGAAAATTCATCGTCTGAGAAGGAATCGGTTGCTACAGAATGTCAAAATAAACAGTCTGCGAATGCTATTGTTAGATTGAAGGAAGTAAAAGTATCTTTGGTGAAGTTGccagaaattaaaaaggaattgCTTATGCCAGGAATCAATGAGAATGCGACGGCCAGTACCAGCGATTTTCTTTGTACAATTTGTGATATGTTATTGACCAGAAAAAGACATTTGAAGAAACACATGAAGAAATGTCATACGGCATACATATCAAGCATATGCCGAGCACGATATGCTTCGAAACATCTTTTATTGAAACATTACTTACGAGAACACGATATGAGGGTACGCAAATGTTGCGTTTGTTATCAATTCTTCAATAGCCGATTATCATTGAAACAACATTTGCTTTTACATTGTATTAGGATAACGTTATCGAAAAACGATCGTCCTCTTTCGAGTAAAGATATGAAATGTCATTCCAATGTAAAGGGAAACAAGTGCAAGATATCtgcgataaaaatattgcCACGATCACAATCGACGGAACTTCAGAACGATCGAAACggaagagaaagggaacaTCAAGAGATTGATGATAGTAATCGAGAAAATCCAAAGGAAAATTTACTTGTTAGTAGTATTGAGAATCTGACAAATCAtgttaacgaaaagaaagaaattaatgtcGGTGGTcttgaagaaataaatgatcgtCAAGAAGATCAGACAGTCTCCGTTGAATTACCGAACCTATTGGAATGTAATAATACGGAAGATTCTCCTTCTAAAACTAATGATTTGATAGAAGAACCAATACCGGATACTTCGGCATATACTGCCGGTGAATTTACCATTTCTAATGCTAACGATGATATgcaaattgatttaattttgcATGGAAATGTGATTGAATTGGGTGATAGTTGTAATAATGAGTCTATGCCGGAAATAGATGCTACagtaaataagaagaaatatccATGTTCGATTTGTGAGACACAGTTTCAAAAAGCAGAAAATTTGTTCCAACACCTACGTACCTATGATCACTCCTTCAATAATTTCTGCGAAATATGTGGACTATTCTTTTCAagtaaaaagatattgaaGACACACAATGATACTGCTCACAATTTTGCCATCTGTAGTTTGTACACATTGCATTGTCAATTTTGTAATCAAGGCTTTCGTACTGAAAATAATCTTCGAATACACGAATTTCATTATCATGCAAGTGCAATAACTGTAAACAACATAAGATTGACggattttttgaaaattctcAACGGTCCATCTACTAGTACTAGTCTATCTTTAGCAACGGTTTGCAATATTTGTGGACTATTTTTTAATACCTATAAACGTTATCAGTTGCAttctatgtatttttataaaggtCATATATTCCAATGTACATTTTGTGGTAATATATTCCACGGATTGAACATGATACATCGTCATAACAAAATGTTCCATTATCCTAGAAATAGTTTAAcatcttataaatataaatgttcgaTTTGTTGCGAAGGTTTTGCTATTGAATCATCTTTTCTTGCACATAAATTGCACGTGCATTCGAATAAAGAACATATAGAATCATCGATTTCGAATCTCTCATTGATTTCTAtgcattataataaaatgagtaAGTCTTACGTATGTTCCAAATGTAATATTGAATTCTATAGCGTAGTCGAACTTTTAATACACattgaatattattctaattgtgGCAATTATAAGTGCTTAAAATGTCCTAGAAAATGTTGTACGTTGTCAATACTAAGCGAACACATTAATTTAActcataacgataataaattgatgttagGACATAAGTGTGGTATTTGTGGCGAAATTTTATTGTCTGATATTTCGTTCTTGTTTCATAAAAATCACTTCCATATTGATGACATGGAAAATCAGCAAGTCGTTTCCTCCTCTTATAAATCATAG
Protein Sequence: MALVREFKKSLGAANTNTDFKDLSRFSAEENLIKQEPHDRNDAKSYDTCVPTMKKSEDNNSINITEDNIGGKENICPPTENLCNVTINSIERMYSSMDHAETENVKRIRQEKDFIVIDENNENKETLTKRNDIKRSNKEQRKDIRTIREKKIIVYCKICFLSYDNLNQLKRHKNFYARQNNYSCSSCFSNSCSHIRLKIDKNVPKSFKYSCHFCNRMFRRKIILQSHLFHVHGKEIRVNVVNESFSINHSTVSYSGTSRKRKIRQKTMLEYIVHHNKVNAKDSSENLNNSKVNSALRITKQENEWVDKEVGRSSKDKLVASIPQTRQKSNENRIKQQPFVKMHADLNTMKALLGISYLSNDDNLDFEKSFLYSSNINSKRYALRSSNNSINVNKRYALRSLNNSIKVNNIEATTIVRKNDQSDNKVSKLLSMCKKCSISLIRCDDKLSTRSISNSSIVAASSKVLQPINDIFRKCELLERKSDSNVSPSKNPFSRSNNSKDFIRNNSSVRSVPVKIKKRITKSKLSSSVILNSKRFSKKRIDRCRTLLKKNKFDLRKNEFLGKANITNPENSSSEKESVATECQNKQSANAIVRLKEVKVSLVKLPEIKKELLMPGINENATASTSDFLCTICDMLLTRKRHLKKHMKKCHTAYISSICRARYASKHLLLKHYLREHDMRVRKCCVCYQFFNSRLSLKQHLLLHCIRITLSKNDRPLSSKDMKCHSNVKGNKCKISAIKILPRSQSTELQNDRNGREREHQEIDDSNRENPKENLLVSSIENLTNHVNEKKEINVGGLEEINDRQEDQTVSVELPNLLECNNTEDSPSKTNDLIEEPIPDTSAYTAGEFTISNANDDMQIDLILHGNVIELGDSCNNESMPEIDATVNKKKYPCSICETQFQKAENLFQHLRTYDHSFNNFCEICGLFFSSKKILKTHNDTAHNFAICSLYTLHCQFCNQGFRTENNLRIHEFHYHASAITVNNIRLTDFLKILNGPSTSTSLSLATVCNICGLFFNTYKRYQLHSMYFYKGHIFQCTFCGNIFHGLNMIHRHNKMFHYPRNSLTSYKYKCSICCEGFAIESSFLAHKLHVHSNKEHIESSISNLSLISMHYNKMSKSYVCSKCNIEFYSVVELLIHIEYYSNCGNYKCLKCPRKCCTLSILSEHINLTHNDNKLMLGHKCGICGEILLSDISFLFHKNHFHIDDMENQQVVSSSYKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -