Vman002178.1
Basic Information
- Insect
- Vespa mandarinia
- Gene Symbol
- ZFY
- Assembly
- GCA_014083535.1
- Location
- JACHAV010000043.1:1283776-1323412[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2.2 1.6e+02 2.6 0.9 2 23 445 465 444 465 0.94 2 14 3.9 2.8e+02 1.8 2.8 1 23 497 521 497 521 0.92 3 14 0.021 1.5 8.9 0.6 2 21 578 597 577 601 0.89 4 14 0.00057 0.041 13.9 0.5 2 23 616 638 615 638 0.96 5 14 0.14 9.8 6.4 0.4 1 23 657 681 657 681 0.92 6 14 0.021 1.5 8.9 0.1 1 21 729 749 729 750 0.95 7 14 0.87 63 3.8 0.3 2 19 772 789 771 793 0.83 8 14 3.2e-06 0.00023 20.9 1.8 1 23 814 835 814 835 0.99 9 14 0.00011 0.0079 16.1 0.4 1 21 841 861 841 862 0.96 10 14 0.00022 0.016 15.2 1.9 1 23 881 903 881 903 0.97 11 14 0.0052 0.37 10.8 0.1 1 23 908 933 908 933 0.94 12 14 0.00056 0.04 13.9 1.9 1 23 942 964 942 964 0.97 13 14 0.22 16 5.7 4.7 1 23 976 1000 976 1000 0.96 14 14 0.0044 0.32 11.1 4.3 1 21 1006 1026 1006 1031 0.94
Sequence Information
- Coding Sequence
- ATGGAAGGTTACGAGGATGACGACGACACACACTTTTGCATCAAGTGTCACTTGACGATACACGGATTGGAAAATTACGTTCGTCATCGTCAATCAGGATGCCGTCCGCCAGATGAGAAAGCAGAAACCGCACGAGAATCCCCATCAACGCCAACTACGGTCTCTTATCCTGAGATACTGAACGCGGATGCTTTCTTCAGTTCGTTGGAATTACAAAGTAGCTCGAAATCGAATCCCAGACGTACGAATACTCTATTAGAGAGTAACAGAAAATACAAGAAGAACGAACGCCGAAAGAAGGGACAGAAGAATCAACCGGATACCGAGGATTCCAAAGAAAAACTTCACAGTATGTTACCCGGTGATACCGACTTGGACGATTCCGAGGAACATCTTTGCATTCCGTCTTTCGTTGGGTTCCCGGATATCGTCACCTCCACCGCCAATAAATCTGCAACTACGGTAGGTCCAAATAAATTGAATCAATCGATTAGACATACGACGATGAACATCGAAGGATCGAGTTTTCCGATCAAACACGAGCCGGATAATTCTTTGGAAGGTCTCGTAACTGAATCGAAACAAGCCGATAGAAAAAGACCAGAAGAAAATCCAAGAATAGAGCAGGATCATCAAACATGGCTCGACGATACGATATTAGCCGATCTCgtggaaaataatgaaaataaggatTTGCCCAGGTACGAAGAATTCGAATATCAGCAGGACGTTGATTCGGACGATGATATATTAGACGAGGATCTTGCCGAGGATGAATCTTATTCCGAGTCCGATGACGGTGAAGATCAGGAAAGACCACCTAGAGGTCATACAGGTGGAAAATGGAAGCCTGGCTTGAATGATCTTCCTCAAGGTATACCTCAGTTACAGGACGACGAGGTTGAAGTTGAAGAGGATCAACATTCGGAACATCCGCCGCCCACTTATACCGGTGGCAAGTGGAGACCTACTGAATCATCTcagAAAGTCGAGGATTATCAAGGGAAGAATACAACGGGACAACCACCACCAGAACATACGCGAGGAAAATGGATACCGGGTGCGCAAACGGATATCGACTCGGGATATTGGTGCAATCCTTGCGGTAGGAAGCTTGCGTCGCGATTGGTCTATAACAGGCATCTTCTCTCTGATTTGCACGCTCGGAGAAGCATTCGAGAAATCGACGATGGTGTTCATCTACCGCGTGCCGCTACTTCGGCAAGGAGAATATTAACGCGACGGCAAATCGCACTAGCCGAGaaaagcaAACGTACATCTGAAGATAAAGAAGTCAAGAAGAATCCTcgtaaaagggagaaagaagtaCTCTCCTGTGAGATGTGTCACGCTCGCGTGAGAAAAGCTCAAATGGGTAAACATTTGCTTTCCCATTACCATTGTCGCGTGGCGGGAATAAATCCTCGAAGTCCAAGGGCGCGTCGGTTTCTCTTGGAGAACATGGCGAACGTAGTTCGCCAGTGTCCATTTCAATGTGCCTCTTGTCGTTTCTATTGCAACACTCAGGAAACGTTTTTGCTTCATTGGCGCTCGGATCTTCATTCCAGGACCTTAGAAAAAATCAGTGGAAGCTATCGATGTGGTTCTTGCGATTTCTGGTGTGCGGATGGGGAAACGATGGAAACCCATTTATTAAGCACGAGTCATTGTGACGTTGTTTCTATGATGAACGGTTCGGTACCTGTGGTAATCAGTCGTCAACAAGCATTGCCCTGTAGCAGCTGCAACCGTCAATTCCGATATAATCTGCAGCTGCGACTGCACGTCAAAGAGACAGGACACAAGGAAAGCTTCACAGCATCGGACGAGTATCAACGGCGTATCGTTTGCAGCATGTGCCCCCAAGTCGTGAGGTCCTTGGTATCACTTCAACGCCATCAGTTAACCTGTCACGTTAacaaggaaagggaaaagaacgAATTGGCCGTTTCCACGCAACCAACGCcttatttttgttcattttgcTCGATGAACTTTGCGACCGCTCAGGAAGCCGTTCTTCATAGAAGAACGTCCGCACACAAAGAGATTGTTAGAGCCCAAAAATCCGTTACCGAAGAGAAGTCCAAGAGCATGTTACGAGATTGTCCGCATTGCGACGAGAAACAATCGACTCTTACGAAACACAAAGATCATCTTCTCAGCAGACACCCTGACTTATGTCACAGGTGTCCACAGTGCGGAATACTCTTCGCTCTTTCGCAAGATGTAACAAGACACACCAGGGACAACAAGTGTaccaagaaaaaggaagaaaccgAGTCTAAATCGACGGTTATTAAGGAAGAGTGGAAATGCAAAACTTGTAATTTCTCGACGGATTCTCAAGCGGAATTGATATTTCACGAGGCTCTTCATGCGGGCACCGTTCAATCGAGCAAAGACGAggacgataataatggcaagTCGACCGTTAAATATCGTTGTCCTCTCTGTAAAAAAACTTTCACAAAAGTATCCCTAAGGAATCACATAAGAAGTCATACGGGTGAACGACCATTTTCATGTGCCAAATGCTACGTAACATTTGTAAGAAGATCTGACTTGAATGCTCATCAAAGAAATTGCTCATCGGTATCAATGGCTGGTTGGCCGAACGAGATTCACCGAAGAAGAAGTTTTATCTGTTCGGAATGTAATGATGCCTTTTACACCAAACACGCATTACGACAGCACATGCTTAGGCATGCCGGTAAGAAGTACAAATGTGGTCTTCCTGGTTGTCCTACGGTACTCCGTACAGCTTCCGAGTTGAAGTATCATCGTTCATTGGTTCACGACAGCACGTCCACTAATAGACGGTATCCATGCGGCCACTGTTCTTACGCGGCCAAAACGAAGACTCAACTTCGCAGGCATCAGGTCAGGCACGAAGACTCAACGAGCGTGGAGAAACTTGGATATCATTCCTGTCCTTACTCCGGTTGCAGTTTTAGAACCAGACTCAGCTTTCATCTAAGACGACACGTGCGGCTACACACGGGCACCAAACCGTACAAATGTCGTCATTGTACGTACGCCTGCAATACTCTGGAAAATCTGAGAAAGCACGTACTATCGAAGACCCTTCATCCCGGCAAGACGATCTACGAGTGCGACTTTTGCGTAACGAAAACAACCGAAATATTTTGCACAAACTTCGCCAAAGAATTGCGAGCTCATCTTATGGATGCACACAGCGACAAATTTCCAACCCCAGAACACGCCCGTAATTACATTCTCAATATGTTCGAAATTGTTCGCGATTCTGAACCTTTAGATGTGCCAAATTGA
- Protein Sequence
- MEGYEDDDDTHFCIKCHLTIHGLENYVRHRQSGCRPPDEKAETARESPSTPTTVSYPEILNADAFFSSLELQSSSKSNPRRTNTLLESNRKYKKNERRKKGQKNQPDTEDSKEKLHSMLPGDTDLDDSEEHLCIPSFVGFPDIVTSTANKSATTVGPNKLNQSIRHTTMNIEGSSFPIKHEPDNSLEGLVTESKQADRKRPEENPRIEQDHQTWLDDTILADLVENNENKDLPRYEEFEYQQDVDSDDDILDEDLAEDESYSESDDGEDQERPPRGHTGGKWKPGLNDLPQGIPQLQDDEVEVEEDQHSEHPPPTYTGGKWRPTESSQKVEDYQGKNTTGQPPPEHTRGKWIPGAQTDIDSGYWCNPCGRKLASRLVYNRHLLSDLHARRSIREIDDGVHLPRAATSARRILTRRQIALAEKSKRTSEDKEVKKNPRKREKEVLSCEMCHARVRKAQMGKHLLSHYHCRVAGINPRSPRARRFLLENMANVVRQCPFQCASCRFYCNTQETFLLHWRSDLHSRTLEKISGSYRCGSCDFWCADGETMETHLLSTSHCDVVSMMNGSVPVVISRQQALPCSSCNRQFRYNLQLRLHVKETGHKESFTASDEYQRRIVCSMCPQVVRSLVSLQRHQLTCHVNKEREKNELAVSTQPTPYFCSFCSMNFATAQEAVLHRRTSAHKEIVRAQKSVTEEKSKSMLRDCPHCDEKQSTLTKHKDHLLSRHPDLCHRCPQCGILFALSQDVTRHTRDNKCTKKKEETESKSTVIKEEWKCKTCNFSTDSQAELIFHEALHAGTVQSSKDEDDNNGKSTVKYRCPLCKKTFTKVSLRNHIRSHTGERPFSCAKCYVTFVRRSDLNAHQRNCSSVSMAGWPNEIHRRRSFICSECNDAFYTKHALRQHMLRHAGKKYKCGLPGCPTVLRTASELKYHRSLVHDSTSTNRRYPCGHCSYAAKTKTQLRRHQVRHEDSTSVEKLGYHSCPYSGCSFRTRLSFHLRRHVRLHTGTKPYKCRHCTYACNTLENLRKHVLSKTLHPGKTIYECDFCVTKTTEIFCTNFAKELRAHLMDAHSDKFPTPEHARNYILNMFEIVRDSEPLDVPN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01513808;
- 90% Identity
- -
- 80% Identity
- -